Array 1 553224-552717 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021347.1 Acinetobacter baumannii strain B8300 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 553223 27 75.0 27 T...C.-....A......AG..G..... TTAATGCTTAGCATTGATTGATATGTG 553169 28 85.7 29 ...T.G.............G.......T ATAGGGCAATTCTGATCTTAAGTATTTAT C [553161] 553111 27 78.6 39 ....GC..C.AT...-............ GCCCTATTTTTCATTTTTCCTTCAAAAGTAATTTTGAAA G [553093] 553044 28 85.7 32 C..T......A.C............... CAGCGTTCTGCTTTACCGTTTACATATCGCGG 552984 28 92.9 32 ............CC.............. TTGCTTAGGCAAATGCACTGATTTTAAAGAAG 552924 28 100.0 32 ............................ TATCATGAACATTGTTCCTTGACCCACGGACA 552864 28 96.4 32 .........T.................. ATTCGATAGACTGATTCTATAAGCTTATTTGC 552804 28 96.4 32 ...G........................ TGAGGGTGCCACACATTGGCAGGCTGGAGTGT 552744 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ======================================= ================== 9 28 90.1 32 GTTATTCATCGCATAGATGATTTAGAAA # Left flank : TGCTGCTAAAACTGCGCTAAAGCAATTCAAATGCTCACCTAAATCTACTCTATTTTGAGGATATGGCATGAATGAGCAACCTGTTGTTAGGTTGTGAACTTCATAATCGCCATTTGCTTGAACATTTTGATTGATAATGAATTTAGACATAGTTCTTACTCCTCACAAATAGTAGTGATCGGAGGTAGATCTAGGCCGTGTTGTAGAGTCGAGTATGACAAAAATTTAAAATGTTGTGCTATCATTTGGATAGTCCTTATTTAAGTAGTAATAGCTTTGAAAATGGACAAAAGCAGGTATGAAGTTTGGTCACGGAATACCTGCTTTTTTTTATGCCTTTTCATAAATTAAGATATATTTGTCCAAAATCCTTGTCAAACATTATTTTTATTTAAATAAAATTTTACTATCAATCTTATCTAAGTATTAAGGGTAGTGATTTTTTAAATGAATATTAAGTATTCCTAATTAAGATTTGTTATGATACAACTCTTACATAG # Right flank : ACATTCAAAGAGGCTCATCGAATCCAATCGAATTTTATCATCGCTCAGATGATTCAAAATTTCTCTTTCAAAATTTAAAACGACATGTTTTGTCGTTAAAAGGCCGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAATATTATATTTTTATTACATTCGAACTTTAACAATAAACTATGCATGTCATTCTCATCTCTGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGACATTCATCTTGGCAAGCACCAATGACAATGGAAGGTTTAAAAGAAATTCGTAGCGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTAGCTGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTTGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTATTGATGCTAGATGAATGGGT # Questionable array : NO Score: 5.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:-0.00, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-23] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 558780-562170 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021347.1 Acinetobacter baumannii strain B8300 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 558780 29 100.0 31 ............................. AATTCGGGAGTTAAGTCCACACTAGAGAAGG 558840 29 100.0 31 ............................. AAAAGCGGCAGCAGCAGCGATCGCGACAATT 558900 29 96.6 31 ............................G TACTGGATAAAAACAAGTAAATAACGCCAGC 558960 29 96.6 31 ............................T TGTGACCGAGTTTGATCGGTCACAATTCCCC 559020 29 96.6 31 ............................T AAAAGGTGACACATCATATCTGATTTATATT 559080 29 100.0 31 ............................. CGGCCGTTGATCATAATTAGAATCGTATTAC 559140 29 100.0 31 ............................. GTGAATGGCGCGAACCAATTATGAATTTCTT 559200 29 96.6 31 ............................T ATTCCCCAATCTGTTTAAACGTCCAGATCTA 559260 29 96.6 31 ............................T TAGCCTGCGCCCAAGACACTATCATGGTCGC 559320 29 100.0 31 ............................. ACCAGAACCCCCCGCCCAATATAGTGGCTTC 559380 29 96.6 31 ............................T TTCACAGCAAATTATTGATGGTGATGAAAGT 559440 29 100.0 31 ............................. AGATTGATCATATTGAGACTATTGATGCTGA 559500 29 96.6 31 ............................G TTTTTACCGTTGTTGCATTAGCATCTACAGC 559560 29 96.6 31 ............................T GCAATTCAGCATTACGTTTTTCAGGATTCAT 559620 29 96.6 31 ............................T ACAGTCAGATGGATCTACATCATGAAGTATT 559680 29 96.6 31 ............................T CCAAAACGGTCAATGTGTTAATTTGCAATGT 559740 29 96.6 31 ............................C TCATGACGATGCTTTTCTAACAAAGTCATCC 559800 29 96.6 31 ............................T CAAATTCGCATAATGAGCACTAATGTTAAAT 559860 29 96.6 31 ............................T TATTGACTGGGATTGTCGAGGTAACTAGAGA 559920 29 100.0 31 ............................. ATGCGAATGCCCGCTGACTTTCATAAAGAAT 559980 29 100.0 32 ............................. CCTAGTTTTCGATCAATCGGAGTTTTACTATG 560041 29 96.6 31 ............................T AATGGTGATGCTAGTGCAATGGCAGGCATAC 560101 29 96.6 31 ............................C AACGCCAGTTGATGTATTACAGCGTGAAGAA 560161 29 100.0 31 ............................. AATGGCAGAGCTGCTCTTAAAACAGCGAAAT 560221 29 100.0 31 ............................. TTAGAACCAAAAGTTACTTCAAAAGAACGAA 560281 29 100.0 31 ............................. ACTATTCCTAAAATAATTGATACATAGATAA 560341 29 96.6 31 ............................T CTACAGCAGCCGTCCAACGGTGTGTATCGAT 560401 29 100.0 31 ............................. TCAACAACAATGGTTAAACTGCCATTAATCA 560461 29 100.0 31 ............................. AAGACAGTATTTTGGTAGCGCATCTCCTGCC 560521 29 96.6 31 ............................C TTGTACGAGCGTATTAAATGTACCTTCATCA 560581 29 96.6 31 ............................C TTGTACGAGCGTATTAAATGTACCTTCATCA 560641 29 100.0 31 ............................. ACCGATGAAGCACGAAACACAATCATGCTTT 560701 29 100.0 31 ............................. TACGGCGGATGATGTGGTTCGCCTTCATAGC 560761 29 96.6 31 ............................T TTAGCCACAGCACCGTTTACACTTGGAGCAG 560821 29 96.6 31 ............................T AGTGCACGTAGGTCATGAAAAGATGGGCGTT 560881 29 100.0 31 ............................. GAAGTACGAATCAATGTGAATGAATAACCAA 560941 29 96.6 31 ............................C AGTAACAGCAAAAACAAAAACAGTAACTAAA 561001 29 96.6 31 ............................G TACAGGGGAATTCACGTAGTGCTGGAACAAT 561061 29 100.0 31 ............................. ATCACCATCATCGGTGGCATTAGCTTCAGAC 561121 29 100.0 31 ............................. TCACCAGTGCCAGTGCCAGTGCCAGTGCCAG 561181 29 100.0 31 ............................. ATATTCAAGAACCAGTTTCAAATATTGTTAT 561241 29 96.6 31 ............................G TATGTAGAGTTGAAATGTAGTCCTGCGAAGA 561301 29 100.0 31 ............................. CCACTTGTCTTGACAGCAACTATTGAATCCA 561361 29 100.0 31 ............................. TCTCCCATTCTTCATCTGACTTCAGAAAATC 561421 29 100.0 31 ............................. GAATGTCTAAAATATCTGAGGCATCAGCAGA 561481 29 96.6 31 ............................G TCATCAATACGCTTCAGTGCATCAATGTCAT 561541 29 96.6 31 ............................T AACAGAAGCGCAAAAAAAAGCGTATATCATT 561601 29 96.6 31 ............................T TCACCTGCAAAGTAAATCGCATAAATCTCGC 561661 29 100.0 31 ............................. ATTTCAGCGTCAATAGTCTCAATATGATCGA 561721 29 100.0 31 ............................. TCCCGGAAGGCTTGGCTAAACTTGTACTTTT 561781 29 96.6 31 ............................T CACAGTATGAAAAGATTGGTGATGCTTCGGA 561841 29 100.0 31 ............................. CTTGATGCAGGTCAGTGCAATAAAAATGATC 561901 29 96.6 31 ............................G ACATGGCTATGAAGTTTTATACACATACAAT 561961 29 100.0 31 ............................. CAACAACGCTGTCAACCTTTAGCTAATAAAT 562021 29 100.0 32 ............................. TTAAGCCTTTGATTCCATTGGGTTTTTCTTAG 562082 29 100.0 31 ............................. AGAAAGGTCTAGCAATTGGGGCTGTAGGTAC 562142 29 89.7 0 ........................AT..T | ========== ====== ====== ====== ============================= ================================ ================== 57 29 98.1 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGACACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTCTACACGGTAAAACACGTCGTGGAGGACTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAGATGGCGTCAATTGAACAAATATAATAATATACTGATTTATCTTAATTAATTTTTATAAAAAAATCCCAGTGTACATGACAGTGTACAAATTATATGTTGCTGGCCTATTTCCTTCGGGTTTGGTTGCTATATACGGAGTACAACTCATGTATTAAACACCTTACTGGCAATCCAGTAACACTACCCTACTCCACCACTTACACAGCATCACTTCGACATCTCGTCAACGCAATTTTGCGTTCGGCATTGTTTTCAAAAGTTTATCCAGAATTAGACGCACCTAAAACCCGATAAAACCCTATCAACTCTTATCATTAGCTCTTAATAAAACGTAGTCTTTTATCCAGGTAGCTACTACGAATTTCTCGTAGTAAGGCACTGTATTTGAAACATGGAAATGAGATTCCTTAAATTAGCGATAAACCTTGTTGTATATAGCTTCAAG # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.71, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //