Array 1 8700-6152 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKE01000021.1 Vibrio navarrensis strain VN-0415 NODE_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8699 28 100.0 32 ............................ TCGACCAGGCGCTTGCCCTCCGGGCTGTTCAC 8639 28 100.0 32 ............................ CGGATCAGCAAGCAGTCCTTCGAGGACTTCCG 8579 28 100.0 32 ............................ GTCCGACAAGCTGGACATCAACGGCTCCATCG 8519 28 100.0 32 ............................ TTGCCGCGGCAGGACGCCGAAATTTATACAAA 8459 28 100.0 32 ............................ ATTGCGTTGAGAGAGCCGGACCAGTTCACCTC 8399 28 100.0 32 ............................ AAGACAACAGCCTCGCCTCGCGCTGCGCGTCT 8339 28 100.0 32 ............................ ATCCTGCTGATCTCTATCGTCTGACTCCCTTT 8279 28 100.0 32 ............................ TGTTATGTCCCCATCGTTTAGCTTTTTTAGCA 8219 28 100.0 32 ............................ TTTTCGCCAACGCCGTTCACTTCATAAATCGC 8159 28 100.0 32 ............................ AGCCTCTTTAAGCATATCGACGGTTAACTGCT 8099 28 100.0 32 ............................ ACCAGCTCATTCCGCTCAAAGCGCTTGATCAT 8039 28 100.0 32 ............................ TTTATTGCTTGCAAGATAAACTGGCACATCAA 7979 28 100.0 32 ............................ ATGATGAGTCGTCAGGGTAGCTATCAACATAA 7919 28 100.0 32 ............................ GCTCTTGATGTAGCCAGAAACAACCATCCCAA 7859 28 100.0 32 ............................ ACTTAGCGATTCACGATCTAGCGCCTTGTATT 7799 28 100.0 32 ............................ ATGCAGCAATAACAATAAAAGGCGAACGGTTT 7739 28 100.0 32 ............................ TCGCTGTTTTATTGCAGTATAGCACAGGCGTA 7679 28 100.0 32 ............................ ACCAGAAGCCCAGCAGGCAATCATCTGGAAAA 7619 28 100.0 32 ............................ ATAAAGCCGCGCTCCCACTCTTTCGGGATGCT 7559 28 100.0 32 ............................ TAAAAGGACTCAATCAGCTAAAGCGGCGTATG 7499 28 100.0 32 ............................ TTTAGCGAGTTTACTACTGGCTGCCCGTCTTG 7439 28 100.0 32 ............................ GTACAGTGATAGCCTGGGCATTGTGGCTGGCT 7379 28 100.0 32 ............................ CAATTTGTACCCCTGCTCCATGTCCATGTCGA 7319 28 100.0 32 ............................ AGATATTTAACTCACCGCCCGCCAGCCACTCA 7259 28 100.0 32 ............................ CAACTGAATAGTGTTAGGGTAGTTGGCCTGAG 7199 28 100.0 32 ............................ GCTAGTCTTTCCGGACTACATCTTGCCACCGA 7139 28 100.0 32 ............................ CATATCTCGGATACTGTCGGCTGTGCGGATAT 7079 28 100.0 32 ............................ ACGCAGAGAAGTTAGCCGTAGGCAAGTTTGCA 7019 28 100.0 32 ............................ TATTGGTTGCAAGCGAAGGCTGTTTATTAAAC 6959 28 100.0 32 ............................ CAACTAGCAGCCTTCTCGACCCCAAAGCGATA 6899 28 100.0 32 ............................ AACAGGAGTTTTCAGGCTAGAACCTGGCTATC 6839 28 100.0 32 ............................ TTGATAGGGCCGATGAAGATGAAACGGTGAAA 6779 28 100.0 32 ............................ TGCTTGTGGGTCAAAGTCTAGGTGGACAATGG 6719 28 100.0 32 ............................ CAATACACACTGAGCAGTGCGGGTGTCAGTTC 6659 28 100.0 32 ............................ GTCTCTGCCAGTGAAAGAGGTGGCGAAACGAA 6599 28 100.0 32 ............................ ACCCCCCAGTTCAACACCAACTAGTTCATTAA 6539 28 100.0 32 ............................ TTGATTGACGTGTCATTTGATGAAGACGGAAA 6479 28 100.0 32 ............................ TTCTTTCTCCCTCTTGAGAGATGCAGCCCTAT 6419 28 100.0 32 ............................ CGGCGACAAATTCCGCATAGTTATCACTGGCG 6359 28 100.0 32 ............................ GCAAGACAAGCGGCCAGTGAACACTTGGGTTC 6299 28 100.0 32 ............................ TACAACTGTTTGAGCAGACTCTAGCTTTTGCT 6239 28 100.0 32 ............................ GTATTGAGTTCCTGCTGAGTCTGGTCAATACC 6179 28 96.4 0 .......................G.... | ========== ====== ====== ====== ============================ ================================ ================== 43 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GATGTAAATTACGTAAGCTTTGTGCGCAAGCAGGTGAAATCGCCCGAGCGAATAGAGCGGGATATGCAGCAAAAAGCCGCGCTATGGGCCGCAAAATCCGGTAAACCGCTGGTGGAATGCCTAGCCGATTTGCAACAAAGCAAGCCGACAGCCTTATGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACGAAGCAGTGCTCACCAGACAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATGGTTGCAACAGGCGGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACATTCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : ACAAAAACGCCACGAGCAAAGCTGGTGGCGTTAACATCAATTCTAATCTAATCATAGCAATCGAGCATTTTAGATGCGCCCGTACCTCAAGCCGTACCCAGAGCGATCTTTGCTACAATTAAAAACCGTTTAAACCTTTATTTAATGCGTTCTAACATCACACCCGCTTCCATGTGGTGGGTGTAAGGGAACTGGTCAAACAGAGCGAAACGGGTAATGGTGTGGGTTTCGCTCAAGATTTCGAGGTTCTCGAGCAGGGTCTCTGGGTTGCACGAAATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCTACATCCATACCTGCGCGTGGAGGGTCGACAAAAATCGTATTACAGTTGTAGCTCTTCAAATCTACGCCCGCATCTTTAAGGCGGCGAAACTCGCGTTTGCCTTCCATCGCTTCGGTGAATTCTTCCGCTGACATACGGATGATCTGCACGTTCCCAATTTTGTTGGCGGCAATGTTGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 272013-270274 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKE01000001.1 Vibrio navarrensis strain VN-0415 NODE_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 272012 32 100.0 33 ................................ TATCCAATATACGCCCAGTTGTCGCCGTATTTT 271947 32 100.0 33 ................................ ATTCAATCTGGTGTGCAGGTTGCAAATGCGGAG 271882 32 100.0 33 ................................ TGAGCCGTCAAAGACGTTTATCTATCTCGATGA 271817 32 100.0 33 ................................ ACGCTTGACTTGTCGGTACTGCCGACCGACTCT 271752 32 100.0 33 ................................ GCAACTGACCGATTTAGATAGCGATGCTGTTTT 271687 32 100.0 34 ................................ AGAGCTTACTGCTAAGATGCAAGAGTTACAAACC 271621 32 100.0 33 ................................ TTTGGTATATCGCCAAGGTAAAACATTGGCTTG 271556 32 100.0 33 ................................ TACGCTCTCGGTACTTGCCAGCCAAGCATACGT 271491 32 100.0 35 ................................ GTCGGAAACTTCACAATCAACACAAACAAAGTACC 271424 32 100.0 34 ................................ CATTTTGTGTTGAGTTAAAGCGAAAAGACCATAC 271358 32 100.0 35 ................................ ACGCGCATAGCTTACAACCGTTTAAACATGCCAAT 271291 32 100.0 34 ................................ ATCTACTGCAACCATGTCAATGCTTGGTAATAAT 271225 32 100.0 34 ................................ CATTGACGTGGTAGTAAGTTTGTGCTGATAGGTG 271159 32 100.0 34 ................................ GATGGCTGTGAGGGCGAAGATGAGCAAGGAACTG 271093 32 100.0 33 ................................ GTCAAAGTAAGCCTGCTTTAGACCAACAGAACG 271028 32 100.0 35 ................................ CTCCTAGAGCACTACGATAAAGCAAAAGAAATATT 270961 32 100.0 33 ................................ AGTTTTCCAAACGTGCCGCATTGCTTCTTTTGC 270896 32 100.0 33 ................................ TATACCCGAATTTCTACGTTCAACGAATACGGT 270831 32 100.0 33 ................................ ATCGATTAGTAACCAAATGAAAAGTGGCGCTTA 270766 32 100.0 35 ................................ AAACATCAAGGTTTCCGCTGAAAGATTAGCAGAAA 270699 32 100.0 33 ................................ GTTCGTGAGTCTGAGGACGCAAGCTTTGCTACA 270634 32 100.0 35 ................................ AGTAACCATGACCGCGCCAGCTACCAGACCAAAAA 270567 32 100.0 33 ................................ ACTGGCGCAGAGACTGAGATTGGATTGGTTGAG 270502 32 100.0 33 ................................ CATCAAAGAAGCGATGTTATTTGCAAGCGAAAT 270437 32 100.0 33 ................................ TTTGACCTCTTTTGCCGCCTCCCAAAGAGAGCC 270372 32 100.0 35 ................................ ACGCCCGCCATTTCTACAGCGAGCTTGTTTAACTC 270305 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 27 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : ATTTGTGATCAAAAAATAAGGAGAGTGCGCCATGATGGTATTGGTCACCTACGATGTATCTTTTGCTAGTGAAGATGGACAAAAACGTCTCAGGCAATTAGCAAAGGTGTGTTTAAATTATGGTGTAAGGGTGCAATATTCTGTATTTGAATGCGAGATAGATGCGGCGCAATGGCTGCGCTTTAAAAATAAGATGTTGTCAATTTACGACCCTGAAGTCGACAGTTTGCGTTTTTATAAGCTCGGCAAAAACTGGCAAAACAAAGTAGAGCACCACGGCGCGAAAGAAGCGATAGATATATTCAGAGATACCCTAATTTTATAATCGCTAGGTTTGAGTTCTCAGTAAAACACCGGGGAGCTAGCGATTGCATAAGTTCTTTAAAAATAGAGCAAATATTTATTTTTATAGCTTTACACCAAATAGTTTTCTTCTACCGCGTAAAGTTAGCGGCAAACCATAATATATGCTAGTTTATACGTGCCTTTCACAATAGGCA # Right flank : TTTTAGTTCCATTAGTTAACTCTCTTTACGTACGTCGCGCCTCCCGCTTGATTCCGGACGACCAAGAAGGCCACAGCGACAGCGACGGTGACGGCATTCCTGATTATCTGGATGCCATCTCTGACTGCAACGTGATCCAGCAAACGGTAGCCGAGAACGACAGTTTCCTCATTGAAGGTCAACCAGGCGTTTGCTTGCGTAAAGGTGTCACCATAGTGGAAAACCAGACAGGTGGAGCGCGCTTGCTGGATAATGAGCTGACGGTCGACAACGAGGCGGACAACATTGGTGGTATTTTTGACTTTGTGGCGACCAACTTGCCACAACCCGGTCAGAGCTATCAACTGGTTATGCCGCAGCGTTTGCCTGTTCCGGCGAATGCCGTTTATCGTAAGTTCCGAGCCGATGTGGGTTGGGGCGATTTTGTTGAAGATGCTGACAACTCGATTGCGTCTACGTCGGGTGAAGCGGGCTACTGTCCGCCTCCGGGAGACAGTGTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.77 Confidence: HIGH] # Array family : NA // Array 1 8055-8262 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKE01000057.1 Vibrio navarrensis strain VN-0415 NODE_57, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 8055 28 100.0 32 ............................ ACTACCCAGAGCTGTGCTGTAGGTCATTCTCT 8115 28 100.0 32 ............................ GAAGCCAATCAACGTGCGAAGGACGCCGCATT 8175 28 100.0 32 ............................ TTGAAGTGCGACTACCCAAATACGCTGTAGAC 8235 28 92.9 0 .........C.................T | ========== ====== ====== ====== ============================ ================================ ================== 4 28 98.2 32 GTGCCCTGCTGCATAGGCAGTCAAGAAA # Left flank : TCATTGATGGTTAATGAAGGTTTGTTTGAGATCTCCAGTGTTTATGAGGTGCCAGATACTTCCGCAGAAGTAAGGTTTGTTCGCAACCAAACGATTAACAAGAGCTTTTTAGGCTCGAAGAAACGGCGAATTAAACGTAGCATGGTGAGAGCCGAGCTTTCTGGGGCTGAACAACGATTACCAGTCACTAATGAAGAGCGTGTCGTCGATAGCTTCCATCGAATTCCCATGTCTAGCGGCTCCTCAAAGCAGGATTTTATTCTGTTTATTCAAAAGGAATTCGTAGATGAGCGTGCTGAATGTGGCTTTAATAGCTACGGTTTAGCAACCAATCAAGAAAGAAAAGGCACGGTACCTGAGTTACGTTTTTAACCTTTTTTCTAAAGCTCTTTTTTAGAGAAGTAAAAACAAGTGCTTACAGAAGTAAGAAGAAAAAGGGCATTTTGGTGAATTGTGATTTTAAGCACGGGGAATCAGAAGGTTAGAGGCTATATTTTATA # Right flank : TAGGTCAGAAAGAAAGCAACCTACCTACCTGCTGAACAAGCAGTTAATAATCAAAACCATCAAGTTTTCTCTTGGTGGTTTTTTGTTTAAAAGGCTCCCCATGTATTTAAAAAGACTTGAATCTATTGATGTTAATTTCAATCACTATGAGGTAGGACTTGAACGATATGTTAGGTGTACTTGGGGCCTGAACATGTATAGGCATCATGTGTTTCGTGCAAACCTGCCAGATACATTTGTGTTGGAGATCAATCGAATCAATGAATTTTTGGGTATTGCGGTAGAAACCATTGATTAGCCAATGGGTAAATAGTGAACGGTTGCATATTTCGGAGCATTCCGATCAGTCATTTCCGGAATCGAGCGATCGCAATCACCGAAATACGCAACGGTTACATAAAATATTCCGAACGAGCTACGACAACTGTTCTATCACTCATCAAGGAAAATGTGCTGTGGCAGCATATAAATAGAAAAATTAGAAGCATAGGATATGTTTC # Questionable array : NO Score: 2.77 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCCTGCTGCATAGGCAGTCAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.90,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //