Array 1 145907-147311 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAJFBZ010000003.1 Bifidobacterium animalis strain MSK.23.138 EDOFHBPN_3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	====================================	=======================================	==================
    145907	    36	 100.0	    37	....................................	GACGATATGGCGCTCAGCGTGGCGGAGTGGGAGGCGG  	
    145980	    36	 100.0	    35	....................................	AAGACCGGCACCGAACGCGACTTCACCATGACCTC    	
    146051	    36	 100.0	    39	....................................	GCCCACCACAACGGCAACGGCGGAGGAACACGCGCCGAA	
    146126	    36	 100.0	    34	....................................	AAGCCGAACTCAATCACACGCATCAAAGCGAACA     	
    146196	    36	 100.0	    38	....................................	GTATTCGCCGTTCGAGAGGAATGAGAGGATGCTGTCAG 	
    146270	    36	 100.0	    34	....................................	TCGCCATTGGAGACGCGACGCAGGATACTATCCG     	
    146340	    36	 100.0	    34	....................................	ACGACAAGCCGCCGCCACCGATATTCACCTGCGA     	
    146410	    36	 100.0	    38	....................................	GGCCGCTTCGGTGACGGGCTGGTTTTTCCACCACACGC 	
    146484	    36	 100.0	    34	....................................	AATCCCAGCCGCAAGGTCTGATGCCGCCTGAAAT     	
    146554	    36	 100.0	    35	....................................	AAACAGGTCAATCAGCGGCGCAGGGAGGAGACGAA    	
    146625	    36	 100.0	    36	....................................	GAGTGAACAACTCACTGTGCGAACCATCGAACCGTT   	
    146697	    36	 100.0	    36	....................................	CGGTTGAGCAGCCACGTGGTGATACTGCTCGCGCCA   	
    146769	    36	 100.0	    38	....................................	CTTGCATCCAACGCGCACAGCATTGCATACGGGTATAG 	
    146843	    36	 100.0	    39	....................................	ATCATCCTCACGGAAATAGTGAGCATCCTCGAGAACCTG	
    146918	    36	 100.0	    36	....................................	GGCCGCGATAGTCCACGAGGCGAACGAAGGCGTTGC   	
    146990	    36	 100.0	    36	....................................	GCTCAAGACACTCACCGACCAGCTCAAGAAGACCGA   	
    147062	    36	 100.0	    36	....................................	CGCGATCGTCACCGACTGCACTGTGTTCGCACTGTC   	
    147134	    36	 100.0	    35	....................................	GCGACACCGAACGCCGCCGCCACAGTCGGGATGGC    	
    147205	    36	  97.2	    35	...................................A	AGGGCCAGCAACGTCGTGGAGATCCATCAGGAGGC    	
    147276	    36	  91.7	     0	...........T.T.....................A	|                                      	
==========	======	======	======	====================================	=======================================	==================
        20	    36	  99.4	    36	ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG	                                       	       

# Left flank :   ACGCACTTCAACGATGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCAATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAACCAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAGGTGCTGGGTGTGGGCGATGCGCTCGCAGACGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGGAGCTATCCCGTGCGAGGGCTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGTTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT
# Right flank :  AATGTACTCCGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCGATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCCGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTCGCCTTGCAGGCTGCATGCATGGAGGATATGGGTTATCGAGTAGATGGGACTGAAATATTCTTTACCTCGCACCATCGGATTGTTCCTGTTGAACTAAGAAAATCCGAT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [6,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.40,-6.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0.37   Confidence: MEDIUM] 

# Array family : NA
//