Array 1 20195-20952 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP020769.1 Staphylococcus lugdunensis strain VISLISI_33 chromosome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	====================================	========================================	==================
     20195	    36	 100.0	    40	....................................	CCACCTTTACTTTTCGTCATATCATTTTTCTTTTGAGCGA	
     20271	    36	 100.0	    36	....................................	TCCCAGTTTGGTAAGTTCATTTTTAATCATCCTTTT    	
     20343	    36	 100.0	    36	....................................	ATAATCAATTGTTAAATACATTTCATTTGGATTAAT    	
     20415	    36	 100.0	    37	....................................	TTCTGTATTTCTATTAACCAATTCATAAGTGTCATTA   	
     20488	    36	 100.0	    35	....................................	TTCATCATATCCTTTTATATAGTTTTTGTTTTGTT     	
     20559	    36	 100.0	    35	....................................	TGGTAAATCTTCTACACTGTCGACTGGGTCTTCTA     	
     20630	    36	 100.0	    35	....................................	TGTGCACTTTTACACTATTAGTTTAAATATCTCCA     	
     20701	    36	 100.0	    37	....................................	CTTTATATACAGTAGTTAATGACTTATGAAAGGTTTC   	
     20774	    36	 100.0	    35	....................................	CCAGTTGCTATTTTATTTGTCAACCATTTTATTAA     	
     20845	    36	 100.0	    36	....................................	TCGCTATTCAATAAGTTTTGTATTTGTTGTCTCATT    	
     20917	    36	  91.7	     0	..............................A.A..G	|                                       	
==========	======	======	======	====================================	========================================	==================
        11	    36	  99.2	    36	AATCAGAGAATACCCCGTATAAAAGGGGACGAGAAC	                                        	       

# Left flank :   GATTTTTTAGAAGTATCATGATACAATTTGATGCTTTTTTTGAGTCTCATAAACTTTATGATAAAGAAACATTGGAATTTTTAGAGCAAAATGTAAATATAGTTAATTATAAATTGAAAAGTGTCCGTTTTCATATGGAAAAGGTTAAAATTCCATCTTTTAAGGGAGAAATTGTATTTAAAATAAATGGGCCATTGCCGTTTTTACAATTAGTTTACTTTTTATTAGCTTTTGGAGAATTTTCAGGTACGGGTATAAAGACTAGTCTAGGTATGGGGAAATACAATATAGTTGATAAAAATCAAGATAACTAAAAAGTAGTTACACTTCATAGTCCATTTAAAACAAATCGAATTTATAGTATAATATATATAGGGAAATAACCTTTAAGTGTCAAATTTTTTGACAAATAAGGTATTACCTAGAGTTAGATTGTCAAAATTTTTGCCAATTTAAATTATCCTTCAAACTTAGGCAATACTGGATTGAAATTAATTGCT
# Right flank :  GATGTTAATATTAAGGTTTTTAAAAAACTAGATAATAACCAAAGCGCTAACTCTGCATTTGAGTCAGCGCAGTTTGTTTTATTATTTAAAAAATTTAAATGATTTTGACAATCTTAAAAAAGGTTCTGTTGATTTTAACAAGAATTAATGAAAAGTGTTGATAGTTATATAAAAAATTGGGAGATGTTGAAATTATGGAGGAAGTACTGGATTTAATAATAAATTTAGTTAAGTTATTTATTATAGTTCCGTATTGGTTGATTAGTGTTGGTGTAACTGCCTTTTTTTATTTTAAGCTTGTCGTGTTTATTCGGAATACATTTAAAGCTTTTTTTGATAAATACTTTTATGGCGAAGACAGTGACTCTATTCCTTATGCTGTAGGTCCATATATAATGATAATAACTGCTATGCTTATTGGATTAGGAATAGTTATGGTAATTGTTTTATTTTTTAATGCACTTTTAGGGCAAAATTTGTATACCCTATTATTTATAGTT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCAGAGAATACCCCGTATAAAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-6.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//