Array 1 1043843-1044176 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849187.1 Acinetobacter sp. NIPH 236 acLsd-supercont1.16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 1043843 28 96.4 32 ..........G................. TTTAAAGCGTCGGACTGATGGTTTGGGTGAGT 1043903 28 96.4 32 ..........G................. AATAAAATCAGCTTTGCATTGATCAAGTTCAG 1043963 28 100.0 32 ............................ AAACAATACGATCTCGTAAAAGCTACCGTAAG 1044023 28 96.4 32 .......T.................... TTCATAAACAAAAGCCGCTGAAATAGCGGCTA 1044083 28 100.0 36 ............................ ATCAAAGGAGATAGGACGGACTTTAATTTGCCAGTC 1044147 28 75.0 0 .....G..T..C...A...T....A.T. | A,C [1044165,1044170] ========== ====== ====== ====== ============================ ==================================== ================== 6 28 94.0 33 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : AGTAAAGGCAATTTGTCTTTGCAGATTACTCATTTCAATCGTATCGGCATCGACAATGGTAATTTTACCTACACCTGCACGTGCCAACAGCTCGGCACTAGTACAACCGATACCGCCTGCACCGATTATTAGCACATTGGCGAGTTTTAGTTTTTCTTGTGCTTCGATATCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCGTTGCTTAGCTCAAATTCATTTTCTAAATGGTCTGACACGTGACTTGCTTCTTTATCATCAAAAGTGTTCATGATTTTAAGTCTATGTAGGTTCTGAGGAAAGTAATAAATTAGAACGAACACTTTTTTCTTTTGACAAAAAGCTATTTTTACCCCAATATTTTTCTTACTCTTTAACAGCTTAATAAAATCAATAAGTTACAATTTGGGTCAAAACTTTGGGTATTTACCCAATTTTCTTGATAAATCCATGTTTTAACTTATTTTATTTACTCTATTTTACT # Right flank : ATTCATCAATAAGAATTTACTACTGATTTAATTGGATGCTCTCACCAAAATAAATAAACTTCTAAAATGATATGCTTGTAGATTTTATAAAAACAATTTGTTAAATTGCATAAACGAATATTTATTGGATATATTATGAGAAAAAAAATATTAAAATCCGCTTTTGCTTTAATGATATTAACAACATTAAATTTAAATGCTTATGGAAATATTTATATCTCTATTCCCTCTTTTAAAAAACCTAAAATTTCACCTTTCACCAAAGCACAAGCTCTTAAAACTGATGAGTTTGAAACATCAACAAAACAATTATTGGAAGAAGGTTACATACCAATTAAATCGCAAACTTTTAATGGTCGAGATGATTTTCGAGGATATGAAAATGTAGTTGCTGCTTTAGAAAAAAGGGGGGATAATCTAGGTGCTCAAATCGTCTTATTTACAAATGAAAAACCAACTGGACAAATTGGCTACTATAATTTTTCAACTCCATTTGTATA # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1392845-1394732 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849187.1 Acinetobacter sp. NIPH 236 acLsd-supercont1.16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1392845 28 100.0 32 ............................ ATTTCAGTGATCAAGAAAGATTTTCCTTGATC 1392905 28 100.0 32 ............................ AAACTCATCACGGATTTTCGCTACGCTGGCAT 1392965 28 100.0 32 ............................ ACAAACATTGGCTCGCCCATCTTCAGGACAAA 1393025 28 100.0 32 ............................ AAACTCATCACGGATTTTCGCTACGCTGGCAT 1393085 28 100.0 32 ............................ ACAAACATTGGCTCGCCCATCTTCAGGACAAA 1393145 28 100.0 32 ............................ AAACTCATCACGGATTTTCGCTACGCTGGCAT 1393205 28 100.0 32 ............................ ACAAACATTGGCTCGCCCATCTTCAGGACAAA 1393265 28 100.0 32 ............................ AATATTTCAAGAGCCAAAGCCCATGCTTGTTG 1393325 28 100.0 32 ............................ ACTTTGGATTGTTGGTGTTGGTAGGTCATATA 1393385 28 100.0 32 ............................ TTGAGCGAATCGGCAACCATTACAGGGCGACT 1393445 28 100.0 32 ............................ CTTTGCGTCTACCATAGACACGCCAAGCGTAT 1393505 28 100.0 32 ............................ ACTGGATTGCGTGTAATCTGCAATATTATTAA 1393565 28 100.0 32 ............................ TATCAATACCCAAATAATATACTATCAATATA 1393625 28 100.0 32 ............................ GCAAAAGCTGCCCAAACCACAAGGAGCAACGT 1393685 28 100.0 32 ............................ TTTCATCATTTGAACGACAGCTTGGGCAGGAT 1393745 28 100.0 32 ............................ TGAGAATAAAAGCAGAGCAGTCGCTCAAATAT 1393805 28 100.0 32 ............................ AGTTGGCGCTGAGTGTTATTCATGGTCACTTG 1393865 28 100.0 32 ............................ ACGTTTAAAGGCGCATTTGATTCTTCAAGCAC 1393925 28 100.0 32 ............................ GTAAGAAGCTTGCCAACATATCGCTCGTTTAT 1393985 28 100.0 32 ............................ ATTAATGCAGGATTTAAACTAAATGAAGATGT 1394045 28 100.0 32 ............................ CAGCGTTTATGAGTGTCGAGCAAATCAGAAAG 1394105 28 100.0 32 ............................ CCTCATTGTGATGTTTGCGCTGTGCTAAGGCG 1394165 28 100.0 32 ............................ GATTAGCGGCGGAAAGGACTCGCAAGCATGTT 1394225 28 100.0 32 ............................ CAGAATACAGCAGACTATTTCGCTCTGTTAAT 1394285 28 100.0 32 ............................ GTGTTGAAAAGATCATTACGACCTATCAAAAG 1394345 28 100.0 32 ............................ CAGCACATACACAATTTTATTTTAGTGTTGTT 1394405 28 100.0 32 ............................ ATTAATGACTGGGCTTGGCGAAGTGCTATAGC 1394465 28 100.0 32 ............................ ACCCATTCTTTTTCCCGACATAGATCAATATT 1394525 28 100.0 32 ............................ TTACTAATCCACGCTTCTCCAACTGACGAATA 1394585 28 100.0 32 ............................ AGTGGATTTTTTTTTGTCAATGATGCGAAGAT 1394645 28 100.0 32 ............................ TCAATATCAGTCGGAAATTTCAATGTTTATGC 1394705 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 32 28 100.0 32 GTTCATCATCGTGTAGATGATTTAGAAA # Left flank : CCGTTGGGCCAAAGCGTTATATAAACAACTTGCTAAAGGTTTTGGCCTTGAGTTTACGCGTGATGAAGGAAAAAACTCTCACGACACTATTGCTGATATCGCCAACAGCTACCTCGATCATGGTAATTATATTGCCTATGGCTATGCAGCAGTGGCTTTAAATGGCATGGGAATTAGCTTTGCTCTCCCTATTTTGCATGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTCGTGAAAGATGCTTTTGTGATGCCACTGGCTTTTATATGTGCCGCAAAAGGATTGAATCAAAAAGAATTCCGAACGCAGCTTATAGAAATCTGCCAAGATCAAGATCTTTTGGATTACATGTTTAGCTTCATTACGGACATATGCAGTAAAATCAAATAAAATCATAAAATTAAGATTTATACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAACTGTTCATCATCGTGTAGATGATTTAGAAAATGAACTGCTTTCTTTACAACATCCAAGAAAAGTTCATCATCGTGTAGATGATTTAGAAATGGTCAGACATGGCGTAATTAGGTGCATCGACGTTCATCATCGTGTAGATGATTTAGAAATGACTTGCGAGGCGAGTTTGTGCGCGGTTGGGGTTCATCATCGTGTAGATGATTTAGAAATCTCTCATTGAATTTGCAGGGGACATCAACGCGTTCATCATCGTGTAGATGATTTAGAAAACGACCAACACCAAGCAAGTTTTTAAGACCATGTTCATCATCGTGTAGATGATTTAGAAATAAAGCAGCTCCAATATCAAGTGGTAATTTATGTTCATCATCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATCATCGTGTAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCATCATCGTGTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 1394860-1397587 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849187.1 Acinetobacter sp. NIPH 236 acLsd-supercont1.16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1394860 28 100.0 32 ............................ ATGAACTGCTTTCTTTACAACATCCAAGAAAA 1394920 28 100.0 32 ............................ TGGTCAGACATGGCGTAATTAGGTGCATCGAC 1394980 28 100.0 32 ............................ TGACTTGCGAGGCGAGTTTGTGCGCGGTTGGG 1395040 28 100.0 32 ............................ TCTCTCATTGAATTTGCAGGGGACATCAACGC 1395100 28 100.0 32 ............................ ACGACCAACACCAAGCAAGTTTTTAAGACCAT 1395160 28 100.0 32 ............................ TAAAGCAGCTCCAATATCAAGTGGTAATTTAT 1395220 28 100.0 32 ............................ CTAATGTAGTTTGGTCGCCAAATGTTCCATTA 1395280 28 100.0 32 ............................ ATTTCCATACAATTTGGGTGCTATGGCAACAG 1395340 28 100.0 32 ............................ TTCCGAAAATAGAGGCATAAGGTTTGTTAAGT 1395400 28 100.0 32 ............................ AGAATCATCAGAAACAACTCCACGACCAACAC 1395460 28 100.0 32 ............................ ATTAATTGACGCCCCGCTTCGTAAGTGCAACT 1395520 28 100.0 32 ............................ TCCTGCCTGGCCCGCTTGGATGTGGGCTAACC 1395580 28 100.0 32 ............................ GAATGGACGTGTTAAATGATAATGCTCACCGA 1395640 28 100.0 32 ............................ AGTTGTCACTCAAACAAATTTAGATGCTTATC 1395700 28 100.0 32 ............................ CAATCTGAATTTGCATAAGCAGCATCTTCTGC 1395760 28 100.0 32 ............................ CCTAGCAAAGCTGTTATATTCATGCTTTAATC 1395820 28 100.0 32 ............................ CATCATTCCAGAGCTTACAAACGAGCAGATCG 1395880 28 100.0 32 ............................ ATTCCTATTAGTTTAAAGAAAGCATTAAAAAT 1395940 28 100.0 32 ............................ TTCTTGGCAATTCCATAACGGCGTGATTCAAC 1396000 28 100.0 32 ............................ CATGTTAAAGACAGCTTTAAACACAATGACGA 1396060 28 100.0 32 ............................ ATTATTACAATTATCCTAAGTTATTGATTTTT 1396120 28 100.0 32 ............................ AAGCGGGCGCTGCAAATCCTGTTCAGTGGTCA 1396180 28 100.0 32 ............................ ATCCATCCGTACGTAAAGATCTATAGAAATCC 1396240 28 100.0 32 ............................ TGTTCAGTGGTCATTCAAGAACATCGCTAACA 1396300 28 100.0 32 ............................ TTGATCATCTGAAATACAAACCTCACCTTTTT 1396360 28 100.0 32 ............................ TTTCCACATTATGCAGCCAGAAATTTGCTGTT 1396420 28 100.0 32 ............................ TCAATTGCGGGTCAAGTTCTTTTTTCACTAGG 1396480 28 100.0 32 ............................ AGCTAGATAAGATTCAAAAGCAAGCAGACAAA 1396540 28 100.0 32 ............................ GCTAACAAGGCAAGAAACTACACATACCGTTT 1396600 28 100.0 32 ............................ GATAAGAAAACCTGCTCTTTTTAAACCCCAAG 1396660 28 100.0 32 ............................ TCTGTAAACAAGTCATACAAGACGCTGATCGC 1396720 28 100.0 32 ............................ ACCACCTGAAAAAGTCGTCTTTTCAAGAAATG 1396780 28 100.0 32 ............................ TCAAGAGGTTTCAGGATCTCGCTGTTTTAAAA 1396840 28 100.0 32 ............................ GTTTTCGTTGTACAAATAATCCCACTGGAGAG 1396900 28 100.0 32 ............................ TATTTGATCGTTCGTTAATTCAGGAATGAGGG 1396960 28 100.0 32 ............................ TGGTCTGAAAGCCTTTATTTACGGGCATGGAC 1397020 28 100.0 32 ............................ ATACTTTCAACTAGGCGCTTGAGGTCATTAAG 1397080 28 100.0 32 ............................ CCGACCTTAAACATGCTCACCTCATAAAGAGG 1397140 28 100.0 32 ............................ AGCAATTACACTAAAACTCATTGACATCGTGG 1397200 28 100.0 32 ............................ ATTTCAGCTATTCCCTTTGGCCATCCATCTGT 1397260 28 100.0 32 ............................ AACAGCAATCCCTCCCACTGTTGCTGTCAACC 1397320 28 100.0 32 ............................ TTGCATAGCAAGAGTAGATACCTTGTCAAACT 1397380 28 100.0 32 ............................ TTAACACGCTGAATAACTTGCTGTAATGCCAA 1397440 28 100.0 32 ............................ CTAAAGCCTACGGCAAATTTGAAGAAGTCAAA 1397500 28 100.0 32 ............................ TGAATTGCAGCACTATTAACATTAAAAAATTC 1397560 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 46 28 100.0 32 GTTCATCATCGTGTAGATGATTTAGAAA # Left flank : GATGATTTAGAAACAGCACATACACAATTTTATTTTAGTGTTGTTGTTCATCATCGTGTAGATGATTTAGAAAATTAATGACTGGGCTTGGCGAAGTGCTATAGCGTTCATCATCGTGTAGATGATTTAGAAAACCCATTCTTTTTCCCGACATAGATCAATATTGTTCATCATCGTGTAGATGATTTAGAAATTACTAATCCACGCTTCTCCAACTGACGAATAGTTCATCATCGTGTAGATGATTTAGAAAAGTGGATTTTTTTTTGTCAATGATGCGAAGATGTTCATCATCGTGTAGATGATTTAGAAATCAATATCAGTCGGAAATTTCAATGTTTATGCGTTCATCATCGTGTAGATGATTTAGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCAACT # Right flank : AGTAATATTATGAAAAAACCGACTAGATTACCCTACTGTGCATTTTGAAGCTCCACCACGAGATGGTTTAGAGCAACGTTTAGATGAATTTATCCAGTGGTTTAATACCAGCAGAACCAATACCCTGCTTGATCCACTGATTCGGGCTGGAATAACTCACCTGGTTTTTTTGACACCCCACCCTTTTGATGATTGTAATAGACGTATTACACTTACACTGACTGACTTAGCTTTAGCTCAAATGGATCAACAAAGTATTCGTCTATATGCGATGTCACCTGTCATTTTAAATAAGCGTAAAAGCTATTATGAGATTCTTGAAGCAACTCAAAAAGGTGGTTCTGATATTACAGCTTGGTTGCTTTGGTTTTTACAAGCATTCAATGACAGCCTTGAACAGACATTAAAGCGTATTGAAAGGACACTTTTAAAAAGTACATTTTGGCAGATTTTTTCGGAATTGGATTTGCATGAAGGACAGCGCAAGGTTTTAAATAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATCATCGTGTAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCATCATCGTGTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //