Array 1 2812711-2811603 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAKAKG010000001.1 Leclercia sp. Marseille-Q4284, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2812710 28 100.0 32 ............................ AATCAGTTCTTTCTGCAAAACCTTGCGAGTTG 2812650 28 100.0 32 ............................ TCCACATTATGAAAGTTTTTCGTGCAGTTTAT 2812590 28 100.0 32 ............................ AGTACGACAGCAAAAGCAGCCTGGGCGCAGAC 2812530 28 100.0 32 ............................ TCGTTGACTCTCGCGCCGGTGTTCCACAGCGT 2812470 28 100.0 32 ............................ AATCCCGATACTGTTGTTAGCTGCAGCGCTGG 2812410 28 100.0 32 ............................ TACACACTCGTCGTCAAAGTGAGCCATGCCCT 2812350 28 100.0 32 ............................ TGCTGGCGTTTTCAGAAGGGTATGCAATGGTC 2812290 28 100.0 32 ............................ AAAATAGCCGCTGCGGCTAACGTTTCTCTATC 2812230 28 100.0 32 ............................ TGCATGATATTCGCCTGCCGGAAGCCGGTGCC 2812170 28 100.0 32 ............................ TTGTAGCCCCGTTCATGGTGGCCGGAGATATG 2812110 28 92.9 32 ...........TA............... CTTCAAATGACCACTGCAACAGTTCAAAACTC 2812050 28 92.9 32 ...........TA............... AATATGACGCGCCTGCACCACCGGTCGTTCAC 2811990 28 92.9 32 ...........TA............... AACGTTGCTGACGCAATCGCAGATGAGTACCA 2811930 28 89.3 32 .C.........TA............... ATGATGATTTTGATAGCCAGCGAGGGATCGAG 2811870 28 92.9 32 ...........TA............... GTCCAGCCAGCGATGGAAGATGTTTTGCTGGT 2811810 28 92.9 32 ...........TA............... TCTATCGCTTCCCCATCATCACATATCAGCGC 2811750 28 89.3 32 C..........TA............... ATGCTTCGAACTCACAGGGAAACATGTCGTTT 2811690 28 92.9 32 ...........T.........C...... TACCAGAGCATCAGGACAGCACTACCTGTAAT 2811630 28 71.4 0 ...T.......TA.........CT.CCT | ========== ====== ====== ====== ============================ ================================ ================== 19 28 95.1 32 GTTCACTGCCGGGCAGGCAGCTTAGAAA # Left flank : CTGCGCTCAGCAAACTGGAGGAGAGCCGGTGGCGAGCGGGTCTGAATGACTATTGTAGTGCGACGGCGATCCTGGCGGTACCAGACGTTACCAGCTGGTGCATTGTCAGCCGCGTGCAGGTCAAGAGCAGCGTTGAACGACTCGTTCGTCGTTCATTACGAAAGGGGTGGATAACCGAGGATCAGGCGCAGCAGCGAATAGCGCAAGGAAAAGACAGACGTAGTCATTTGCCTTTCTTACATCTTAAAAGCTTGTCTACCGGGCAATGTTTTAGGTTATTTATCCGCCATAGTGAATTACAAACGATGCCTGTCAGTGGTTTGTTTAGTAGTTATGGTCTGAGCGACACGGCAACAGTACCTTGGTTTTAACCCTTTTTTCTCGTAAGGCGATAACCTATTGATTTCAAATGAGTGGTAGTGATGGGAATAAAAAAGGGTTTAACGTAGAGAAAGTGGGTTTATCTAACAGTAACAAAGGGATAGTGGTTTTAGGTTCCA # Right flank : ACCGGATATCAATAAGCATTACTCCAATTCTTTGCGCGAATAGCAATCCCCGCTTATCCGATTGTCGGTCTGGTACAGGCACCCGTTTTTTTGCCCCGTCTGGTGATGAGCCAGGCGGGGCATTTTTACGTCCTGACCCGCGCAACCGTCTCCTGCCATGCCTGCCAGCGGGTCTGCAACCGGACGTGACGCGCCATATCCGGCGTAAAAGTCACATGTTCCGGCAGATACTGGCGCAGCTGCGTAGTGGTCAGATTGAGTAGTGTCTTTCGCGCCAGCAGCGCTGCCCCCATCGCGGAAAGTTCAGCGACGTCGCTGCGCATCACCGGGCAGCCGAGCAGGTCCGCCTGATACTGCATCAGCCAGTCGTTTTTCGTCGGCCCGCCGTCGACCATCAGCGCGTTCAGGCTAAAGCCCGGATGAACGCGCATCGCCAGCACCACGTCGGCAATCTGATAGGCGATCGACTCCAGCGCCGCGCGGATCAGGTGCGCTCGCTT # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGGCAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGGGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //