Array 1 45305-43752 **** Predicted by CRISPRDetect 2.4 *** >NZ_ANEV01000024.1 Streptococcus agalactiae MRI Z1-219 ctg120002131810, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 45304 36 100.0 30 .................................... ATAATTTTGTACATTTCATCGCACCAAGTT 45238 36 100.0 30 .................................... AAATAACACTTTGGAAGTTGAGTTTAATAA 45172 36 100.0 30 .................................... TCTGTGATGTCTTTAAAAGCATAGACAACT 45106 36 100.0 30 .................................... TTTTTATTATGGAAAGTAATCATTATTTTT 45040 36 100.0 30 .................................... ACGTCTTCAGGTGTTATTCTTGGGTCTTCT 44974 36 100.0 30 .................................... AATTTAAAATCTTCATCTTCTATACGTTTG 44908 36 100.0 30 .................................... TAAAGCTAACGTTAGTCGTTCGCTCGTGGT 44842 36 100.0 29 .................................... AAAAAGCAATGGAAGCTAACGAGATTGCT 44777 36 100.0 30 .................................... GCCTGCCCCACAAAAAAGTATATTATTATT 44711 36 100.0 30 .................................... CAATTGATTGCCGTTAAAACCGATAGAGGA 44645 36 100.0 30 .................................... AAATTGCTCTATCAGTCAATAAAGCAAGAT 44579 36 100.0 30 .................................... TCATATTGAGTGGTTGTTTAATTAAATTGA 44513 36 100.0 30 .................................... TGAATTCCACGCCACCAAGTAAACCTGTGA 44447 36 100.0 30 .................................... ACAAGAAACAAACAGCCTTGATGACTTAAT 44381 36 100.0 30 .................................... AAAAAGCAATGGAAGCTAACGAGATTGCTA 44315 36 100.0 30 .................................... CAACCCTATGTTTGATAATATTTTAGACGT 44249 36 100.0 30 .................................... AAGTGAAGTTGAATTTTATTTGAGATACTA 44183 36 100.0 30 .................................... TAATACTTTTACAATATGTGTTTTCACTAC 44117 36 100.0 30 .................................... AAGTGCCACAGTTTGTGGCTGATTGGATTG 44051 36 100.0 30 .................................... CATTCAAGGACTACCCTCAACAGTAACTCT 43985 36 100.0 30 .................................... TTCTATCTTCTGAAGATATTTCACAAGTGA 43919 36 100.0 30 .................................... TCAGCGAGATGCTCTAAGTAAGCATGTTGA 43853 36 100.0 30 .................................... TCTTCTTTTTAATTCTTCTAACACTCCATC 43787 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : ATCTTCTTTTGACCTAACAAAAGGATATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGCTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.20,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //