Array 1 2307518-2305271 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABPRS010000001.1 Clostridium perfringens NCTC 8239 isolate Clostridium perfringens, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 2307517 29 100.0 35 ............................. GTTAATACTATTATAGTTATTTCTGAGGCTTGGTT 2307453 29 100.0 36 ............................. GTTAAAAAAACCTCTTGATTTATAAATTTCATATAA 2307388 29 100.0 36 ............................. GCTAAACCAGCTTTTTTAAAATCTATATCAAAATGA 2307323 29 100.0 37 ............................. ACGGCAATGCACCAACATCAGCACCAGAAACAACTTT 2307257 29 100.0 36 ............................. AACCAATCTTGAGGAATTATAACTTTAGCATTATAA 2307192 29 100.0 35 ............................. TTACCATTAAATTTACCGTTTAACTCTCCCTCCAA 2307128 29 100.0 37 ............................. TTATAGAAAAAGTATAAACAAATTTAGGCTCTATAGA 2307062 29 100.0 36 ............................. TTCATTATAAAGATAGAAGAAAACTATCTATTTATT 2306997 29 100.0 36 ............................. ACCATAATTATAAGACTTACAAGACCTCTCTAACTC 2306932 29 100.0 37 ............................. TTGGTAATATCCCACGGAATACAAAATGGAAAAGCTT 2306866 29 100.0 37 ............................. TTTAATTGTAGATGCAATCATATCATTTTTATCCATC 2306800 29 100.0 36 ............................. TACTATCATGAAGGTAGAAAAGTTCTTGATGAACAA 2306735 29 100.0 37 ............................. AAGTACAAAAACATCTTAGATTATAAGCTAGGGGACA 2306669 29 100.0 36 ............................. ATATAATAAAGGCAAGTAAATAAAAGATACTTCTTT 2306604 29 100.0 36 ............................. TGCATGCTAGGGTTACTATGGATTATATTTATTTAA 2306539 29 100.0 36 ............................. GTTTATTCAATTTAACTTTACTATTATAACTACCTA 2306474 29 100.0 36 ............................. TTATGATTCTGCAATTCGAGAGCTTTTTGAGTACAA 2306409 29 100.0 35 ............................. TTGAATTTACCATCAAGTTCTCCTTCTAAAGCCTT 2306345 29 100.0 36 ............................. TTTTCTTAACATCAAATACCTTATTTTCATCACCTT 2306280 29 100.0 36 ............................. TTTAAAGGCTACGCTTCGCTATGTCTGCGACGCCAC 2306215 29 100.0 36 ............................. CCATTACAACCAATAACAGTCACAACACAATAAGTA 2306150 29 100.0 37 ............................. ATACAAACTATAAAAAAATAGCTAAGATTATTATTAT 2306084 29 100.0 36 ............................. AGCAAGTAAACTTGCTATATGATGTTTTTTATCTTC 2306019 29 100.0 36 ............................. TATCATACATAATATTACCGTCATTATCCAAGTTAC 2305954 29 100.0 36 ............................. ACTGTTGAATCAGGAATTTTAGACAATGCTTCTAAA 2305889 29 100.0 37 ............................. CTCATATCAGTTGGGTAGGATGGGAATCTATTACAAA 2305823 29 100.0 37 ............................. TCAGAATTTTTATTAATTTCACCTGAACTTTCTTCTA 2305757 29 100.0 37 ............................. GTTATTATTTCAACTTTTCTTTTTATCTCTTCATCCC 2305691 29 100.0 37 ............................. AGAAAGAAATCATTGACCCTATAGGGAAAAGCCAATT 2305625 29 100.0 35 ............................. TTATTCCCTAAAGCGTTCTTATTCCCTTTAGGAGC 2305561 29 100.0 35 ............................. TTATGTAACTAAGATTACAACTTTTATGAAATGGT 2305497 29 100.0 37 ............................. TTTATAATGCTCTCGTTGATCATCTGTTAGTTCAAAC 2305431 29 100.0 36 ............................. TTTTGATTTAACTCTACAAGCTTTAAGCAACTCTCT 2305366 29 100.0 37 ............................. TTGCTTTTTAAGACACATTCTAAATATGTGCCTTCAT 2305300 29 86.2 0 .................GAA....C.... | T [2305273] ========== ====== ====== ====== ============================= ===================================== ================== 35 29 99.6 36 GTTTTATATTAACTATGAGGAATGTAAAT # Left flank : AACTTAGAAATATAATATCTTTTGATATAATACCTCAATGTATTTATGAGAAAAATGAATCAGAAATTGAAAGCTTACTTGAAATTATAAATGATGAAAAAACAGATAAAATAAATAGAATAAAATCCATAGATAAAATAAAAAGTTTTACAGTATCAGTTGGGCAATATGATATTGAACTTTTAAAAAATAAACTTATTATGGAGTTAGAAGTAGGAAAGTATGAAAGAATTCCAGTATATAAATGCAATTATTCAGAGTTAGGATTTACTAGAAACACTAAAGAAGATGTATATGATAATTTCATATAAAACTAATTTTGCAGTAGATCTATTTTCTTATAATACTAGCTGTAACCAAGTAATATCAATGGTTAGAAGGAGATTTTTATTGATACACTAAAACATTACTGATGGTCTACTGCAAAATTTTAATATTTATGATAAAATTAACAATAGAGAATGAGTCTATTACTAGCTTTTAGCATTTTGAAATTTGGG # Right flank : ATATATAAAGCATCTTCAAACTTAAAATCATACTTTTAAACTTATAATTTTTTGTTTCAATAGCAAGTGAACCTAATAAAGATATATTTCCAACAATGTTTTGGCTTGCTTTATATACAACATTGCCATTTCAAAGTGTAATAAATCTTTTAGTAGGCTATAACATAGAGAGTTTGTAATACTTAATACTTCCAATATATATGATAACATTAAGCTTATTAAGTTATAAGGTACTTAAATTTAAACCTCAAAAAAATAAACAAGATAAGTAATTTTAGTTTTATAATAAGAATTAAAAAGTAAAATGGACATGATATCTGTCCATTTTTACTTAATTATTGATATATACTTATTAAATTTAGAACTTTGAATCTAATAATCTATGCATTTAGCAGTTTACATTTAATAGCTCCCTTGAAATTTCCTCAAATCTTTCATCAGATATACCAAGTTTTTTCTTAAATATATCATCATCAATTCTAGCAACAATAACCTCATTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //