Array 1 45085-47637 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZWE010000007.1 Saccharibacillus endophyticus strain CCM 8702 NODE_7_length_325002_cov_119.858481, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 45085 29 100.0 36 ............................. GCTCGTCCTGGGCGTTATCTTCTCGCCAGTCCTGTA 45150 29 100.0 35 ............................. GTGTTCCGGTTTTGCCGGAGGATCCGCGGAACAGT 45214 29 100.0 36 ............................. CCTGATACGAGGAAGGTTGAGATTTGGAAGGATGGT 45279 29 100.0 36 ............................. AGCGAAGCGCCGGGGGCGCGCGGAGCGCGGTTACCT 45344 29 100.0 35 ............................. TTCGGCGCCTTAGCCGGCATTATGGCTACGTACGT 45408 29 100.0 35 ............................. AGTTTCGGATACACGACTTCAAGCGCCTTATACGG 45472 29 100.0 36 ............................. AAAAATTCATCGAATGGATCTCGAACGAACTCAAAT 45537 29 100.0 36 ............................. GGTGGCCGGAATCGTCGTTCACCAAACGCCAACGAG 45602 29 100.0 35 ............................. CAAATTGGTCGTCTCGCTGTCGAACACGATCGACG 45666 29 100.0 36 ............................. TTCGATGCGGCCTTGTCGATCCAAGCGAGTTTTTGT 45731 29 100.0 36 ............................. CGATCCTGGACCGTGGATTCGCGGATACGGCGTACG 45796 29 100.0 37 ............................. GCTCATGCAGGCGAGCGTTATCAACGACTACGGCGTC 45862 29 100.0 35 ............................. ATTAACGCCAGGCATGGCCGAGAACGTTTCCCGGT 45926 29 100.0 36 ............................. ATTCATAAGCCGGCCCGACGCCCTCACGTCACCGGA 45991 29 100.0 34 ............................. CAGATCCGATGCCGGACTACAATTCCGGTACCGA 46054 29 100.0 32 ............................. ACAGATGAAGAGTATGATGTTTCAGAAGAAGT 46115 29 100.0 35 ............................. TCGCGTCGCGGTGATTTTCGGGATATCCGATCCGT 46179 29 100.0 36 ............................. CGCGTTCTTCATGTTGTATAAGTGCGGTTTCGGTTG 46244 29 100.0 35 ............................. ACTAATGCGGACGAAGAAGATAAAGAGTCTACAGC 46308 29 100.0 36 ............................. TATTACATTTGTTTCTGCCGGAGCATTTGATGACAT 46373 29 100.0 36 ............................. CAAGCCAACGACGCACTGTAACGAAAATCGGGATCG 46438 29 100.0 36 ............................. CAGCGTCACCGACGATCGGCGCGCCCTGGTCGCCCA 46503 29 100.0 36 ............................. ATTTTTGAGTCATCGCGTTTACAGTCATTTCATTCT 46568 29 100.0 36 ............................. TGATGTATCCATCGTCAGCTAATACCAGGCATTCTT 46633 29 96.6 36 .......................G..... CAGGCTGACTACGAAGGCGTGATCAGCGTCAAAAAC 46698 29 100.0 37 ............................. GATTTTCCACTCTCTCACGATGGGCGAAATTCTGATC 46764 29 96.6 35 .....................G....... ATCTTTGTTGCCCGCCAGGATCTCCGAGCCCGCCA 46828 29 100.0 36 ............................. AGAAAAATCGCGTAGTGGGCAATAATAGTAGGAAAC 46893 29 100.0 36 ............................. CCGGAACACCCGCAGCGTCGACAATCGAAACACCCG 46958 29 100.0 36 ............................. TCATTTCGAAATGAGGAAGCGAATATGTTCATGTAT 47023 29 100.0 37 ............................. GATTTTCCACTCTCTCACGATGGGCGAAATTCTGATC 47089 29 100.0 36 ............................. CAGACAGATAAGGTGACGGTGGCCGCTCCGGATCCG 47154 29 100.0 35 ............................. ATTGCAGGATCGTAGCAGCCGTGAATTGCAGCGAT 47218 29 100.0 36 ............................. TGTAGAGCCGCTTTGCCACTTCGAAAACCGTCCACT 47283 29 100.0 36 ............................. TTTTTACTGCGTCACCCCACATGTCGATTCCTCCTT 47348 29 100.0 36 ............................. CGATATCTGCGTCCTGTTCGATCGCTCCGGATTCTC 47413 29 100.0 36 ............................. TCTTCTTCATCCCCTTCTATAATCATTCCCGCTCCC 47478 29 100.0 37 ............................. TACAAATTGGTTATCAAGCAGATCAAGGAAGAGTTTA 47544 29 93.1 36 ..................A.........A TTGCTACGCCCCGGTCCAGCCGTGCTCGTTCCTGCT 47609 29 75.9 0 T......AC...............A.GTC | ========== ====== ====== ====== ============================= ===================================== ================== 40 29 99.1 36 GTTTTATCTGAACGTAGTGGGATATGAAG # Left flank : GTACGAAGGGTTCGCGAAAGGCGAGAAGCCTTACTGGGAGCTGCTGCACGTGCCGAGCGGAGCCGGTATGAGCGAAAGCGGAGACTTCGGCGCTGCCAAGCTGGGATTGTGGGGATCGGGACATGTGGTGTCGCCGGAGGTGTTTGTTGATTTGGAATTGGAAGCGGGAGAGAGTAAAGCGTGGACGCGGACGTATCGGTTTTGGGCTGCGTAAGGAAGGCATGGCTTTTCTGTTTATTTGGTTGTGAACGGGTAGAGGATATCGTGTATCGTTTGCCGAATAAAAATTCTATGATTGTCGACTTTGTTTAAGACCGATTTTGCATTTTGCATCGAACCGGATTTGTGGGCAAATGGAGGTAAACCCTTGTCTGGTAAGGGTTTGAGACTCTATTTGTTAGGTTTACGATTACGTCATTGGCGGTTCGATGCAAAAGCAAGGAAGAGGGGAGGGGAGAAAGCCTTGTGTGGTAAGGGTTTTGAGCGGTTTTTTGGCGGGG # Right flank : CATGACATTGAATGGAAAAGAGGCACCCATAAAAAATTGAAGATGCCTCTTTCTGAAATGTTGGTTTTTCTAAATGAAGCAATACGCAAAAGCCTGTACAACACCAGTTTAATTGATCCTATTCATCTAGCCTGTTACTTTAGAAACTGTGGTTATTCGAATAGTATCATTTTTCTCTTCAGCAAACGCTTCTCATCCTTCCAACATGATATAGGTCAAGTTTTCAACGACATTGCGATCGTCTCAATATCATCATTTAGAAGTATGCTAAGCGCGAACGGCGCATGGTTTTTAATGTTGAAGGCATTGGAGTATGTAGAATAATCGGCAATGTATTCATTTGCGTAATCGAGTAATTGATAAGCTAATTCTAAACGCAATTTTTCAATAGAAGCACCGTCTGCGACGATGAATTCAATCTCTTTGATGTTTCCCGCGTAACGTCCATCTTCATCTATCTCGTATCCAAAGATGAGCTCGCACGCATTAAGCAGGAAAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 57168-60252 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAZWE010000007.1 Saccharibacillus endophyticus strain CCM 8702 NODE_7_length_325002_cov_119.858481, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================== ================== 57168 29 100.0 37 ............................. ATCCCGGAACCGATCCGGGAACCGGTGGTGGGAACGA 57234 29 100.0 35 ............................. AAGTTTCACGGGGAGCTGTGCGAGATCCTGAACGT 57298 29 100.0 36 ............................. CGCCTTGAAGCAGCTCGCGGTCCTTACCGCCTTCCA 57363 29 100.0 34 ............................. GATCACCACGGGCAAGCGCCGGCGGCGCCGCAGC 57426 29 100.0 36 ............................. GGAGCTGGAGCCGACGCTCTCAATGGACGAGCTGAA 57491 29 100.0 36 ............................. GGATATCGAAGTCGACGGCCTGGGCGAGTATACCGT 57556 29 100.0 35 ............................. ACGAACGACAGCTGTACCGTCATGCCGTCAATGCG 57620 29 100.0 36 ............................. ATAGCTGTGCCTCAGCCTAATGATTTTGTCGCTTAT 57685 29 100.0 36 ............................. AGTTTCACAGGCGGCTAGGGCTTGGACCCCCTAAGC 57750 29 100.0 37 ............................. GAGGGCTGATGCGTTTGTTGCTGCTATTCCGGTTGGG 57816 29 100.0 36 ............................. ACTAACGAGGAGCGAGTAAACGATGGAAGCCTTCAA 57881 29 100.0 37 ............................. TAGGACATCGTGAAGCTGTTGACGCGTTGGCGCCGTG 57947 29 100.0 35 ............................. ACGGAAAATCCGCAATTGATCCCCGAGGCACAACC 58011 29 100.0 35 ............................. AATGGAGTTGGACGCTTATTTGCGTATGCAGGCGG 58075 29 100.0 35 ............................. TACATTCTCTCCTTCTCACCTTGAACCGCAGCAGC 58139 29 100.0 36 ............................. TTCCATATGCGAGAATTCCGAATCTTCAACAAACCG 58204 29 100.0 36 ............................. GTCGGTCTTCCGCTCTCAAATTAATCATGTTCAATC 58269 29 100.0 35 ............................. ATGAGTGGAAACCTGATCCCATCAAACCGAAAGTA 58333 29 100.0 35 ............................. GTAGGAGCTACGACGACAATATCGGCAGCCGGATC 58397 29 100.0 35 ............................. ACTGGTCAGCATGCTGGAAGAGTGCCCGCTGGATG 58461 29 100.0 36 ............................. TTGGCCGGGCAACCGCTCGATCAGCGGCGTACGGTA 58526 29 100.0 36 ............................. TCCGGTGATCGAAGCGCTTGGGGCGTAAGTGTCAGT 58591 29 100.0 35 ............................. CTGGATAATCCGACACTACTAAGTATTGAAAAAGA 58655 29 100.0 35 ............................. TCCGGCAGCCGGGTACCGGTCCGGCGCGCTTCCGC 58719 29 100.0 36 ............................. TACAAACCACACGCTTCGATCTGAGTCTGATCGCCC 58784 29 100.0 37 ............................. CACGGACAATACCGTCAACGGATGCCGCGCGCTGCTC 58850 29 100.0 36 ............................. CGATTTCGGATATCTGGACCGGCGTTTTAGGTTTCT 58915 29 100.0 35 ............................. TTCCATGATAGAATCAAGAGTGGCCCGGACCTCGG 58979 29 100.0 36 ............................. CTCTTTGCTCAAACTTATTTTCCAGACCCGCTTAAC 59044 29 100.0 36 ............................. ACCGTTACAGCCACCGATCATAACGCGATCGTGACG 59109 29 100.0 36 ............................. ACGTACATCCGGATCGGCGTGTACTCGCTGAGGATG 59174 29 100.0 36 ............................. TCTTCCTGAAGAGAAGAAAACGATGGGCAAAGAAAA 59239 29 100.0 36 ............................. ACGGAACTTGTGCGCCTTGTCGGCAACGCAGGAGCG 59304 29 100.0 36 ............................. ACAGGTGGTTCGGACATCGTCGAAAAATCGATCCGC 59369 29 100.0 33 ............................. GGCTTGGACATAAAGATAACGTGGTTACTCTCG 59431 29 96.6 37 .............T............... CTAGATTGGGCGTCACAACCTACGACTTCGATCAATT 59497 29 100.0 37 ............................. CTGTATAATCCGGTCAGCGCAATAACTCTCGGGGAGA 59563 29 96.6 37 ............A................ TCTTAAACGCAAAAACGGCCCCGCTGGCGCGTGCCAG 59629 29 89.7 42 ..........................GGA TATGAAGCAATGCCCGTATCAAGCGCGCTGCCGAGCTGCTTT G,G [59651,59654] 59702 29 100.0 36 ............................. AATGGCGAATACAATCTTGATTTTCAAAGCAAGGAG 59767 29 100.0 36 ............................. TTAAATGGTGGTGACAACTTGACTACATCCGTATTC 59832 29 93.1 36 .........T..A................ GTCCGAGACGTTCCGCACCTTCTCTCGCTTGGCATC 59897 29 93.1 36 ............T.......A........ GCCGGATCGGCAGCTTGGAAAAAGGGAAGGCTCCCA 59962 29 89.7 36 .......T.A.......C........... CATGTCGTCCCAGATACGGCCAACGTCCTCGATCAA 60027 29 93.1 36 .......T........A............ GACTTTGCAGCTGATCGGAGAACTCGAGTCTTTGCC 60092 29 96.6 38 .......T..................... CATACTCCGCAAAGCATCGCCGCGCCTATCTCGGCAAC 60159 29 86.2 36 .......T.....A...A...T....... TTGCCTGGATGTGCCGGGCGGTTTGGTTTATCTCCA 60224 29 86.2 0 A............A.....A........A | ========== ====== ====== ====== ============================= ========================================== ================== 48 29 98.4 36 GTTTTATCTGAACGTAGTGGGATATGAAG # Left flank : ATGATCGGTGACGAAATTTATAAACCTTTTAAAGCGTGGTGGTAGCATGTTTGTAATTATTACGTACGACGTCGGTGAAAAAAGGGTAGGCAAAGTCTGCAAAAAACTGCGCGAATATCTGGATTGGACGCAAAACTCGGTATTCGAAGGCGAAATCACGAAAGGCACGTTGACGCGTTGTTTGGCCGAGTTGAAAACGATCATGGATGAAGAGGATTCCGTCTATTTGTATAAAGTAGAGAACCCGCGTAATTTGGTAAAAGAAGTGCTTGGAACCGATCGTTCTTTTTATACAATGTTCTTATGAGAAAGAAGTAGTGAAGTTCATTTGCATCGAACCGGAAAAAGAGCGAAAGTGGCTTGAACCCTTGATAGACAAGGGGGTGGGGGTTATTTCGTAGGGCTTACGTTTACACGATTGGCGGTTCGATGCAAATGTTGCCCTTGATGCCGTTACGAAATGGCTCAATGGTGCGGGTTTTGAACGGTTTTTGAGCGGG # Right flank : AAGCGATAAAATCTGCTAGACACTGTTCATCAAGTTGGTTGAGATATGAAGAAATCATTTTGATTCTTCAAATATTGTAATAGCTATAATAAGTGAGTACCTTGTCAACACTAAATGATGTTAGCTTTACATATTAGGTAGGCAAGTGGAGTGAATATAAATGGGTTGATATTGACCAGCTTGGAATCTGGGGTGAAAAAAATGAACCTTAACAAAAGCCGACCCGACCGCCTGATCTTCCCCTCCATCCGCTTATGCCAGCCGGAGTGGTATGGGGAGGGTTCATTCCAGCCGAAAGCTTGGGATCGCGCCGGATTGCTGGTTGTCGAAGGCGGCCAAATTACATTATCGCTTGACGGGCGTTTGCATCCAGCCGAGGCGGGCGATCGTTTCTGGATTGCGCCGGGTACGGAGGTGGGCGGACATTGGGGAGATGGATTCCGCTGCTCGCTGCTGCTTTTTTCTTGTCGGCGCATGGAGCGTTTTGGCGGACAGTGGTT # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACGTAGTGGGATATGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-25] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //