Array 1 33948-39044 **** Predicted by CRISPRDetect 2.4 *** >NZ_AJXV01000044.1 Rhodanobacter denitrificans strain 116-2 contig044, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 33948 36 100.0 36 .................................... GCATCTCCAGTTCGTGCTTTTGCTGAAGCTTCTGGA 34020 36 100.0 37 .................................... AACGCGGTGGTCAGCAGGCCGTCGAACGCCAGCGCGG 34093 36 100.0 36 .................................... CCGCGCGACCGCTGGGCGCAGTGCCACCAGCCAACC 34165 36 100.0 37 .................................... TTGGCGTTCACCGTACCGTCCATCATGTACCCGGGCA 34238 36 100.0 37 .................................... GTCGAACCACTGGAAGATAACGGTCACGCTGTCCCGG 34311 36 100.0 36 .................................... ACCGACACGAGGTCGGCTACCAGCATCTCGCAGCCC 34383 36 100.0 37 .................................... GCGGCGAACACCTGTATGACTAACCGCCTCCGCAACG 34456 36 100.0 36 .................................... ATTGGCCTTTGCAGCGTCGTCGCTGATTTTCTGCAT 34528 36 100.0 35 .................................... CGCATGGCGGGCGTTGGCGATGGCCGAAGATGAGC 34599 36 100.0 37 .................................... ATTGCCTCAAGGATTCCCATGGGCACCTCTGACGATA 34672 36 100.0 36 .................................... CTGACGCTGCGGCTTGCCCTGCTGCTGCTCGCGCTC 34744 36 100.0 36 .................................... CCGGCGATCGAGGTCGTCTCGATGGTGCGTAAGACG 34816 36 100.0 36 .................................... CGGTCCTTCGGCAATCGGCGGATTCGTTCTTTCATT 34888 36 100.0 37 .................................... TCGAAGCGTTCACGGCCTTCCGGCGAGTCCAAGGACT 34961 36 100.0 37 .................................... CCGCTGGCGGACGTGAGGCGCGGCATTACGCGCCTGC 35034 36 100.0 37 .................................... TTGGTCTTGCCCTCCTCCCAGCGAATGCCATCCTCGC 35107 36 100.0 38 .................................... ACGGAATACGCCGTCACGCAGGCACAGACGCAAGCGGA 35181 36 100.0 37 .................................... GGACTGGATCGCAGAGGATAGCTTTGCGCACCCATCC 35254 36 100.0 37 .................................... CTGAAAGAGGCTTTCCCGTACACATCCGGCAAACGTG 35327 36 100.0 36 .................................... ATGTACTGCTGCACGATGATGGCCGGAACCGTCATC 35399 36 100.0 37 .................................... GACACGATCTACCTGAGCCTGGACATGGACGCTGCCG 35472 36 100.0 36 .................................... TTGGCACGGGCGGTGTGGCAATACTCGCGACCGATC 35544 36 100.0 37 .................................... AAGGGCATTACGGTGTCTCCAGAAATGAAAACCCCGC 35617 36 100.0 37 .................................... GCTGGTATCGGCGTGTGGAGCCTCGCGCTTCGTGCTG 35690 36 100.0 36 .................................... GACGACGAGTTCATTGACAACGATCTGGCGGCAGTG 35762 36 100.0 36 .................................... GATCTGGGGCGAGGTCGACAGCTACAACGAGGTCGT 35834 36 100.0 37 .................................... CTGGTGATCCCGTTGTGCCCGGAACACCACCAGGGCG 35907 36 100.0 36 .................................... CGCGAGAACCGGATATCCGGGTTGTCGGCGTCGAAG 35979 36 100.0 38 .................................... GACATCGCCTGTCGCCGCATCGAGGATGCGCAAAGGCA 36053 36 100.0 37 .................................... TTCGGATGTGTGCTGAGTGAGGATGTACATGGCTCAG 36126 36 100.0 36 .................................... CCATGACACAGACTCGTATCTACACCGTCACCGATG 36198 36 100.0 36 .................................... CCGGGTGATCCAGTTTTCCATTCTTCGCGTCCTCGA 36270 36 100.0 36 .................................... GAAGGCAACCCGGAGTTCGTGGAAGAGAGTACCGAC 36342 36 100.0 37 .................................... AATTTCCTAGGGCGACATAACTACCCGGAGAACCAGG 36415 36 100.0 36 .................................... CGCTCGATGATTCTCGCCATCAGCGCCTCGGCGTCC 36487 36 100.0 36 .................................... GCGGCCCGTCTCGGCATCCCCACGGCCTCCAACTTT 36559 36 100.0 36 .................................... CGGGACAAGATAATACCGTATTCACGTGTCGATGCG 36631 36 100.0 36 .................................... GCGATCAAGGTTTTGCGGCGCTGCTGGTTCCGAGCG 36703 36 100.0 36 .................................... ACACGTAGCCCAAAAAGAAAGGGCTGTGATGGCTCG 36775 36 100.0 36 .................................... ATCCGTGATGTGCGTTGGCCCAGCATCACGAAACCG 36847 36 100.0 36 .................................... TCGCCTTCACACCGCGCGGTCTCGCGGGCTCGGTAA 36919 36 100.0 36 .................................... GTATGCTCGACTTTATGCCAACGAATCAAAAAGATG 36991 36 100.0 36 .................................... TGGACTTCGCGCGCAACACGGCGAACCTCGGCCCTA 37063 36 100.0 37 .................................... TACCACCGCGGCATCGCCAAGGGTACCGAACTCTCGG 37136 36 100.0 36 .................................... TCATCGCGAAGGCCAGCACCGAGGACATCGAGGCCG 37208 36 100.0 35 .................................... GTCGCAGGCGTAGAAGATCGGATCAAGCTGCCCGG 37279 36 100.0 36 .................................... CCGTTGGTACGGTCGCAGCGTCGGCATCGAAAAACC 37351 36 100.0 36 .................................... GCTGACTGCAACCGGGTATGAGATGTGGATCAATGC 37423 36 100.0 36 .................................... AGAGCCCCCGACACAAAAGACAACATGTTGTCCAAC 37495 36 100.0 37 .................................... TACGGCACGGCACGATGGCAGGCAGTCAGGGCAGGGC 37568 36 100.0 38 .................................... CATGTCGGCAAAGTGCCCTGGACGACCACCGATGAGCT 37642 36 100.0 36 .................................... ACGTTGCCGTTGTGGAGATTGACGTTGAAGGCGGAC 37714 36 100.0 36 .................................... GAAACCGGCACCACGTTCAGCCCATCGGTACGCAAC 37786 36 100.0 35 .................................... ATGCGCGATTTCCACGCGATGGGCATGGACGCGAT 37857 36 100.0 36 .................................... GACGTCTCGCCGGTGGTGGCTCGCATCCGCGCACTG 37929 36 100.0 36 .................................... GATGCTCTCGCAGGCTACGGGAACGGCGTCGGCGGC 38001 36 100.0 35 .................................... ACTGTCACCTGTTCCAGCGTGGCGGCAATGGCCGT 38072 36 100.0 36 .................................... GCTTTGTGCGCCTGCACGACGTCGCAGCCTCGTCCG 38144 36 100.0 36 .................................... GCGCAGATGCGGTGGCCGGCGCTGCGCAGCGCCTCG 38216 36 100.0 36 .................................... TCGCTGTTGCGCTTGAAGAAACGGGTCTTGGCCGCG 38288 36 100.0 36 .................................... ATGTAGCTGTCGGTCGACGGGTTGAGCGCGGTCGTC 38360 36 100.0 37 .................................... GAGTAGCGCGGCGGGATGTTGATGATCAGGCGCTTGC 38433 36 100.0 36 .................................... ACCACGACGGTGCCGGCGCTGCCCAGGTCGACGCCC 38505 36 100.0 36 .................................... GCCTCGTTCGTCGGGACGATCGTGATGTGCTTGCCG 38577 36 100.0 37 .................................... GCATCGAGGAAGGTGATGCGTAGCGCGACGCCGCCGG 38650 36 100.0 35 .................................... CGCGCCGGGAAGAGCGCCGGCCGCTTCGATTTTTG 38721 36 100.0 36 .................................... AGCTCCTGGATGTCCTCGTCCATCGACTTCAGCTTG 38793 36 100.0 35 .................................... TTCACCAAGCGAGCGGCGCACTGATGCCGGTCAAG 38864 36 100.0 35 .................................... CCGGTGAGCCATTCGGCTACCTTCGCGCGCTGCTT 38935 36 100.0 38 .................................... TGGGCAGGTACGCCGCTCTCCATGACCTTCGGCTGCGC 39009 36 88.9 0 .............................CA...TA | ========== ====== ====== ====== ==================================== ====================================== ================== 71 36 99.8 36 GTGATCCGCAGCGAAGAGCTGCGGCCTCATTGAAGC # Left flank : TCTGTATCTGGTGACCTACGACATCCGCGACGACAAACGATGGCGGCGCGTATTCAAGACCATGAAAGGGTTCGGGGAATGGCTGCAGCTGTCGGTCTTCCAGTGCCGCTTGAGCCGGCGTCGGCACGCCGAAATGCTGCAGCTGCTCGACGGCATCATCCTGCGCCGCACCGATGCCCTGCTGATCATCGACATCGGCCCCGCCGACAAGGTCAAGCCTCGCGTGGTCAGCCTTGGAGACAAGTTCGAACCCGCCGCCAGGGAGCCCATCATCGTTTGACCTTCACACCCGTCCTCTTTCGCCCTATCGCCGCGAGCGCTCCAGTGACACCGCGAAACCCGGTCACCGCTCGCACCTCAATGCTCTCTGACAATCAAGCTGTTACCCGCCCCTGTTGCCATCCGGCAACACGCGCGTTAGCTTGGCATCCCACCGTGGCAGACACCTCTCGCAAGCAACCACCAAACAGTCAACCCGCGCAACGACTTGCGGATGGACT # Right flank : AAGCCAAGCAAGACTCTCACCCAACCGGATAACGCCATTCCGCGCCAGCTACGCGGTTATGGTCGAGCAGTTCTCCCGCACACGGGCGGACCGCGGTTCCAGGCAGACGCGGCGTATATGCGCTAGTGCGTGAGTAAAGCGCGGCGGGGTCGCGCTTTACTCACGCCTCTGTGCCTTCTCGCAACTTATTTGACCGTGAAATCCTTGCTGGCGACCTGCTTGCCGTCCAGCGAGATGTCCACCTTGTAGTTGCCGGCCGGGAAACCGTCGGGCTTGCTGATCATGAAGGCGGTGGTCTCCGGACCCATCGCATTGAGCGTCTTGCTGTCCTCGTGCACCACCTGGCCATCCTGGTAGGTCCATTTCGCCGCCAGCGTGGCGGTACCGCTGCCGCCGGTGTCGACCGAGGCGTAGATGGTGTCCTTCGGCGCGAAGCTGGTGCCGCTGGCGAGGATCTTGTGGTTGGCGTCGACCGTGGAGCCCAGCTCCACCGCGCCGAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGATCCGCAGCGAAGAGCTGCGGCCTCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA //