Array 1 1188861-1191150 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056899.1 Citrobacter sp. RHBSTW-00017 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1188861 29 96.6 32 ............................T TTCATTCCATCCTCCGATATTAACCACGTGCG 1188922 29 100.0 32 ............................. GCTTTCACCTAAATTTGCTGTTCAGGTTTCAA 1188983 29 100.0 32 ............................. CGGGCAATTTGCGTTTCAGGGAACTGGCTCTT 1189044 29 100.0 32 ............................. TCTGCTCTCTCCATCGCCGTCATTGAGGCGAC 1189105 29 100.0 32 ............................. ACAGAGGGAGGCCGCTGTCGGGTGCGGTTCGT 1189166 29 100.0 32 ............................. CTGGCCAATCTGGAAAAATTGCGCGATGCCGT 1189227 29 100.0 32 ............................. CTGAGGTCTGCGCTCGCTGATGAGGTGGAAGA 1189288 29 100.0 32 ............................. ATATTCAGAAACTCGGTGAGCGTCTTGGTTTG 1189349 29 100.0 32 ............................. CCTGTCATTCGTTTTGATGGAAATATGCTTCA 1189410 29 100.0 32 ............................. CAAACCGACGAAAAAATCACGCATACCGTCAT 1189471 29 100.0 32 ............................. TGCATCTGGAAGCTGGCAAAGTAGTTACAAAG 1189532 29 100.0 32 ............................. ACGAGCATACGGAGGTGGTTTGGGTACATGAA 1189593 29 100.0 32 ............................. GCGTAACCCCAGCTTCTCTAGCATCTGCTGAG 1189654 29 100.0 33 ............................. ACCGCTGGCACTGGCTGGAGGCTCGCCATTGGG 1189716 29 100.0 32 ............................. CCATCAACCCTGATTTCAATACGCACGACGAT 1189777 29 100.0 32 ............................. TAAAGTACCAATAGTACATATTTAAGATAAAA 1189838 29 100.0 32 ............................. ATTACCAAAGGCAGCCTGAACGGGTTTCGCGT 1189899 29 100.0 32 ............................. AAACCAGACCCGGCGTTGGATAAGCCTCTGCC 1189960 29 100.0 32 ............................. ACAGCCAGATCAGTGGCGTCTTTATGATCTCG 1190021 29 100.0 32 ............................. CGAACAATTTGAACATAACGAGAACCCCGCCA 1190082 29 100.0 32 ............................. GCGGCGCAGCGGCTGCGGCCATCACGCCACGC 1190143 29 100.0 32 ............................. CCGGGTAAAACCATAGGAAAAATCGGGTATGC 1190204 29 100.0 32 ............................. TTTCGTGGAATTGAGATATAGCGACTGACCGA 1190265 29 100.0 32 ............................. AACGAGGGGGCAATTGAGCCGGACGTTGACGG 1190326 29 100.0 32 ............................. ATATTGAGGACTCGATATCGATTGCGATGATG 1190387 29 100.0 32 ............................. TTGCCCGACCAGGCTTTCACTGACGTGCTCAA 1190448 29 100.0 32 ............................. GCATACGGCAGGATTTACGAAATTACTATCAA 1190509 29 100.0 33 ............................. GGTATTCTTTGTCTGAGTAACTGCCTTTTCTAA 1190571 29 100.0 32 ............................. ATCCTAAACAACAGCTCGCCTATTTGGCCGTA 1190632 29 100.0 32 ............................. ATATCGCCGCAGCACTCACGCAGTTTGCCACC 1190693 29 100.0 32 ............................. CAGGGATAGTCAGCAGCGTTCGCGGTCCCGGC 1190754 29 100.0 32 ............................. GTTTGAATAGTGCATTCATTATTTGCGGGAAC 1190815 29 100.0 32 ............................. AGCGGGGTCGGAGTTACTTTTTGTTTTCGCGT 1190876 29 100.0 34 ............................. ATCGAATATAGACAGTAAGCTAAATTATGCAAGT 1190939 29 100.0 32 ............................. GTGCGCGGCCCCATTTAGCAGGGCGTTTTGCG 1191000 29 100.0 32 ............................. CGCATAGCCGAGCTGGAGGCGCGGACGGTGAA 1191061 29 100.0 32 ............................. TCTCTGGCCGCGTTTAAATACTCAGTCGAGAA 1191122 29 93.1 0 .........................T..A | ========== ====== ====== ====== ============================= ================================== ================== 38 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTGATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCTTTTGCCAGTTCTTTTACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGTGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //