Array 1 14411-14561 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERKH010000002.1 Levilactobacillus brevis strain Dm-2019-67 scaffold2_size275457, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 14411 29 96.6 32 ............................C CTTATCAACTGAACCAACTGATACACTAGTGC 14472 29 100.0 32 ............................. ATTTCGAAGTGAGAAGTTTGAGCTTTCCAATG 14533 29 89.7 0 .........................A.GG | ========== ====== ====== ====== ============================= ================================ ================== 3 29 95.4 32 GTATTCCCCACATGTGTGGGGGTGATCCT # Left flank : TGGAACCATATGATGATTTCAATGTGATGGGAGCGGCATTTTGCCAAGCCCATCCGGAGCAGGTCACCCAACAGCCGCTAGGTCAGCACCATCAGGCCAGGGCGATAGGGATGCGGGCGCTGGTCGACTTTGCGCGCGAGTATTATCGAAAAAAAGATCGACGCGAGATGAGCTAAAAAGTACAAGATATAAAAGCGTAGTTGTTAGCCGCGGTGAACGGAGTAGCGGCTACGTTTTATTGTATTATATAGTCTTCTATCCTTTGATTGTATCAAAAGGTAGTCACGATACTTTGGAACAGGCTAGTGATTTGGCGGCCTGGCTACGTAGATTAAGCAACTGGATCGTTACTAGCAATCTAAGTCGAAATTACTTACAAAAGTAAGGCCACAAATTCCGATTGTTAATCAAATATGAGTAGGGTATGCTTTAATAGTCAAAGTGATAAAATTTGCTGTTTTCTCTAAATGAAAATGCTGGTATATCAAGGATTATTTAGT # Right flank : GAGGCGTTTCAAAAATGATTGTAATGCTGCGCTTAAATCAAAATAGACTTTTTATGGAAAGATAATTGATAGAACAGATCACCCAACAGGCGCTGGATCGGTACCAGTAGGCCATGGTGATAGGATGCAGGTGTTGGGCGACTCTGTACGAGGACATTATCGAAAAAAATCGGCGTGAGATGAACTTATCGAGGAGTCTATCGGGTATTCAGGCACGGGGATCGTATGTATAAATGAGGCTAGCTGTTAAGAAATAAAGTGCTGGTGGTTGACAAAGTTAATGGCTCGCGTTATATTAATAATCGAACGATCGATCTTTTAAAAGGAGCCAATCATGCGAGAAAAAGATACGGCAAAACAAACGAGTATTATTGATGAGGTCAGTAATATTATTTTAAACGAGGGAATTGCAGCAGTCTCAATGTCCAAGATTGCTAAAGCAAGTGGCATTTCTTCATCAACGATTTACGTGTACTTTACGGATAAGGAAGATGTGTTAA # Questionable array : NO Score: 3.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACATGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 158013-158285 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAERKH010000001.1 Levilactobacillus brevis strain Dm-2019-67 scaffold1_size297126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 158013 29 100.0 32 ............................. GATAATCAAGTTTACGTGAGAGTTAAGGGTGC 158074 29 93.1 32 ....................T.......C GTTCTCCGCTAATCTAGCCGTCTATGATACTA 158135 29 100.0 32 ............................. TAATGGATAAAGTCAAAGCTGCTGAAAGCGAG 158196 29 93.1 32 ..........................T.C GGCCAATGATGTTGAATTGCGCTCGGGTGTTA 158257 29 69.0 0 ..T........AT.....T...CAC.A.C | ========== ====== ====== ====== ============================= ================================ ================== 5 29 91.0 32 GTATTCCCCACGGGTGTGGGGGTGATCCT # Left flank : CGTACCCGGCCGTGTTCCATGATAATGAAGCTGGTGGGTATATCGTAACTTTCCCCGATATTGAAGAAGCTATGACCAGCGGCCAAACTCTAGGCGAGAGCCTGGTCAACGCGACAACCGTTCTCGGTCAGACGCTCCATCATCATCCGATGGTACTGCCAACAGCGACGACCATCACTGAGTTGATGCATCAATACCCCATGGCATTCATTCAGTTTGTCGCGGTAGATTTAGACCAAGTCATCGAACACGCAGTACCAACTGATCAAGCAGACCTACAATTGACTTAGTCATTGATGAAATAAAGCATAAAAAGCCGGTCCCGGTTAAAGGGATCGGCTTTTTATTATGTATGAGAGTGAGTTGTCGGATAACGAACCGGATTGCTGTCGCTACGATTCTGCGGTATGCTATAAAATATAGATGAGTCTCATGACGAAACTCATAAAAAACGCCGGTTTTTAAATTTTAAAATTCCGGTGTGGCGGCGTTTCTTTAGT # Right flank : CAGTAGTTGTTCTCTTCTAATTGCCGAATATAATAAAATAACAGCGTACCTCAATCATGGGTACGCTGTTATTTTTAGTTTACTCAGCAAGACGAATGCGAATATCGCCAATCTTTTGTTTTAGATGGTTAATGGATCTGGTTAGTGTTGTGCGTTGTTCTTCCGATGCGCTTAACTGGGCTTGGAGAATGGCCAAGCGTTCCCGCAGCGTACTATCACCTTGTTCGTAGGTAGCGATGAACTGCTTCATTTGCTTGATCGTCATTCCACATTGTTTGACGCAGAGAATGAAGTCCATTCTTTCCAAATCAGTAGTGTTGAAGTCCCGGATACCGTTGATGCGGTTAATGGGGCCGATAAGTCCCTGTTGTTCGTAGTAACGAATGGCCGATGTTGAGATGTGGTAACGCTGAGCCACAGTTTCGATTTTCAAAAATGATCACCTTCTTGACTTAAAGTATACTTTAAGTGGTAAGGTTTTCAACAACGGGTAAATCAGC # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGGGTGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.60,-10.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //