Array 1 372733-368662 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAJ01000003.1 Photobacterium andalusiense strain CECT 9192T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 372732 32 100.0 34 ................................ TGATATTGCTTATTTTTTGTTGTGTTAGATTTAA 372666 32 100.0 34 ................................ CCAGCATGGTTCTTAGGTCGCAACCCATCTACAG 372600 32 100.0 34 ................................ AGACCAAGGAACAGGTCGCTTGTATGTGGGTCAG 372534 32 100.0 34 ................................ TAATATATGATTTGACCTGTATATCTGAAAAATC 372468 32 100.0 35 ................................ ATTAAAAAAAGAAAGCAACGCCCAAAAAATAGCAA 372401 32 100.0 34 ................................ ACTCTCAAAGAACACTTTCGATAGCCCGATTTTT 372335 32 100.0 34 ................................ AGGTACACATATAGAATATAGTGGCATTATTGTT 372269 32 100.0 33 ................................ TGTTGTTGCTGCCGATGAACGTTTAAAAAGTAA 372204 32 100.0 34 ................................ AACAGGACTCCCTCGCGAATATGGACGCCGATGA 372138 32 100.0 35 ................................ AAATTGTTGTCAGCACAAATCGTCGTAAGCATAGC 372071 32 100.0 34 ................................ CCGTAACCTCCCCATGAAATGTCATCGTCAAAAT 372005 32 100.0 34 ................................ ACTTCAACCAGCAGTAGGTGGTTTTCAGTATCAT 371939 32 100.0 34 ................................ TTTGTAAATGCAGGTTCAGCACCAACATCAGCCG 371873 32 100.0 33 ................................ CAAAGCAATTAGACATTACGCCTGAGCAATTGG 371808 32 100.0 33 ................................ TCTGTCGTGATCAAAGACATGGAAGAAAGCCAC 371743 32 100.0 34 ................................ ACCAACCTGCTAACAGAAGAAGCACCGAAGGTAG 371677 32 100.0 34 ................................ TCCATATCATCCATGATTGCGACTAACACACCTT 371611 32 100.0 34 ................................ TCCATATCATCCATGATTGCGACTAACACACCTT 371545 32 100.0 34 ................................ TAAAAATCCTTTAGGTAATAAATCAACAAGATTT 371479 32 100.0 35 ................................ TCATCAGTAATCAAAACAAGTTCAAAAGAACCGTA 371412 32 100.0 33 ................................ AGCCTAGACACAATCAACAACATGGCGTTGTAC 371347 32 100.0 34 ................................ CGACCGCCAGATAAGCACCAACGAAAGTGAGCAC 371281 32 100.0 34 ................................ ATCCGTGTTATGGGTGTGATTGCTACGGCTAAAA 371215 32 100.0 36 ................................ AATATATTTCTGAGCAAAACAACCTTGATGATTTAG 371147 32 100.0 34 ................................ TTGGTGGTCAGGCGCTTGCTAACTGCTACGGCGT 371081 32 100.0 34 ................................ AATATGACGTCACGAAAGGGGATTACGACATCGT 371015 32 100.0 34 ................................ AGATCCAGGCACAGGGAAAACCCGCGCAACATTA 370949 32 100.0 39 ................................ ACACAATTTTCTTTTGAATAGTATTTTTCGACCATCTTT 370878 32 100.0 34 ................................ ACACAGTTACCTATGTGTGTTAAGACGCCATCAA 370812 32 100.0 34 ................................ ATTGAGGTGTGGTAATACGACTGTGATAGCGCAG 370746 32 100.0 35 ................................ ATCAAAAGGTATGTAAACCAACAACGTGCCGTCAC 370679 32 100.0 35 ................................ CCAGAGTCCTCAATAAAGTGTGATGATGGATCTTC 370612 32 100.0 33 ................................ GATTGTCGATCTCTCGCATTAGCCGTACTGTGT 370547 32 100.0 33 ................................ AACATAGAGTTTAATCTGTGATTCAAGTTCTTT 370482 32 100.0 35 ................................ TTGTGTCTATCATCCGCAAAAATGAATAGATAATT 370415 32 100.0 36 ................................ CCCATTCAGCGTCTTTAGCTTTAACTATTTTATAGC 370347 32 100.0 34 ................................ ATGCCATTGAACTGATGTTAAACCGAGTTTACGT 370281 32 100.0 34 ................................ ATAAATCGGAGCAATCAAGGAATCAATAACAAGC 370215 32 100.0 34 ................................ AGGGTCAATGCTCATACCTAGCAACATATCAATC 370149 32 100.0 33 ................................ AAGCTCATTAGACCACCACCATAACGCCGCATC 370084 32 100.0 33 ................................ TTTTGCAAGGGCTTTGTAATCATTGAGTGCTGT 370019 32 100.0 36 ................................ ACTGCATAATCCCTTTGTTGTGTATTACAAATGTAA 369951 32 100.0 34 ................................ AGATTTGAGCATATCGTTCGGCACCATGGTTAAC 369885 32 100.0 35 ................................ CTCGGCATCGGGGTCGGGGATATACTGACAATCAG 369818 32 100.0 33 ................................ TTGGGCAATATCATCTTTACCGCCAGCACGAAG 369753 32 100.0 34 ................................ CCAAAAGAACTGAATCTTAGAACCGACTTGATAC 369687 32 100.0 34 ................................ ACGACCACGAATGTCGGGTAATCGTTTGTCGATA 369621 32 100.0 34 ................................ AGCCATGATTGAAGCCGCTTTATCAAAAGCAATC 369555 32 100.0 35 ................................ ATTAATGAAGACGGCAGTGTAACCGTATTCAAGAA 369488 32 100.0 34 ................................ CAATCATCAGTTGCTGACTCTGTCCATGCGTTGC 369422 32 100.0 34 ................................ ACTGTAGCAATGATTTGCTCGTCGCTAGATAGCG 369356 32 100.0 35 ................................ AGGTTTTGCGATACAATAACGTAATAGTGCGACAC 369289 32 100.0 33 ................................ CCACACCATATTGCTATTACTGCGACGCTTATC 369224 32 100.0 34 ................................ GCTTGATTTTGGCTAATGCAGATAATGGGTAACG 369158 32 100.0 35 ................................ ATCAAGCCGACCGTTAGTGTAATTCCATGACACGT 369091 32 100.0 35 ................................ ATTGCGAATGCTACAACATCACCACCGCTAAGGCG 369024 32 100.0 34 ................................ CATGATAACCCAGCTTTCAATAATTTACGGACAC 368958 32 100.0 35 ................................ TCGTTTTATGGCACAAAAAACCTTACCTCATGCAA 368891 32 100.0 35 ................................ TCTGTTGATAGTTGTACTGCTGAGATCATTAACTA 368824 32 100.0 34 ................................ TCATTCGGAGAATCAGCAAGCGCAAACGAACGAA 368758 32 100.0 34 ................................ CCTATCAGATATCTTAACGTTTTCTTGTAAGCGT 368692 31 81.2 0 ..A..............GA.-......C..G. | ========== ====== ====== ====== ================================ ======================================= ================== 62 32 99.7 34 GTCGCTCCCACCACGGGAGCGTGGATTGAAAC # Left flank : TTCTATCAACGTTAATTGAGAACGCTAACTATGATGGTATTAGTAACCTATGATGTCTGTTTAAGTGATTCATCAGGCAGACGTCGGCTGCGACAAATAGCCAAACTTTGTTTAGATTATGGTGTAAGAGTTCAATATTCAGTATTTGAGTGTGATATAGCACCAGATCAATGGGTCAAATTTAAAGCTAAACTACTGGCATTGTATGAACCAGAAGTAGATAGTTTACGTTTTTACCAATTAGGGAAAAATTGGCGTCACCGCGTTGAACATCATGGTGCTAAAGTTGCTGTCGATATATACCAAGATAACTTGATTATCTAATTCGCTAACCTTCTGTTCTCATGAAAAACCCACTAGGCTAGCTAAATTTTAATTCACTGATCATAAAGTTCTTTTACAATTTAGGATCTACTATTCAAAAAATCATCTTACTTTTAAATATGGTTAGCGCAAAAGAGGTATTCAGCGTAGGCTACGCCAGCCTTACCCAAAAGGGA # Right flank : ATCTCTCATCAATCAAGTATCACTTAGACAAACGGCTCTGAATCACTGTGCTAGCTAATTAATTGCTGATATTTTTCAGGAGTATCAATATCATAAAAGATCCCACTCACAGCGTTTAATTGTAAGTAATGTTCAGTGCCTGTTTGTAATACTTGCTTCATTTTAGCGGTAATCGGTAACGCTAAAATATGTGGAATTAACGCACTATCAATCAAAACTGGATGCCCTGTTTGGTGTTGATTACCTGCAAACACCACCCTAGCGTGACGAGCTTGCAATAACATTCTAAATACCTGCGGATCAATACACGGCATATCAGCATGAGTTATAAAAAACCGTGCACTGGTTACGGCTGTAATCCCCTTTTGAATTGAACTTAACATTCCTTGCTGATATTCAGCATTCACTACCACTTGAATAAGTGGCTGATGTTGATATCGCCGTATCAGTTCGTCGGCTCTATACCCTGCAACCACAATCACTCTGGAGCAAAACTGTAA # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCACCACGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCCCCCACGGGAGCGTGGATAGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.80,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,10.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 453099-452531 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAJ01000002.1 Photobacterium andalusiense strain CECT 9192T, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 453098 28 100.0 32 ............................ TAACAAAGCATTAGTTTGACCGCCAGCACCAC 453038 28 100.0 33 ............................ ACAAGTTGGCTTGATTTTTTTGATGTTAGTTAT 452977 28 100.0 32 ............................ GCATTAAAAGCAAAGGTCAGGTCAATATCAAT 452917 28 100.0 32 ............................ ATCGGCGCATAGCGCAACACTTTAGCGATCGG 452857 28 100.0 32 ............................ ACAAGCGCAAGATGCACGTACTTAACCCTAAC 452797 28 100.0 32 ............................ ATTTCGTTATCTTTCCAATCTAGCTGCTCAAA 452737 28 100.0 32 ............................ AATCAGTTGAGTGAGTTGGTTGTAATCACGTT 452677 28 100.0 32 ............................ TAACTTTTGCTAGGGCTTTTTTTTGAGAGTAT 452617 28 100.0 32 ............................ ATTCTCATGCCAAGCACTGGATCATTATCGCG 452557 27 85.7 0 ....................AA.-...T | ========== ====== ====== ====== ============================ ================================= ================== 10 28 98.6 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : ACACGCGTGTTACTGCTATTACGGCAATTCCGAGTGATATTAAAGGCTATCAGACTGTCAAACGCGTGCAGACTAAAAGTGCTAATAACAAGCGTAAGCGTTCGATCGCTAAAGGTTGGATCAATGCAGATGAAGCTATTCATGCGATTCCTGATACTGCCGAACGTAAGTTAACTTTGCCTTATGTTCAAATTCAGAGCTTATCTAATCAGAATGTTATGCGAGTATTTATAGAGCATAGCAAGGTAGTTACTGATGCTACGGATGGTGTATTTAGTAGTTATGGATTAAGTGCTACCGCAACGATCCCTGTGTTTTAAGTGTTGTTGTGATTATAAGAGTAAGAATGGGTTAGATGAGCATTCATTTAACCCTTTTTTTGTGTCTTTATTTCTAATGTTTAAAATCAACAGCTTATAAATAGTCGATAAAAAAGGGGTAAAAGGTGTTTTTTGGGGTTTTATTTAAATTAAACAATCGCTTATTATAGTTAAACTTCA # Right flank : GTTACTGACATGCTATAGAATATAACTCTACGCGCAATTTGTTATTTTAATCAGAAAAAGTAAATTAAAGACCATATGGTTATGCTTATTGGGTATAGTGGTGTTATGTGACCTGCGTAAGATATTTCGTTGATAAACCATATTATTCATATTGTTAAGAACTTATCCGTAAACCATTGAAGGGTAAATCCTTGATGTTTATCATGCAGCTACAAAGGATTTGTAGCTGTTTGGAATGAGTCATGAACAAAGAAAAATATAATAATATTGCGAATCATATTTTTAAAGCGGAAGCAGTCAGAGCCGCGGTTTATGATGTGATTACTCAGAGCATGACAGCATATAGAGCAGAGATTGTTCATGGTGTAACCCCTAATACTTTGAATCGCTATGTGAAAAAATTCAATTTTGAATTAGTTTATTTAAAGAGTATGGGGTTGAAAAAATTATAATGTTAAATCAAAGTCCAGTGCGAGCTGGACTTTCTTAGCAAACAGAAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 461654-463242 **** Predicted by CRISPRDetect 2.4 *** >NZ_FYAJ01000002.1 Photobacterium andalusiense strain CECT 9192T, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 461654 28 100.0 32 ............................ ACATCATCTTAATTTTTGGATTTTCTTGACGG 461714 28 100.0 32 ............................ AAGCATATAAAAATCGCTGAACCATTGGATGA 461774 28 100.0 32 ............................ AATTTGTAGTGCATCACCTCGACCTGATGTTG 461834 28 100.0 32 ............................ CTTTACCTCTTTACGTGTTAGCTTAGAGCCAA 461894 28 100.0 32 ............................ TCAGAGGATGTCGATTCACTTGGACTCGTGTC 461954 28 100.0 32 ............................ AATTGCTAACAAATCATCCAAACAAGGTTTAT 462014 28 100.0 32 ............................ AGCCGATAACGCAAAATCTTTCAATATACCTT 462074 28 100.0 32 ............................ TTAGTTATGATGTTTGTCAACGTAAGGTTTAT 462134 28 100.0 32 ............................ TATTAGATAGCTACAAAAAGGCTCAAAACTAC 462194 28 100.0 32 ............................ CTCAGAGAATGTTGATTCCTTGGACTCGTGTC 462254 28 100.0 32 ............................ ATTGGTAAGCAATACAATGAAAACTAACTAAA 462314 28 100.0 32 ............................ CAAAGCGTAATTTCATGATGGTGATCATCAAT 462374 28 100.0 32 ............................ GAACAAATCAACGTTAATCAAATTCCACAAAC 462434 28 100.0 32 ............................ CTTACTTAACGATTTAAACATTGCATCATCCT 462494 28 96.4 33 A........................... CCTGAACTTGTTGATTTCATTAAAGATAACTGC 462555 28 100.0 32 ............................ TGACAGTGACGGCTTAAAGGTTGCTTCAAAAG 462615 28 100.0 32 ............................ ATAATGGTTGAACAACCAACACGAACAATTAA 462675 28 100.0 32 ............................ AAGAGGTTTAAGGAGAACTAAGAAGATTTGCC 462735 28 100.0 32 ............................ TGTCCATACATTGAAATGAACGGGAATATGTT 462795 28 100.0 32 ............................ AATGGATAACAATCCTGCAAGTGGTAATGGAT 462855 28 96.4 32 .............T.............. TCGTAGCCACAACGACACGACGATTAAAGCTA 462915 28 96.4 32 .............T.............. ATTGTGCGAGCATCAACCAATGAAATATAACT 462975 28 96.4 32 .............T.............. TTTCATACGTTGAATAACACGCTGACTTATTA 463035 28 96.4 32 .............T.............. ACATGTATATATACGGAAATAGGCGTTTGGTG 463095 28 96.4 32 .............T.............. GAACCGCTTTATTTGAATATTATCACTCATTT 463155 28 100.0 32 ............................ AATATCATCACGCTTTAAATACTGAGTAACAG 463215 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CAACTTCATTAGCTGAAAATAATGGCGTTCCGCCACCACCGCAAAAACCGACTAGCACGCCAGCTTTAGCTAATTCACGCATTGCTGCTTGAGTAATGGACGTGCCTGTTCCGAGCATTATGGCTGTCGTGTTTGCTATGGGGATATTCCAATATAAAGATTGCTTACCTTCGTCAGTGACATATTCAACTCGTCCACCATTCACTAACACACGACAATGTTGTAAATAATAAAGATTGGCACGTTTGGAATGAATAATTGTTTTTAGCTCACTCGGTGTGAAAGACTTAGCGCACATAGCAATCACCAACTATAAAAAACGCATTATATACACAGATACGCATAATGCGTTTAGAGTGCAATCACAAATACCCTTTTTTATTTACTAACCATCCCACCCATATAAAACAACAACTTAAAATATCGGTAAAAAAAAGGGTTTTTGATGGAAATTTACTGTTTGGCTTTTATAAGCAATAACTTATACTAATCGTGCTTCA # Right flank : AATCCTACGTGAGTTTTTACGTGAGGAACATTAGTTCACTGCCGCACCAGCATTGGAGAGCCATATCTTCACTTTGATATTTCAGCGCGCTGTTAGTAGATTCCCTATCGCCCTCGCGGGCATTCACTGTAGGGAATGACGGGGTTAGGCTCGATGTAATCACAGAACAACCATTGGATGAAATTTATGGGTGTCCTGTCTTTTCTGTCAAAATTACTATCACCATCAAGTTCACTGCCTGTGCGGCAGCTTTACTTACTGGCAGCAGCCATTGCTTCTTTTATTTCATCCGAGCTATACCCTTTTGAAGACAAGTAAGCATAGGCTTTACTTTTATCTTTAAAATTTGACAAATCAAACCGTTTTTTAGCCAGTACTAATTGACAATTTTCATAAAAATCGACCTCACCCGCTTCCTCTAAATCGTAGAGTACTTGCTCAAGATGAGTAATATCAACATGCTTCATTTTAAGCTCTTGCTTGATCACCGTTTTGCCTTT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //