Array 1 222597-224217 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALUL01000038.1 Streptococcus agalactiae GB00904 ctg7180000004049, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 222597 36 100.0 30 .................................... CCGTTCAATCTGTTCTTGCTTTTGGTCATC 222663 36 100.0 30 .................................... AAGGGTGTTAGATGATAATACCTTTTTTAA 222729 36 100.0 30 .................................... ACACCGTTGCGGTTGTTGTCGGTCACTCAA 222795 36 100.0 30 .................................... TCTATTAACAATAGTTTTATCCAATTGTTT 222861 36 100.0 30 .................................... TGAAAACAAGCGCAAAGCTGTCAGAAAACA 222927 36 100.0 30 .................................... AGTTATCAATGCTATATGGTTTCTCATCTT 222993 36 100.0 30 .................................... GTTTAATTTTGAATAATATCATGTTTACTC 223059 36 100.0 30 .................................... TATGTCATTGTGATTGTGGGAATACTTGTG 223125 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 223191 36 100.0 30 .................................... TAATGTCTTTTCCTAGAATGTACATTTCTA 223257 36 100.0 30 .................................... AGTACTGCACTAGGAATTGTAGAGATCAAA 223323 36 100.0 30 .................................... CGTACCATCTATCAATTTACCGCAAGCTGT 223389 36 100.0 30 .................................... CCGATTATTTCCTACATAATACGCACGTTT 223455 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 223521 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 223587 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 223653 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 223719 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 223785 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 223852 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 223919 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 223985 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 224050 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 224116 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 224182 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 25 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //