Array 1 75912-75700 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB912704.1 Saccharomonospora saliphila YIM 90502 SacsaDRAFT_Scaffold73.129, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 75911 29 96.6 32 ............................C ACACCCCGGTAGGTGTCGCCGGGCCGCTCGCG 75850 29 100.0 32 ............................. GAGCAGGGGCCGACTACATGGCGACACCGCGT 75789 29 96.6 32 ............................A AAATTTGGTGGACCCCGGCGCCGAAGGTTCGC 75728 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTCTTCCCCGCGCGTGCGGGGGTGGTCCG # Left flank : CATACCCACGCCAGGACCACCCGCGCACCGGAGAAGATTCGATTAATACAGAAGCGGAACCGGCTGATCGGACCACTCCCGCGCACGCGGGGAAGACCGGTGGTTCTGCACCACCACGGCGACACGGCCCGGACCACCCCCGCGCACGCGGGGAAGACTTCCGGGCCGACTTGGAGGCGGGCGCGACGTGGGGACCACCCCCGCGCACGCGGGGAAGACGGCGCGCCCGGGCAGGCCGAGCGGCCCCGGGAATGGACCACCCCCGCGCACGCGGGGAAGACTTGCCGATCAGGCAGATCGCGCGGGCGATGTCGGGACCACCCCCGCGCACGCGGGGAAGACCTCCTGGGTCCAGGAGACCGTGAACGCGGCGTCGGGACCACCCCCGCGCACGCGGGGAAGACGGGGGGCAGCCTGTGATGACGGAACGAGGCTCGAGGACCACCCCCGCGCACGCGGGGAAGACCACGTGTCGTAGTGCGCGGCGTCGTCGCGGTCGG # Right flank : TCGGGGCAAAGATCCCAGCGAGCTGGCCGAGGCCGGCATCATCGAGAAGCGGGACAAGGGACGACTCGTGCGTGCCGCCGCCCGCTCCGACGTGGGCAAGTGATCACCGGAGGCTGACCGCTCGGACGTGGGGCGTCCCGGACCCGTCGGTCCGGGGCGCCCCACCCGCGTCGGCGGAGCCCTACCCGGTCAGCACACGGACCATGCCCTCCTGGCCGACCGTGGCCAGCAGCGTGCCGTCGCGGTGGAACAGGCGGCCCACTCCCAGTGCCCGGGCGTCGCAGGCCGACGGGCTCTCGGTGTCGTAGAGCAGCCAATCGTCCGCGCGTGCCCTGCGGTGGAACCACATGACGTGGTCCAGGCTCGCCGTCTTCGCCCGGACGCCGTCGTGACGCAGCGAGTGGGCGCGCATCGCGGCGTGCAGGATCGAGAAGTCGGACAGGTAGGCCAGCAGCGCGGTGTGCGGCAGCGCCTCGTCGGGGAGCGGCCCTGTCGGGCGC # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGCGTGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 75946-76343 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB912704.1 Saccharomonospora saliphila YIM 90502 SacsaDRAFT_Scaffold73.129, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 75946 29 96.6 33 ............................T CGAGCCTCGTTCCGTCATCACAGGCTGCCCCCC 76008 29 100.0 33 ............................. GACGCCGCGTTCACGGTCTCCTGGACCCAGGAG 76070 29 100.0 32 ............................. GACATCGCCCGCGCGATCTGCCTGATCGGCAA 76131 29 96.6 33 ............................A TTCCCGGGGCCGCTCGGCCTGCCCGGGCGCGCC 76193 29 100.0 32 ............................. CACGTCGCGCCCGCCTCCAAGTCGGCCCGGAA 76254 29 96.6 32 ............................G GGCCGTGTCGCCGTGGTGGTGCAGAACCACCG 76315 29 93.1 0 ....................A.......G | ========== ====== ====== ====== ============================= ================================= ================== 7 29 97.6 33 GTCTTCCCCGCGTGCGCGGGGGTGGTCCC # Left flank : CCTGTTCCACCGCGACGGCACGCTGCTGGCCACGGTCGGCCAGGAGGGCATGGTCCGTGTGCTGACCGGGTAGGGCTCCGCCGACGCGGGTGGGGCGCCCCGGACCGACGGGTCCGGGACGCCCCACGTCCGAGCGGTCAGCCTCCGGTGATCACTTGCCCACGTCGGAGCGGGCGGCGGCACGCACGAGTCGTCCCTTGTCCCGCTTCTCGATGATGCCGGCCTCGGCCAGCTCGCTGGGATCTTTGCCCCGACGGACCACCCCCGCACGCGCGGGGAAGACGCGAACCTTCGGCGCCGGGGTCCACCAAATTTTGGACCACCCCCGCACGCGCGGGGAAGACACGCGGTGTCGCCATGTAGTCGGCCCCTGCTCCGGACCACCCCCGCACGCGCGGGGAAGACCGCGAGCGGCCCGGCGACACCTACCGGGGTGTGGGACCACCCCCGCACGCGCGGGGAAGACCCGACCGCGACGACGCCGCGCACTACGACACGTG # Right flank : GATCAGCCGGTTCCGCTTCTGTATTAATCGAATCTTCTCCGGTGCGCGGGTGGTCCTGGCGTGGGTATGCGTTCACTCATGGCAGCGGGTGTTCCCCGCACGCGCGGGGAACACGACGAGGTAGCCGGCGGCCAGGTCCCGGGGCAGGAGGGGCCACCCCCGCATGCGCGGGGAAGACGTTGGTCATGGCCGCCGCGGGCACGGGGCCGTTCGGGCCACCCCCGCATGCGCGGGGAAGACACTTGACGACCTGCATCGATGTCGGACGGGAGGCTTTTTTTGTTCACTTCTGACGCGCACCCTACCCGCCCTCGGCCCATTTCCACCCGGCGTGTCGCCCTCGACCCGTAGGCTGGCGGAGCGTCCTGACGGGAGGTGGGTATGGAGCGGGTGCCGCCCGAGTTGTTCCGGTTCAGCGTGGGGGAACACGCCGACGTCTACACCGCCGTGCTGCACGCCTTCTCCGAGGCGAACGAAGAGTTGGAGACCTCGCTCGGGCT # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCGCGTGCGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCGCGCGAGCGGGGGTGGTCCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //