Array 1 1333985-1337984 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP076718.1 Rhodocaloribacter litoris strain ISCAR-4553 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1333985 29 100.0 32 ............................. TATCTGGTGCCGGTCGTTCCCGCCCCCGGCAT 1334046 29 100.0 31 ............................. AAATGGCGCGCCGTGAAGCGCTCAAGTTCGA 1334106 29 100.0 32 ............................. GCGCGGAAGCCGAAGGCGAAGGCCGAAGCGAA 1334167 29 100.0 32 ............................. TGCTACCGCAACCCTTGATGTATGCGGCGGAA 1334228 29 100.0 32 ............................. CGGATCTGATAGCGTTTCATGGCTGTCACCTC 1334289 29 100.0 32 ............................. CTAACGCCTCGCGAGTTTGCCCGGCGCGCAGG 1334350 29 100.0 32 ............................. ACCGGCTTGCCCTGGAGCAACGCAGGCTTGCT 1334411 29 100.0 32 ............................. AGCCGCGCGTGCTCGACGACGCGCTCCTTCAA 1334472 29 100.0 32 ............................. TACTTTGCGGCGGTAGTCAGGTGCATCAGACC 1334533 29 100.0 32 ............................. GAGTATGACCGCGGCTTCGACAAGCGTATCGG 1334594 29 100.0 32 ............................. TCGAACAGGCCGTCCCTACCCTCATAGGTCAG 1334655 29 100.0 32 ............................. TAGCCGGGCCACGGCTCGCTGCGCCGGTCCTG 1334716 29 100.0 32 ............................. TCGGCGGCGCGGCCCACCGTCGCGAGCTGGCC 1334777 29 100.0 32 ............................. ATCTGTTGCAGAATCTCAGGACAGGCAGATCA 1334838 29 100.0 32 ............................. TAGCCGGTCGCGCCGACGGCCAGCGAGGCCAT 1334899 29 100.0 32 ............................. TAGCCGGTCGCGTTGATGGCCAACGAGTTCAT 1334960 29 100.0 32 ............................. TCGAGGCGAGGGAAAAGGAGGTTGTCGAATTC 1335021 29 96.6 32 ............................A CCCGCAGTACCTGCAGCGGCGGCATTACTACG 1335082 29 100.0 32 ............................. TAGGGGTAGGTCTTGCCGTCGAGAGTGATCGA 1335143 29 100.0 32 ............................. AGGCGTGGCCACGGATCGCGGCGTGAGGGCCT 1335204 29 100.0 32 ............................. GATCAGGATGCTTTGCGGATGGCGCTGGTAAG 1335265 29 100.0 32 ............................. CCCTGCCCGCCCCCGCCGGAGATCACCCGCAC 1335326 29 100.0 32 ............................. CCCACCTGGACAACGTCACCTCGTGCGGCATC 1335387 29 100.0 32 ............................. AATGGCCTGATCTCGTACGTGTACGGCCATGA 1335448 29 100.0 31 ............................. GGCAGGGGCTGTCCGGCTACGGGCTCTTTGC 1335508 29 100.0 32 ............................. GTCAGGCGCACATACCGCTACCGGCTCTACAC 1335569 29 100.0 32 ............................. TTCGAGCTGCGGCCCACCTCGACGAAGGCGGT 1335630 29 100.0 39 ............................. GCCGCCGCCGGGCGCACGGACCCGCTCGGCCTGGGCCGC 1335698 29 100.0 32 ............................. TGCGGGTCGAAGTCGTGCACGAGGCCCGGGAT 1335759 29 100.0 32 ............................. AGCAGCGCCCGCAGCCGGCGGCTGCGCGGCCC 1335820 29 100.0 32 ............................. GTGCTCCCGGTCGATGTGAAAAAAGTCGTGCC 1335881 29 100.0 32 ............................. TCGCCTTGACTGTGCTCATAGGGGAGACATCA 1335942 29 100.0 32 ............................. AACGAGGCGGTGCGCCTCCGGATCGCCTTTCA 1336003 29 100.0 32 ............................. ACGGCGTCCTCCACCGACACCAGGTCGCGGAG 1336064 29 96.6 33 ............................A GAGGAGGTAGAGGAGAACCGCGTGAGCTTCGTG 1336126 29 100.0 32 ............................. AACGAGGCGGTGCGCCTCCGGATCGCCTTTCA 1336187 29 96.6 32 .......................A..... CTCACGTGGAGCACCAGCCAGTAGCTCTGCAG 1336248 29 100.0 32 ............................. GCCAACGCCTCCAAGCATAAGGCCATGAGCTA 1336309 29 100.0 32 ............................. AGGGGAGGAAGAACCGCTGGTAGAAGCGCTCC 1336370 29 100.0 32 ............................. CGCCGGACGCCGCCCTGCTCGGGCGGGGCCTC 1336431 29 100.0 32 ............................. AGGGGAGGAAGAACCGCTGGTAGAAGCGCTCC 1336492 29 100.0 32 ............................. CCTACGCGATGGCCAACTCGGCCCGCGGGCAG 1336553 29 100.0 32 ............................. GATTCGGTCATGAGGCGCATGGTTTCGTCCCA 1336614 29 100.0 32 ............................. GACGAGCGGCCGACCTGAACCTGCTGGGGCCG 1336675 29 100.0 32 ............................. ACAGGAAGCGCAGCGACGCGCCTCTTGCGCGA 1336736 29 100.0 32 ............................. GATTCGGTCATGAGGCGCATGGTTTCGTCCCA 1336797 29 100.0 32 ............................. GACGAGCGGCCGACCTGAACCTGCTGGGGCCG 1336858 29 100.0 33 ............................. CTGGCGGCGCTCATCGCCGAGCGGGCGCCCTCG 1336920 29 100.0 32 ............................. AAATGACATTATCTGCGCCGAAATAACTCCTG 1336981 29 100.0 32 ............................. CAGCTGCACCCGCTTGCAGAACAGGGGCCAGT 1337042 29 100.0 32 ............................. AAAGCGGTGTTCTACGGCAAGGACACCAGGGG 1337103 29 100.0 32 ............................. TGACAGGCGTCTTGGACGGGTTTGAAAGCAAC 1337164 29 100.0 32 ............................. GACGCCGACCGGATCGTTGTCAACAGCGTTGG 1337225 29 100.0 32 ............................. GAGCGGGGGGAGGCCGGGCGCGACGGGCCGGG 1337286 29 100.0 32 ............................. GGTGGGGCTGTTGAAGGCGAGAAAGCCAACTC 1337347 29 100.0 32 ............................. GATTCGGTCATGAGGCGCATGGTTTCGTCCCA 1337408 29 100.0 32 ............................. GCTGCGCTCGATGGTCGCAGTCACACGAATAA 1337469 29 100.0 32 ............................. TCGCCGGCGAGGCTCGTCGGGCGGCCCTGGTA 1337530 29 100.0 32 ............................. GCCGCCAGCACGTGCTCGGACCCCCGGACGAC 1337591 29 100.0 32 ............................. ACGGAAAACGCCACCGTGAAGGCGGCCCCGCC 1337652 29 100.0 32 ............................. CGCATCGGGTACACGGAATTCGACAACCTGGA 1337713 29 100.0 32 ............................. GACAAAGACCAGTTGGAGTTGGCGATCAGTTT 1337774 29 100.0 31 ............................. TATGCGCACGAGAACATGTCGTCCACATACT 1337834 29 100.0 32 ............................. CACTACGGCGGGAGGGTCCTCGACCTGATGAA 1337895 29 100.0 32 ............................. ACGGAAAACGCCACCGTGAAGGCGGCCCCGCC 1337956 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 66 29 99.8 32 CCTATCCCCACGCCCGTGGGGGTGAACCG # Left flank : TGGCCCGGATCGTACCCGACATCGACCGGGTGCTGGACCTGGAGCGTGAACTGCTGCCGGACGGCTTCGACCCGGACGACGACCCGGCCCTGCCCACGCCCTGGTGGACGCCGCCGGGGGGAGGAGACGGACAATGACCGTGATGATCCTGGAACGGGTGACACCCTCGACCCGGGGCGACTTGAGCCGCTGGATGATCGAGGTGAAGACCGGCGTCTTCGTCGGACGCCTCTCCGCTCTCGTGCGAGACAACCTCTGGAAACGCTGCCTGAAACTCACCGAGAACGACGACGCCACCCTCATGCAGATCTGGTCCACGAACAACGAGCAGGGATTCGATCTGCGAGTCCACAACCCGAAAGGACGCTTTCCCTACCAGAACGAAGGGATCTGGCTCGTGATGGTGGCCGACCCCGACCCGCGCCGGGAGCCCTGAGCAGCGCAGACCCCAACCGGAAACGTTTCGCCCGATATCGGGGTTTTTGGCGTCGTTTTTTAGA # Right flank : GGCACCGTCATGATCGTCGACCAACAAATGCGCATTCGGGGCGTATATCACAGCGCAGACGTAGACAGGACGTTCGAAAACTGGTCGCGTGGGCAGTTTGGCTGAGAACCGGACGTTAGAACTGGCCATAGCGGAGGCCGCCGAATTCGAGCCCGGGCGCTATCCGGGAGGGCTCGCGGTGGCCTTCTTCCGCCTGATGGACGTGCCGCAGGACAAGACGCCCGACCGCTGGGCGGAGCTGCGCCGGGCCCTACGCAACAACCCCCACCTCGAGGACCCCGACGTGCAGGCGTTCCTGTCACGGCCGGACCTGGCGGCCCGAGGCTACTGGTGGTTCGACCCGGAGCGGTGGTGATCGGACGTTCGGCCGCGTCTGGACGCGGAACGCGTCCAATCGGCCCAACGCGTCCGCTTTGCCACACCTCTTGCTATAAATCGTGGTAGATGCTGCAGGTGATGCGGATTAGGCTGCGGGCAAGAGGCCCTCATGCCACCATCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTATCCCCACGCCCGTGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGATCCCCACGCGCGTGGGGGTGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2680208-2676301 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP076718.1 Rhodocaloribacter litoris strain ISCAR-4553 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =========================================== ================== 2680207 30 100.0 38 .............................. CGATGACGCGGACGAGGTCGTCGGCCTCGTCGTCGCCA 2680139 30 100.0 38 .............................. TTTCCAGGGTTTCGCTCTTGTGCCGGACGACCATGCGA 2680071 30 100.0 36 .............................. GGTGATGATCTCATGCTCCTCGTCCCACAGCTCGAG 2680005 30 100.0 37 .............................. CGGGGCAGGCCCTCGCCGTCATCGACGCCCTCGTCGA 2679938 30 100.0 35 .............................. GGGAACCCAGCTCTTGAAAAACGTGGGCCGCCCGT 2679873 30 100.0 39 .............................. GCCTGCGTGTCGATGTCCCCCACGGGCCGGTCCTGACCC 2679804 30 100.0 36 .............................. TGTGCGTGACGCGGCGGATGTAGTCCGCGATGCCGC 2679738 30 100.0 37 .............................. CGGGATCGCCGGTACGCCTCTCCGGCCTGTGGCTCCT 2679671 30 100.0 36 .............................. GATGTTGGCGATGCGGGCGTGCAGCCGGGCGATGCG 2679605 30 100.0 38 .............................. GCGGGCCCGCGAGGATGCCGAGGCCATCGCGGAGACCG 2679537 30 100.0 36 .............................. GCGTGAATGGCTGGGCCAGGGAGATCGTGCCCTCGG 2679471 30 100.0 36 .............................. GAAAAACTCGGGAGTGATGCTGACGCGGGGCAGGAG 2679405 30 100.0 35 .............................. CCGTCTCGTGGGGCAGCATGTGGTCCGTGACGGGG 2679340 30 100.0 36 .............................. TACCCTCCGGTGGATCGCCTCAGGCGGTCGTCGAGG 2679274 30 100.0 40 .............................. ACGGCTGGCTGACGTCACATTCGTTCGTACCAAACTGAGA 2679204 30 100.0 35 .............................. GACGCCGCCCTGCTCGGGCGGGGCCTCGCCGCCGG 2679139 30 100.0 36 .............................. TCTCGAAGTACACCATCTACCGCGTCGCCAACGACG 2679073 30 100.0 36 .............................. GGGCGGCGCAGCCAGGATGCGCAGGCCGCCACGAAC 2679007 30 100.0 35 .............................. GTTACATGGTGCGCGTCGAGGAGGGGCGCAGGCGA 2678942 30 100.0 36 .............................. ATAGCGACGAGCGGGCTGGCAGGGTCGGTGTTGCGG 2678876 30 100.0 36 .............................. GTTCAACCTGGGCAGCCCCCTGCGCCACGGGACGCC 2678810 30 100.0 36 .............................. GAGGAGGCGGGCGTCGCGGTAGGCGCACGCCGTGGG 2678744 30 100.0 43 .............................. GAGGCCACCGTCTTCACGACGCCGCCCGCGTCGATGTAGGTGG 2678671 30 100.0 39 .............................. ACGATCTCGCCCAGGGAGCCCGGCTCGAACCGGTCCCAG 2678602 30 100.0 37 .............................. TAGGCCGCATCTCGGACGCTACGGGTACGGCGCACGT 2678535 30 100.0 38 .............................. GGACGCAGACAGGGACGATGAGCTGTGCCGAGGTGCTG 2678467 30 100.0 37 .............................. ACGACACGGGGGCGTACGGGCAGGATGCGCGGGACGC 2678400 30 100.0 37 .............................. AGGGCGTAGACAACCTGCTCGACGAGGCCGGCAGTAG 2678333 30 100.0 38 .............................. GCTTCCTCGGCCTCCTCCTCGGTCATACCCGTCTCACA 2678265 30 100.0 38 .............................. GCTTCCTCGGCCTCCTCCTCGGTCATACCCGTCTCACA 2678197 30 100.0 37 .............................. CCAGCGTGGCGTCATCGCGCTGCATGGCCTCTTGCAG 2678130 30 100.0 38 .............................. CTGGTCTACGCGAGCACGGATTTTGACGTGTACATCGG 2678062 30 100.0 36 .............................. AGAACAGTCCCGAGTCCTCCAGGGCGGCCGCCAGCA 2677996 30 100.0 37 .............................. TCCTCGGCACGCCCTAGCCCGGCACGCAGCCAGGCCG 2677929 30 100.0 36 .............................. TGGCGTACCAGATCCGCACCAACGCGGACGCCGGGG 2677863 30 100.0 37 .............................. ACTCCTGGTTGAAAATGTCGTTGGCGCGGCGCGCCAG 2677796 30 100.0 37 .............................. GGCAGCAGTTCGACGAGGCGCTGGGACACGTTATCCG 2677729 30 100.0 36 .............................. GCATGTTGCGGGGTAGCGCCACCACCCTCTGCTCAA 2677663 30 100.0 36 .............................. GTGTGGCGCGCACCTGCCTGTTCTGGTATCTGGCAA 2677597 30 100.0 37 .............................. CCTGGGACAAGGTGGTGAGCACGGCAGAATCTGGAGA 2677530 30 100.0 36 .............................. TCTCGTAGCGGGCGGCGGCGCGGTAGTCCTGGACGG 2677464 30 100.0 37 .............................. AGGGAGGAAGAGATCGTTGCCGGGTTCATAGAGCTTC 2677397 30 100.0 35 .............................. TCGAATACATGAGCCTCGGCGCCCGCGACGGCCTC 2677332 30 100.0 40 .............................. TGTTTGATACGGCGAATCGGTGATGGCGTCGAGTGGGATG 2677262 30 100.0 38 .............................. GATAAAAAAAAGGGGGGGGAGCAAAGTCGGGGGGCGGA 2677194 30 100.0 38 .............................. CACGTCGGCCTTTTCTGCGATCAGACGGGCCCGCTTGA 2677126 30 100.0 35 .............................. CGTGTACGACGGCACGCACGCCGACCCCGAGCACA 2677061 30 100.0 40 .............................. GATGACGTGCCTCCAGATGGCGCAGGAGGCCAAGGAGGGC 2676991 30 100.0 37 .............................. CTTCTATTGCTGAAGACAGGTTGGTTCCTCCGAGTCC 2676924 30 100.0 36 .............................. GGTGAGGATGACGCTGGTGATGGTGCCGCTGTAGCC 2676858 30 100.0 36 .............................. ATGAACCGCATGGGGTTCGGCCAGGGTCAGCAGGAT 2676792 30 100.0 36 .............................. GGTGAGGATGACGCTGGTGATGGTGCCGCTGTAGCC 2676726 30 100.0 35 .............................. AGAGGGGGTTGGCGAGGGTGACCTGCTGGATGGGC 2676661 30 100.0 36 .............................. CTGCGTGTGCCCTGCCAGCAGGGCCGCCTCACGCAG 2676595 30 100.0 37 .............................. TCAAGCGGAGCCCGTACAAGAACATGAGCACGCGGGC 2676528 30 100.0 37 .............................. CAGAGGCGGTGGTGGAAGCGGCAAAACCCAAGAGCAG 2676461 30 100.0 35 .............................. GGTGCTGCCTCGACCATGAACTTCTTACCCGAGAT 2676396 30 100.0 36 .............................. GAATCGTTGAATTCAACGAGCCACCGTTGAATTCAG 2676330 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =========================================== ================== 59 30 100.0 37 CTTTTAATCGCACCTTTTAGGTATTGAAAC # Left flank : TTCGGTGCCCAGCACCAGGCGGCGGCTGTAGCGCACGTCGCGCAGCTCATAGAAAATGACCACGTCTTCTTCGGGATTCATGAGCCGCCTGACTTCATGCTGCAAGCGACGGAACTGGGCTTCGGTCAACTCGCCTTCGAAGACAGAGCGCTGCACCCAGGTCAGATAGCGCCGGAAAAGCTTGAGCATCTTGGCGACACGTCGTACGTTAATGTCGTAGACGGCAATGTAATATGGCATTCAGTATTCTGTTTTTATTAAAGATACACTAAAAACAGGGTCGTCGTCCACCGGGCCACGGCTTGAGGATTAATGCCTCAAGGAAGGAATCTCGGGCATGCCCCTCAATCCAAGTGTTTTACAAACAAATACTTGGAAAGAGTCGTCGGAGTCCCGGGATTTTCGGATAACCGGAGGCCGACGACGACAGATACCTTGACATTGTACCAAAAGCCGCCTATTTTCATCAAGAGGCGTGTTTTTGCTCTTTGAACCGCGGA # Right flank : AGGGTATAGCAGGGGTCATAGACCTTGAAGGCGTCGTTGCCAAGAGTGATGTAGCCGCACCCTTCACGGGTGCGCCCCTGTCCGCCGGCGCGCCCGGGCTGACGGGACGCGCAACGCGTCCAGATCCGCGGCTACACGTGCGCCGTTCGCTAAGAGCAGCCATGCCCTCATTAACAATGACCTCTGCTATACCTGACCTCCGTCACTCCTCCATCCTGCAGGTCTGTCACCACGGCGGGCCCGGCGCCCGCCCCCGGCTCATATCGGGCATTCGGATGACGTACCGCCCGGTGCAAGCCCTGAACCACGCCCCTGTCACTTTTTCGTGAGAAAATCCGGCCGAAGCGCTTCCGGTGCAGCCGCCGGCTTGGCAAAGGTGGGGACGCCACGTATACTGTTTCTCCTGCCTTTTACACAAGCCACGTCGGTCGAACGGATGCGTGTGTCCTCAGACGCCATAGCGGTGCCGGCCTGGCGGCGGGCCGTCGTCAAGGTGGGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCGCACCTTTTAGGTATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : NA // Array 3 3635327-3634741 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP076718.1 Rhodocaloribacter litoris strain ISCAR-4553 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================================================================================================================================== ================== 3635326 37 100.0 36 ..................................... GCGTATGGCGGCGTCGTCGTAGCTGCGCCGCGTCTG 3635253 37 100.0 35 ..................................... TCGACCAACCCGGCATGGAGAACACGCCATGAGCA 3635181 37 100.0 35 ..................................... AGGCTGCTGATGGCCCCGAGATACAGGCCAGCCAC 3635109 37 100.0 35 ..................................... TCGACCAACCCGGCATGGAGAACACGCCATGAGCA 3635037 37 100.0 38 ..................................... GACGTGCAGCAGGAGATCAGGCTGCCGGACGAGCGCAC 3634962 36 81.1 148 ..............T............C-..A.GC.C AGAAACCGCGCCGTCGCCAGCAGGTACAACGGAAGCGCCGCCAAAAGCACAGGTGACACGGTGATATTCTCCCGGCCGTAGCACGGGCGGCCTTGCCCGGAGCGCTATGCGGGGTTTTGTGGGAGGCCCCGCCCTGTGCCGGCGGCGC C [3634933] 3634777 37 97.3 0 A.................................... | ========== ====== ====== ====== ===================================== ==================================================================================================================================================== ================== 7 37 96.9 55 GTCGCATCCGCCCTCCGGGGCGGATGAGGATTGAAAT # Left flank : GAGGTACACACGGCGACCGATCAGATCGTCGATCAATCCCATTCGTCGCGGAGGGTTCGGAGGTGCTGATCGATCTGTTCAGGGCTTGCGAACAACCTCGGCCCGCTCCCAACGATACCGGCCAGCGGCAGCGGGGGAGGCTCTGCTTCCGCGGTATCTCCGAGCCGGACGATGACCTCCGCTTCGGCACCTTCCGGCAGCGAAGCATCCTGCACAGACACGACCCCGCCGGGCTGTACCCGCACGCGCTTCCTGATAGAAACCATGCCCGTTTTTTTTTTGATGACGGATGGCAACCACCTGAACGATGCCCGATCCGGTTCGGATCCGGGGCCGGTCTGGGACGAGGCGCCGGTCTGGGACGAGACCGAGCTGGTGCCCATCTCGGCGCTCCAGCACTACGTGTACTGCCCGCGCCAGTGCGCCCTCATCCACGTCGAGCAGGTCTGGAGCGAGAACGTCTTCACGCTGCGCGGCCGACGGGCGCACGCGCGGGTCGA # Right flank : GCGGCGATACCGTTGCGACGTCACCACGGATCGCATCCCCCCTCTGACAGCGCTTGCCTCTCAGCATCGTCGATTGTGTAGCCAACGAGGTGCGGCCAATCGGCGATCCAGGTGTGGCACGAGAAACCTCGGACCTCGACGCAAGTAGTGCTAGCGAGCCGTCGGAACAGGTGACACGGTGATATTCTCCCGGCCGTAGCACGGGCCTTGCCCGGAGCGCCATGCGGGGTTTTGTGGGAGGCCCCGCCCTGTGCCGGCGGCGCATCGCATCCGCCCTCCGGGGCGGATGAGGGTTGAAATAATATTATGAAGAACATTCCGTCTTCGGTGCTGGAGGTGCTTCGCCGGCAGGCCCGGCAGGCGGCCGCCCGGTCGCACGTACCCTACTCGAACCGCCCGGCGGGCGCAGTACTCCTGCTCGAGGACGGCCGGCTCGTGCCGGGGGTGCGCGTCGAGAGCGCATCATTCTCCTTGACGATCCCCGCCCTGCTGAACGCCTT # Questionable array : NO Score: 4.11 # Score Detail : 1:0, 2:0, 3:3, 4:0.85, 5:0, 6:0.25, 7:-1.99, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCGCCCTCCGGGGCGGATGAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-14.70,-16.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //