Array 1 4776-3728 **** Predicted by CRISPRDetect 2.4 *** >NZ_VMNR01000014.1 Pseudomonas aeruginosa strain PA141 NODE_14_length_56921_cov_2.265345, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4775 28 100.0 32 ............................ AACGGACCGATGCCATCGTCGGCACGCTCGTA 4715 28 100.0 32 ............................ TTAAGCCACGCGTCCAGATGGCGCAGGCAAGG 4655 28 100.0 32 ............................ TTTGCCCAGGCGTGCGCGGGATGAACTGGAAC 4595 28 100.0 32 ............................ TGGGGCGGTTTGGTGTTCTTGCGACTCTCTTC 4535 28 100.0 32 ............................ TTCGAACTGCCAGATTTGCTCGCGTGCGTTCT 4475 28 100.0 32 ............................ TTGACCACGGGCGAGACTTACGCCGAAATCAG 4415 28 100.0 32 ............................ TCATGGGCTGGGCGGCGAACGTCCTCGCGCAT 4355 28 100.0 32 ............................ TCTACGTCCGCCAATTCTCTTGGCCCGTTCGC 4295 28 100.0 32 ............................ TGGGTGGCCGACATCGTTGCGTCGAACTCGTA 4235 28 100.0 32 ............................ GCATGCTGTCCGGCCTGTTGATCGGCCCGCTG 4175 28 100.0 32 ............................ GCAACGCCGGCCGAAGACCAGACCATCACCGA 4115 28 100.0 32 ............................ TTCACCGTCACCCAGTCCTGGGTGGCGTAGAC 4055 28 100.0 32 ............................ TTGGCAGCTGTAGCCAGAGCCGGATGCGAAGC 3995 28 100.0 32 ............................ AGAGCGCTCTGGTGGACGGCTGGGTACGACGA 3935 28 100.0 32 ............................ CGTATCAGCGGGCCGCCAATGAAACCGTCGAG 3875 28 100.0 32 ............................ AAGAAGATGAACCGCGACGACCACCGATAGGA 3815 28 100.0 32 ............................ AACGCCCAGCGCCAGCGGGAGAAACGCCAGCG 3755 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 18 28 100.0 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : ACATGTGTCCGCGTAGCGCGACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCTCATCACAGGACCTTTTGCCCTCGAACGGCACGGTTGATCGCCGTCCCGGTCCTCGCGAAACGGCTTCTAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACACCCTTATAAATCAGTAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCAGGGCTA # Right flank : CTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //