Array 1 7568-8392 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPO010000037.1 Microcoleus sp. FACHB-1515 contig37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 7568 35 100.0 42 ................................... AACAACGCCACACGCAAGCCGCAATGGCTTGCTTGGCAACCA 7645 35 100.0 34 ................................... CAGTGGCATTTGGCTGAACACTTCCAAATGCAAC 7714 35 100.0 37 ................................... GACGCATTGGCTGGTGCAGCTATTTTTTAAACCCAAA 7786 35 100.0 34 ................................... GCCTTGTGTTGTCCACGCGTTGCCCACTTCGATT 7855 35 100.0 38 ................................... CGGTTGGCTGGGCAGCACTGGCAATTTTCATTGCCATG 7928 35 100.0 36 ................................... CTGCTCCCATTTTGTAAAGCTGCCCTGGATTGAGCA 7999 35 100.0 37 ................................... TTTGGCTGCCCAATAAAAACCAAACCAAGTGCAAGAA 8071 35 100.0 36 ................................... CCGCCAGTGTTGACGACCGCCCCACCTGTGGAGTTG 8142 35 100.0 41 ................................... CCTGCTTTGCAAGCAAGGCGCGAACAGCGGCGGCGGTGGTG 8218 35 100.0 33 ................................... TCCTGCACCTCCTTTGAAGACGTCTCCAATGCC 8286 35 100.0 37 ................................... ATCGCCTCGTATCCACAGTTGTCGCAGTTCCAGAGCA 8358 35 97.1 0 .............T..................... | ========== ====== ====== ====== =================================== ========================================== ================== 12 35 99.8 37 CTCAAAACTTCTTCGGAAGTTGAACTAATGGAAAC # Left flank : GGGCTGTGTTTTGGTGGATGCGAGGTGTTTGGTGCGAATGACCAATCGATCGCACTTCAAAGGAATTGCAAAGCGATCGCACACCAGCGGCGATCGTCAGTTTGCTGTTTTGGCAGTGAGCAAATCGATCGAACGTTACTTCAGCACCCGATCGATTCACACGATCGGGTATTGAAATTCAGGTTTGAGATCTGCATTACATCGCGCTCGAATTGGGCGGCGGTTGGCGGCGGGCACAATTACTGGAGGCGGTGAGGCGATCGTCTCCGGGTTATCATGCGTGGGTGCAGTAAATTTGGTTGCGTTTTCAAGGGGGTGATCGAGATGGCTGAAAGACTGATTCTATCGTTGACCCCCTTGAACGCCTTGCTGGAAGCAGGTTTCAGCCATTTTTCCAGAGGTCTTATTGCGAAGATTTATCAATTGTGGCGGGTGGTGGTTGACCCCCTTGAAAACATGGGTGTAGAATGCCCTCAGAGCAAGGCTTTCAGGAGCCGACC # Right flank : CGCGATCGATGCAATGTGAACTAGCGAAAGCTCTTTCTGAGGCTGCTTGGAAAGAGCTTTCGCCTCAGCAGTTATGTTGAGTTTTGCTTAGCTTGATCTCAGGCATCGATCGCTCAATTTCTTAGAAAGTTTTGTCAATCTAGTTCTCGATTGCTTTGACCTAACTGCGTAGCCAAGCTGTCAAGAACAGCATCACAGCGCTCAACTAAATCATGCTGTCCCATTTCTTCAAACAGCTTTTGAGCAGAGCGAAAAGCCGCGATCGATTCTTGAATTTGATTTTGTTCCTTAAACACTTTTCCTAAAATAAACCACAGCTTTGCCTGTCCAGGTTTGTCACCAATTTGCTGCCGAATGCTGAGCGCCTGATAGAAATAGTCGATCGCCGTTGAATGCTGCTCTAAGGTGAGATGAATGCTTCCCAAATTATTCAAAGCCTTGCTTTCAGCCTCAAAATCTTGCATCTTTGCAGCCAGGTTTCGCGCTGCAAGGTACTGATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCAAAACTTCTTCGGAAGTTGAACTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 16070-18445 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPO010000037.1 Microcoleus sp. FACHB-1515 contig37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 16070 35 100.0 35 ................................... TCGGTAGTCCGAGGGGCAAACGTACTCGTCGCCGT 16140 35 100.0 39 ................................... TTGCTGTGCTGCTACCAGCACATCCTGTGTAGAGAAGCT 16214 35 100.0 34 ................................... TTGGATGTCTTCCACAACCTCAGGCTGTTGAGGG 16283 35 100.0 33 ................................... GATGCATCGTGTTCATCGCAGACTCCAACGATT 16351 35 100.0 36 ................................... CAGTTGATTGTCTGAGTCATCAACACGTGAAGGCAT 16422 35 100.0 37 ................................... CCAATCGAGTTCCTTTGAACTCGAATACGTCTCGCCC 16494 35 100.0 36 ................................... GAGGTCGAGAGCTGCTTGCACGAAGGCGTGCAAAAA 16565 35 100.0 35 ................................... CACCAGTGGCAGGGCAAAATAGCTCCTGCTCAACC 16635 35 100.0 35 ................................... ATTACGACTTTAACTTCAGGCAACTTATACACCTG 16705 35 100.0 34 ................................... CGGGTGTCGGCAACCCAACCCCCAAACCCCCTAC 16774 35 100.0 38 ................................... GCTTGGTTGCCAATTTCTTGGTCAACCACAGCCTCAAA 16847 35 100.0 36 ................................... ATTCCCTCTAATTGAGCGATGACAGAAATGTCACCA 16918 35 100.0 33 ................................... ATTGCAGCGGCACTCGTCAAAACGCCATCAACG 16986 35 97.1 36 ..................................G GCATTAAAGTACCTCCGAGCAATAATCCGTTCAAAG 17057 35 97.1 38 ..................................G GAGAGGGTCTTCAGGCACTATCATTAGGACTTGGAGTT 17130 35 97.1 36 ..................................G GTTCCATGCACAGTCGGCCTCGCATCTTCCGCGGTT 17201 35 97.1 38 ..................................G TGGTAGATTTCGACCGCGGGGGCGGGAGAGTTTCTAAA 17274 35 97.1 37 ..................................G ACCAGCCAAGCGAGCAACTTTGGAATAAGACATGAAA 17346 35 97.1 40 ..................................G TCACAATCGCTTGTGTTGGAACCGTGAACCCGAGGCATTG 17421 35 97.1 34 ..................................G TTTCGTAATCTGGGACTTCGCTTTTTGTAGCGAG 17490 35 100.0 37 ................................... CAGGATTGATGGCATTTGTGAAACCATCATTGCTCAG 17562 35 100.0 36 ................................... CTGCTGCTTCAGCATTTCGAGTGCGGAAGCGGACTG 17633 35 100.0 34 ................................... AATCTTCTCTAAGGAAGATTGAAAATACCTGCTT 17702 35 100.0 36 ................................... CAGGAGGGTTGATTCCCAACAGTGCAGCACGAGAAG 17773 35 100.0 37 ................................... TAGGCTGCTGATTATTCGTCAAACAACAGGTGCATTT 17845 35 100.0 34 ................................... GAGATTCAGTGGCTGCGGTGGCGATTTGGTAATC 17914 35 100.0 40 ................................... CATTTGATAGAGTGCCGGCATCGTGGTCATAGTAAGTGCC 17989 35 100.0 36 ................................... CTGTAATGTTGAAAAGCGACTAACCTTGGCTTTCGG 18060 35 100.0 36 ................................... GCCCGCTCGTTCCTGGTGCCACTGATCCGGGGATCA 18131 35 100.0 36 ................................... TATTGCCTGTTTTGGGCAGGAATCAACCGTCCAAGG 18202 35 100.0 36 ................................... ACCGTAGGAGGTACCGACACGCAGCCTTCGGGGATA 18273 35 100.0 35 ................................... GGTGTCGGGATCGGATGCGCCTTGCACGTTTCCGT 18343 35 100.0 33 ................................... CAGGGGTGCCGTTGACAGTTCCCACCAAGCAAG 18411 35 91.4 0 ................................GTT | ========== ====== ====== ====== =================================== ======================================== ================== 34 35 99.1 36 CTTGAAACTTCTTCGGAAGTTGAACTAATGGAAAC # Left flank : GAATCGTCAGCGGCTATCGTGATTTGGAGGCATTGTTCTCTGAGGAGTCGCAGGATTAAGCCAACGTGAAAGCGATCGCAACGCACTCACTTCCACCCGGTCAGCATTTGGACGATCGAACCATCGACTTTTTCTAAAAGCCGATCGCTTCTCACAAAACTTTCACACACCCAAACTTGGAGCAGTCGATCGATCGGCTGCTTTTTGCTGTGTGGGGCGATCGGCTCTCTGGGTTATCATGCGTTAGCGGTGAATGGCCTTTGGAATGTGGTTGAACTGAGGCAAAAAACGGCGTTTGGCGGGTGTTTCAAGGGGGTGATCGAGATGGCTGAAAGACTGATTCTGTCGTTGACCCCCTTGAATGCCTTGCTGGGAGCGGGTTTCAGCCATTTTTCCAGAGGTCTTATTGCGAAAATTTATCAATTGTGGCGGGCAGTGGTTGACCCCCTTGAAAACATGGGTGTAGAATGCCCTCAGAGCAAGGCTTCTAGGAGCCAACC # Right flank : TCCGTTTTGATTTCGATCGCCCCTAAGAATCGACTCTTATGAGATTCTTTGAAACTTGGGGTGATTGAAGCATTCCGTAGATCGGATAGCAGCAAATTGAAAAGTGAACCGCTGGAGTGGCAAGCGCTAGTTAATCACTCCAGCGGTTATTTTTTTTCTGATGGCAAGTCTCCGTTGCTGGAAGGGCGATCGATAGGGCAGACGCGATTGTCCCAGTCAAATCGACAGACCCACATTTTGGTAGCAAAACTAACAGTAAACTGTCACGAATCGATCGAGCGGTGTCAGCGATCGCCCTCGTTATTTGCTTTGGCTGCTCACGGATCTAAAGAAAATCTGGTGTATTTCGTCACCTCGAATGATTCCTGATATGCTCGCCTTTAGTCATTCGCACGAGATTAAGGAATATTTCAACCCGCCTTTTCTAAACTGAATCCATCGATCGCCACCTCTGGTACTTTATGGACTACTACAGCCGCAAGCTCTATGCGCTCCTCCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAACTTCTTCGGAAGTTGAACTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 21248-15421 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPO010000090.1 Microcoleus sp. FACHB-1515 contig90, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 21247 37 100.0 36 ..................................... TTCTAGCGCCTTGATTCCAAAGCAGCAAAGTTCGCA 21174 37 100.0 35 ..................................... TTGCGAACGCAAACCGATCGCGCTGCGTAGAACGC 21102 37 100.0 34 ..................................... AATACCAGCAATATTCCAACCTACACCGCAACAG 21031 37 100.0 34 ..................................... TTCGGTAATGCCTTGTGACTGGGCAATGAATTCG 20960 37 100.0 46 ..................................... TTGCAACTTGGATCTGCTGCTGCTCAACCTGCTGCATCGCTCCGGT 20877 37 100.0 34 ..................................... ACATTGACTTCTGCCTGACTGTCAAAAGCTTGGA 20806 37 100.0 36 ..................................... GGCTGCAACTGATCCAACTTTGCTGATTTTTGCCCA 20733 37 100.0 33 ..................................... CCATCAGGATGCCGCAGGTGTAGCAGGCATCTT 20663 37 100.0 35 ..................................... CAACGCTTGATTCTGCCGCGAGTTGCTGTGCAAAC 20591 37 100.0 34 ..................................... TTTCACGCCGCTGTAGTTGCGAGAGATGAAGTTT 20520 37 100.0 33 ..................................... TTGCTTGTTTCGCTTTTTGGGTTAATCTTCCTT 20450 37 100.0 35 ..................................... TTACTCCTCCTTCGACTGGCAGAAATGCAGATGGA 20378 37 100.0 34 ..................................... TCAAATCCAACACCATCTAGGGTGAAAGTGTACT 20307 37 100.0 35 ..................................... CTTCCCGTCGATCGCTGCCTGTTGAATCATCAGCG 20235 37 100.0 35 ..................................... ACCAGCGGCGATCGTGTCGGGGATTTCGATCGAGG 20163 37 100.0 36 ..................................... CCTGCTTTCCCAAAGTGCAAGCTTTAGCTGCTCGTC 20090 37 100.0 36 ..................................... ACTCATGCAGAATTTCTAGAAGTTGGCAACTTCCAA 20017 37 100.0 34 ..................................... AGATTAACCGATCGAAACAAGCTCAACACCACAT 19946 37 100.0 34 ..................................... TGTTGTCAAGGGATTGGCGATGGATACTGAAAAT 19875 37 100.0 34 ..................................... CAAAGCAATTGCAGCAGCAGCAACCTTATTCGAG 19804 37 100.0 34 ..................................... CGGCTCGGCGTTGTTCTCCCCTGGCTTTTTCCTC 19733 37 100.0 34 ..................................... CGCGCTGCAAGTAACGATCGATGAACTTCAAAAA 19662 37 100.0 36 ..................................... AATTAAAACAAAAGAGACAAAAACATGAATCCTGAG 19589 37 100.0 35 ..................................... CGATCGGCAAAAACCTCAATTTGATGGGAAATCGA 19517 37 100.0 36 ..................................... CCGCTTCAACCAGCCAGCGATTGTATTGCTGAATCG 19444 37 100.0 34 ..................................... GAACTCTGCCAGTGGCACGGGGTGCAGTAGGCTC 19373 37 100.0 35 ..................................... TACGCCGGAATCAGCAGATCGAGCAAGCTTAGCTG 19301 37 100.0 34 ..................................... CTGATAGGTGGAATGCAGCTAAGCGTCATGATGC 19230 37 100.0 34 ..................................... ATCTTCAACCGCACTCCTGCACCTAAAGCACCTC 19159 37 100.0 35 ..................................... TACGCAGCTTTTCTCTGCCAACTGCGATTGAAAAC 19087 37 100.0 35 ..................................... AAAATGGATTCAAACAAATTGAACGCATTCAAGCG 19015 37 100.0 34 ..................................... AATCAACTGTTTGTCAGAATGGATGCATCGCAAG 18944 37 100.0 37 ..................................... AGGCAAGCGAATCCCCACTGAAACGGAACGGGAACGG 18870 37 100.0 34 ..................................... TACGATAACCCTGCCCTACTCAAGTCAAATCCTC 18799 37 100.0 42 ..................................... TTTCATCTGCAAGAAATAGAAGAATTTTTTACAAAGCGACAA 18720 37 100.0 35 ..................................... TAATAACATCCAAAGTTTTTTTAATATTCCTTTAG 18648 37 100.0 37 ..................................... TCAAGTCTTGTATGATTCCTCCTAGCGCTGCTAATGC 18574 37 100.0 35 ..................................... TCATTATTTAAGCTAGCAGGTAAGTTTATTGCTGC 18502 37 100.0 35 ..................................... TGGCTGAATCCACCGTACAGCGATCGCGACCCTGT 18430 37 100.0 38 ..................................... AAAACGTCGCCTGTACGCAATTCTAGTTGACTGCGAAG 18355 37 100.0 35 ..................................... CACTTTCCTCTAGATTCTACTAGCTTCTCAGGATC 18283 37 100.0 35 ..................................... TGGATATTTACACCGAAAGGAGATTGAGCATTAGG 18211 37 100.0 33 ..................................... ATCTTTAGATCCTAAAAATATTGCTTACCTTGG 18141 37 100.0 34 ..................................... ACGCCCTCAAATCGCGAAAGGGGTGAAATGTGCA 18070 37 100.0 37 ..................................... GTCAACAGGCTTATCGGATCGAAAATTCCACCTTCGC 17996 37 100.0 36 ..................................... CAGATGATTGCCATCAAAGGCATTGCGCTGTTCAAC 17923 37 100.0 35 ..................................... TCGTTTACAACGTTTGGAAAAAGCAATGTTGAAAT 17851 37 100.0 35 ..................................... ATGGAGTTAATTTCTTTGGACGTTGTGACCTTTTG 17779 37 100.0 36 ..................................... AACTGCGGTTTAAGGCTGACCGCAAACCCGATCGAT 17706 37 100.0 36 ..................................... TCCCAGTAGCGCTTGCTTTCTTCAATCTGAACTTGA 17633 37 100.0 36 ..................................... ACAGCGGCGTGTTCGGCGGAAGGATCGGGCTATTTT 17560 37 100.0 35 ..................................... GCGGTGAACGTGGTCGATCGCACCAGACGAAACGT 17488 37 100.0 36 ..................................... AGCAATGCCGCGATTTCAACCATCACGCAGCGCGAT 17415 37 100.0 34 ..................................... CCTATTTACAAAACTGACGATGAAACTGTTTCTT 17344 37 100.0 34 ..................................... ACTCATTGGTGGCCGCGCCGCCTCCGGGCGACTG 17273 37 100.0 35 ..................................... TGGTGCTTACTTGCTTCGTTGCCAGTTGATCAGGA 17201 37 100.0 37 ..................................... CTAGAAGTTCCAGAAGTTCCGGCTGAGGAACCACAAT 17127 37 100.0 35 ..................................... CTCATGCCATGCACAAGCACAAACAGCGCCACACG 17055 37 100.0 38 ..................................... CTTTCGCACATGATGCTGGCGAATGAACTCGACATCAA 16980 37 100.0 35 ..................................... AGCGACGGTGACTTTGAGTATCGCAACGACATTCT 16908 37 100.0 36 ..................................... CCCGACCTTGGAGCTTGAAGCTTCGATCTCCAAGTT 16835 37 100.0 35 ..................................... CCGCAAAGCACAAGTCGATCGACTCAGATTCCAGA 16763 37 100.0 37 ..................................... GTTTTCAAATGTCATGATGTGAATCTCGATAGCTGGT 16689 37 100.0 34 ..................................... TGGGTTGATGCCTCGATCGACTCCAATCAGCCTT 16618 37 100.0 38 ..................................... AGCGTGTTGCTGAGGCGGAAGAAGCCGCACTGATTCTG 16543 37 100.0 35 ..................................... CGGTCATCGTGCCGGAGGAGCGCGGCTTTCTGGAG 16471 37 100.0 34 ..................................... TGCCGTCTTTGCCTGGGCGCTTCAATGCCCGATA 16400 37 100.0 35 ..................................... AGGCAACGATCCCGGTGTAAACGGTGATTATGAAC 16328 37 100.0 34 ..................................... CGATTGTAGACACCGCTAAATTTTGGTTTCACAA 16257 37 100.0 34 ..................................... CTTTACTGATTGGAATCTCAGGCGCTCCAGCCTC 16186 37 100.0 35 ..................................... GATCGCCAATTAGCGGATGAAATGGTCGCCTCGAT 16114 37 100.0 35 ..................................... TTAGCATTTCAAACGATAGCAGTAGCGTTTCTTGA 16042 37 100.0 35 ..................................... CGTAATCAGTTGTTATGAACCATTCAAGCGAATAG 15970 37 100.0 43 ..................................... AATGCTCTAGAGACATGGCGCGGATGATGTCTGACAACCTCAG 15890 37 100.0 35 ..................................... ACGTTCGATCGGAACAATTTCAACTCTTCCATCCG 15818 37 100.0 34 ..................................... TATTTGCCCTTGGTCTGCTGTCTGTTGTGCCGTC 15747 37 100.0 35 ..................................... CACCAGTGTTAACCTCTAGTTCCAACTGAATAGGA 15675 37 100.0 34 ..................................... GAAGCGATCGCCATCCAAGCAACCGATTGGAGGC 15604 37 100.0 38 ..................................... GCAATGGGGTGTTGTCGCTCCTGACGTGTACTATGCCG 15529 37 100.0 35 ..................................... CCTTCCGCTTACGCTCGATCGCCGCTGCGTAGCTG 15457 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 81 37 100.0 35 ATTGCGATCGACTCCAAACCCTTTCAGGGATTGAAAC # Left flank : GCGTTTGCCTATCAAGCGCGATCGGAAGATAAGCGGGTGGAGTGGCTACCGGAACGTCCTCAAGTCCGACGTGTGATTCGACAGGTTTCCAGTACATTCTGGCTGTTTCGAGATATCTTGCCTTACGGTAAAGACTGCGTCATTATTTCACCTGAACTGGTGCGCGATCGCTTTCGGCAAGAAATCACCACCCTGCTCGATCGATACACTGAATCATGAAGAGAAGCACGACAATCCAATTGGGGAGCGTTTGCGCGAATGGGTAGGTGTTCAATTCAAATCTATTTGTGTGTAGGCTGAATTGCATGTGGGTTGAGTGTTTTAGCTGATCTGATGGGTCGATCGATCCGCGCAATCGTTCAAAGTCATACACAGCATACATTACAGTGATTTAACTTCTATCAGCAAAACATGAGGCATAATTGAAACAGCCGATTTCTTCTAATTCCGCGCGATCGAACCTCGAAAACTACATACAGTGGCCGTTCCAGACTTCCGCC # Right flank : TGTCACTCACCATGCAGGATTGTACTAGAACGTCAGATTGCGATCGACTCCTTTATGCCGCACTGTCCTTGATAAGCTCGTCGGCTACAGAGGCTCACCCTTGCTGTGGCAGCTACACAACGGCGCGAAAAGCATGGGGCGCGTTCAAAGTGCGACGCTGCACATCGTCTGTGAGCGCGAACGGCAGATTCAAGCGTTTGTGCCGCAGGACTACTGGAGCGTGTTCGTCGATTACGCCGAAGGTTTTCGAGCGTACTATCAGGGCAGCACTGAGACTGAAGCAGAACCTGCTCAATCAGACGATGCTGCTGAAAAGACGATCGAGCCATCGCTCGAATCGACCAAAGTATTGACGCAAGCTGAGGCCGATCGACTGGTCGCTCAAGCGCAACAGCACCCGCATCGCGTTCTGAGCGTCGAAGGCAAAACCGCCACCCGTACCCCACCCCCCGCCTTCATCACATCGAGCCTGCAACAGGTCGCAGGTGCAAAGTTACGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCGATCGACTCCAAACCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA // Array 2 32705-36087 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPO010000090.1 Microcoleus sp. FACHB-1515 contig90, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 32705 37 100.0 39 ..................................... GTCGCCCTGCTCCTGAGCAATCCTGACATACTCACGCGC 32781 37 100.0 36 ..................................... TTGGAAAGGGTAGACGATCTGAGATTATTTTTCATA 32854 37 100.0 36 ..................................... AGGGGATTTTCCATCCGATCGAGTTCTGATCCACGT 32927 37 100.0 39 ..................................... ATCGTCATTATCGCCGCCGGACTCATAAAAACAAAAAGC 33003 37 100.0 37 ..................................... TTAAGGGATCATTTGAGGAAATGTCAGAAAATTTTAA 33077 37 100.0 36 ..................................... GATATGCAGAGCGGCAAAATGCTTCCAGATGAAAGA 33150 37 100.0 34 ..................................... ATGAAATTAGGATCGCATTTTTTGAGGCTACATC 33221 37 100.0 41 ..................................... ATAGTGCCACCTGTTGTAGTTCCTCCTATTGATGGTGAAGA 33299 37 100.0 35 ..................................... CGCACCGTGCGGACGACGCGCCGCGAACCGCGCGG 33371 37 100.0 35 ..................................... GGGCGTTTCCCTCGTGACTGAGGACGACAAACCCA 33443 37 100.0 34 ..................................... TCGTCGCTCTAAAGGCATGTCGCCCGACAAGGCG 33514 37 100.0 35 ..................................... AATAAGGTGCAAGCCTTTCGCGCCATTGCTGAAAT 33586 37 100.0 35 ..................................... TTTACCAAAATGCGTTTGCAGGTAGCGCAGCAGTG 33658 37 100.0 34 ..................................... CGGCAAACGCTGACCCTGCAAGCGGTTTAAATTG 33729 37 100.0 35 ..................................... GCCGTCTTGCCGCTTGAGCGATTCTTCGGTTAGCG 33801 37 100.0 37 ..................................... CCTTCTTGCAGTTGCAGCAGCAAATACTCTGCCGCGA 33875 37 100.0 35 ..................................... CTGGTGTCATCGCTTATCGAGGCGCGTGGAGGCGT 33947 37 100.0 36 ..................................... TTGCGATCGCGCCATGCGCCAAGCGTGACGTGGCTG 34020 37 100.0 35 ..................................... TGAAGCGCTGTGTGCAAAACTGCGGGCGGAATCTG 34092 37 100.0 36 ..................................... ACCTGGGCGAGTTCCCAAATACACAGCAAGTAGCGA 34165 37 100.0 34 ..................................... AAATGACCGTTGATTCTGTCAAGGGCGGACTGAA 34236 37 100.0 40 ..................................... CGCGTCGATCGACCCCCAATAGCGCCCCAAGTCGATGATG 34313 37 100.0 34 ..................................... TGAGGACTGCGTCGCTGAGGTCTGCGCGTCTGAG 34384 37 100.0 35 ..................................... AAACTGTCTGGACTGACCCAGTTTTGACTTGATAA 34456 37 100.0 33 ..................................... TCGCCAGATCCTACGCTTCCGGCTCGCATCCTT 34526 37 100.0 35 ..................................... ATGTTGAGCGCGGTATCGGCCTTGTCGCGCACCTG 34598 37 100.0 40 ..................................... GCCAGTAATCTTGCAACTCGCAGGTAGAATCACACTCCGG 34675 37 100.0 34 ..................................... TTGCCATTGACGCGGAGCCAATTCGCCGTGCCCG 34746 37 100.0 35 ..................................... CGATCGCATGGTGGCAAAATCGCAAGAGCAGCAAA 34818 37 100.0 35 ..................................... TTTCATTGCGGCCTGCTCTCAGGTGGCCTGCTGGT 34890 37 100.0 35 ..................................... ATCACCTCAGAGGGTAGCAGCGGCCAGCGGCTCAC 34962 37 100.0 35 ..................................... TTGATTGATTCCTGTTTCAGTTGCAAGCTGCTCAT 35034 37 100.0 34 ..................................... CCCGTCGTGCTGTTGTAGCTTAGCGGCGATGCAG 35105 37 100.0 34 ..................................... CTCAAGCAGCGCGATCGACCAAAACGCGATCGGG 35176 37 100.0 35 ..................................... CAGCTTCTACTGGCAAGTCCACTGCTACAGCACGG 35248 37 100.0 36 ..................................... AAGTGATTTTGCCACAATCCCTGCTTTTACACTGCC 35321 37 100.0 35 ..................................... CAGGTGTTGCGTCAAGGCAAGACATACTCGTTAAA 35393 37 100.0 40 ..................................... TCGAAATCGACAGAGTTTGGAGAACGACATCGTGATTGGC 35470 37 100.0 36 ..................................... AACGGTAATCTGACTTTCCGCAATCTTTCCACAACG 35543 37 100.0 35 ..................................... GTACTGAGCTATCGCGCTGCTGCCCTGATCGATCG 35615 37 100.0 35 ..................................... AGCGAAATCGGTCTAAACAAGTTTCGTGTTAGCGG 35687 37 100.0 36 ..................................... ACTCATCTTTCGTGCAAACAGCGAAGGGTTGATGGG 35760 37 100.0 34 ..................................... CTCAAGGTCTGGCATGGAATACCAGACCTGTCCA 35831 37 100.0 33 ..................................... GGGAAGCTGCGCCCGAAGGAAGCGAAGCTCCCG 35901 37 100.0 35 ..................................... CTTTGTGATTCGCCGTCCGCCATACAGCCGTCGCC 35973 37 100.0 36 ..................................... ATGCAATGATCTCGATCTTCAGCCGAATTTGTCCGC 36046 37 97.3 0 ....................................T | A,TGT,A [36073,36077,36082] ========== ====== ====== ====== ===================================== ========================================= ================== 47 37 99.9 36 GCGACAATTTCATCTAAACCCTTTCAGGGATTGAAAC # Left flank : CATTCCTGAAGACAAACGCCGATCGAAAATCCACAAGATTCTCAAATCCTACGGTCAGTGGATGCAGTACAGCGTGTTTGAGTGCGATCTGACCGAGACGCAGTATGCAAAGTTGCGATCGCGCCTCCACAAACTGATTAAACCCGATCAAGACAGCATTCGCTTCTATTTCCTGTGCCGCTGCTGTCAAGCGAAAGTGGAGCGAATTGGCGGCGAAGCGGTTCGAGATGACACTATTTTCTTCGTGTGATGCGCGGAAGGGTGGGTGTTTTGAAACGCTTGAGCAAACAAAAGGCTGAAACTGAGGCGTTGACCGAGCTTGAGGCATTTTTCAGTAAAATGAGTTCCGCGCAGAGGCTGAAAAGGTGGCGGGGTTTGAGGTGTAAGGGTTAAGCTAGGCGAATGATTAACCTGATTGAGCATCAAAAATGCTACAAACTAGGCGATCCGCGCAATCGAACCTTGAAAACTACATACAGCAAGTGTTTCAGGCGATCGCC # Right flank : ACGGAGAAGGTTGCAAAAGACTCAGGCCAGTGTGCGTAACATCAGTCGAATCATCGCAATGTAGATGAAGGCTTCAGACGAAGCGGGCAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGACAATTTCATCTAAACCCTTTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.90,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : NA //