Array 1 15392-13604 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPDM01000423.1 Lysinibacillus sphaericus strain NRS1693 NODE_920_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 15391 29 100.0 36 ............................. GTGTTTGTCCTATCACTTTTGCACCTGCTGCGATCA 15326 29 100.0 36 ............................. GAAGACGATACTGTTGTTAGTAAAGCATTGGAAGCA 15261 29 100.0 37 ............................. GGCTTTCATTTCCTCGTCGGTGTATTGCTCGACTTGC 15195 29 100.0 35 ............................. CTTGAATGTGTTTTCCTCCATCATCTTCTACTACA 15131 29 100.0 36 ............................. TAGTTGGTCATTCAAAGATACAATACTTTCATCCAG 15066 29 100.0 37 ............................. ATAATGTCTGGTGACGGATTAACACCTTGACCGAACA 15000 29 100.0 36 ............................. AATATCGAGTGCTCACTTTTGACATCGCGGCAGAGC 14935 29 100.0 35 ............................. AATCGAAAATTAGGTGAGTTAGCAACCAAAACACT 14871 29 100.0 35 ............................. AAATTGTTGGTTGCTTGATGGGGCTAGCAATCTAC 14807 29 100.0 36 ............................. TGATGGGGAGAGTTGCCAGCGGTTTAGGTGTTTTTC 14742 29 100.0 36 ............................. ATTAAAGGGGTGAGTGAAGTTGTACAAGCTGTCTAA 14677 29 100.0 36 ............................. GGTTATTACACAACACGTCTTTACTCGGATCGTGAA 14612 29 100.0 37 ............................. ACAGAAACACTGGAATCGTAGTCTAAACAAGTAAACA 14546 29 100.0 36 ............................. GTAATTTTTCTATAGACATAAAAAACTGTCATTATC 14481 29 100.0 37 ............................. GTAGGGTCTTCTCTAACAGGTATCTCTGGCGCACTAT 14415 29 100.0 37 ............................. TTGAATTATCTTTAATTTAAAGGAGTGAGCTATTTGC 14349 29 100.0 37 ............................. GTATACATTGTCAAATTACCCATATTAGCAGCTGTAA 14283 29 100.0 34 ............................. CTAAGACCACCACTCGAAACCACTTTTTTATTCA 14220 29 100.0 35 ............................. TAATAATCTATATCGTTCCCGATTGTCAACATATC 14156 29 100.0 37 ............................. CTGGCTATCTTCTGAACATCATCTTTATCGGCCACGG 14090 29 100.0 37 ............................. TGTATTCGTCTGCGTCTGTATCATTATTTTCATCGCG 14024 29 100.0 36 ............................. GACATCAATATGACGGTCATTAATGCGCTTGTTACT 13959 29 96.6 37 ............................C TATGCTTCTTCATACGGCTACAATAACACGGATGCTG 13893 29 96.6 39 ............................C CTACTATTCGTCTTTATTATTTTCAGTTAGAATTTCTAC 13825 29 96.6 36 ............................C GACGGTACGAAAGAGGCTATTGATATTTCTATTGCA 13760 29 96.6 35 ............................C TTACTACGGAACTGGATACTTTGCACTCCCCCCAG 13696 29 100.0 36 ............................. CACGAATTTGCTCGGTGTAGCCGTTTGCCTGTAAAC 13631 28 93.1 0 ........C...............-.... | ========== ====== ====== ====== ============================= ======================================= ================== 28 29 99.3 36 GTTTTACATTAACTAAGTGGAATATAAAT # Left flank : CATAAAGTATTGAAAAAATATTTAACGTGGACACAAAACTCCTTATTTGAAGGAGAAATTACAGAAGGACTTTTAAAACAATGCCTAGCTGAATTAGCAACAAAGGCTAATCCGAATATTGATTCGATTTATGTTTACCGAATTGCCAATCCAAAAAACATGAAAAAAACTGTGTATGGAGTCGAGAAAGATTTTGAGAGCATGTTTCTATAGTCAACTATTATATTATCAAATGATTGGTCAAATAAAGAGAGAATCCATTGCATTCAAGGTGCTTCATCCAATTTCAATACAACAAATTCTCTCTTTTTTGTAGATTGCAGTGAATCATTTTACAACATAATATCCCTTCCAAGCATATCATATCTAGCTTTAAGGCACTTTGATTGCAAAGACAAATTTTTGAATCACAGATTGACTGCAAATATACCATATTGATCACAACGCACAACCTGTTAAAGCGTTGAAAAATAAGGCTTTTTTGAGTATGATAAAGGAGG # Right flank : TGAAGGTCTATAGAAGTTGATTAGTTATTAAAACTAAAATATCCTTACCCTATAAAAATGAACAGCGCCTACAATCGCTGTTCATTTTTTATTCCCCAAAACCGTACACATTCATTAAAATGTCAAACCTTTCATGTGAATGCATGCATATTGCAGCAATTTTGCACAAAATTGAATAACCCTAAGCATGTTCGGTATATAAATAGGGTACGATCATTTTTTAGGCTAAGGAGTGTGCAAATGGCTGTACTTGTGGTGAAGAGGAGTATTATGCATCGGTATCAAAGTATCGGGCAGGCAATTGAAGAGGCAATGCCTGGTGATATGATTGAGATTCGGGATGGGATTTATGAGGAGAGCTTGGATATTTCCAAGCGGCTGACGTTGTATGGGGTTGGGAATGTGACCATCAAGGGTGGCGTTTTTATTCGCTATCAAACCCATGTGGATATGCGGAATTTACGGTTTCGGCAAGGTCAAGGGCTATATATCAAAGGGGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACATTAACTAAGTGGAATATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 24707-25059 **** Predicted by CRISPRDetect 2.4 *** >NZ_JPDM01000423.1 Lysinibacillus sphaericus strain NRS1693 NODE_920_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 24707 29 100.0 36 ............................. GATGCGTTTACTGGCATGTTAGTCCTTCGAGGTAAA 24772 29 100.0 35 ............................. TGCATCATAGGTTTGTTGCCATTCATCTCGTAATC 24836 29 96.6 35 .....................T....... ATGGATATTGTGCGAAGTGCTATAGTACGAGCTTC 24900 29 96.6 37 .....................T....... AAAGAAACGAGTCTTTTCTTTAAATATTTGAATCACA 24966 29 93.1 36 ....................GT....... CAGAATAGGATAGGAAGATATTGTCCAACTGACGAT 25031 29 86.2 0 A.....T....C.....C........... | ========== ====== ====== ====== ============================= ===================================== ================== 6 29 95.4 36 GTTTTTCATTAACTAAGTGGAATTTAAAT # Left flank : TTTTTACTTAGCTGATTACGATTAGTGATTCTAACTAAACTTCATTTAACTTCCTGTACCCTCTTCAACTACATCTAATAAAAAACTCACAGTAACTAGTAGCAACCAAGAGCCTATATCCCTCCCCAAATATGAAATTCACATTGAAGGGTAAAAGCACTAAGTATACGCCGATTTCTCATGATGGGGAGGTAACACGAGTAAGGCAAATTTATAAAGCATGAAAATATTTAACGTAGAAACAAAACCCCCTATGAGCATGTGCTCGTCATGAACTATTACTTGAATGAAACGGATTCTCCCCTCTTTATATAAAATTGCAGTGAATCATTTTACAGCATTAAATCCCTTCAAAGCTTCCCATGCCGAGCGTTGAGGCACTTGAATGACAAAGGAAAATTTCTGGACTACCGATTGACTGCAAAAAAATGATATTGGTCGCAACATACAACCCGATAAAGCGTTGAAAAATAAGGTTTTTTTGATTATGATTAAGGTGA # Right flank : TCCTTAAAATTTTTTAAATCCTTAAAATTTATTGTATAAATAAAATTCCCTGTTAAAAAAACCAACAATAACCGAATTTCCTCGATCATTGCTGGTTCTTAAAATTTGCTTTATTTTTTTCGTTTCACAAAAACAATAGCAAAAATGGCTGCTAGAACTACTAGGATGGCAATCATCCATACTGTATTTGAGTTGGATGTAGTGTCATCTGCTGCGGCTGTTTGTTGTTCTTTTGGTGTGGCATTCGCTGACTGCACTTCTTTGGCGTCCTCTTTTGCTACTTGTGCGGAGCTAATTTGCACATATTGTAGAGTAGCTTCATTCGAGGCTGCTGCTTCGTGTTCATGGCTGTCGCCGTGCCCCTCTGCATGATCCCCGTGACTTTCTTCTTGACCACCGTCATGACCATGATGATGATCTCCTGCTGTTGTGAAAATAGAGCGTTCCAGTTGTTGACCTACCCAGTTTTTGGCATCTGTTGAATCAGCAAAGATGCGCGG # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCATTAACTAAGTGGAATTTAAAT # Alternate repeat : GTTTTTCATTAACTAAGTGGATTTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //