Array 1 6006-6161 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENSA010000103.1 Streptomyces sp. MBT61 scaffold103_size16659_cov89.1376, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =========================================== ================== 6006 24 100.0 41 ........................ GCTCCCACGGGGGTGTCCGGCCCGTCCGGCGTGTCGGTTCC 6071 24 95.8 43 ........G............... AGTTGGCGGACTTGGCTGCGGGCCCGCCCGGCGAACCGGTTCC 6138 24 95.8 0 .......................C | ========== ====== ====== ====== ======================== =========================================== ================== 3 24 97.2 42 GTCCTCAAACGCCGGACGGGCTGG # Left flank : CCCGGCAACAAGTCGGAGCTGGCGGTCGGCTACTCCACGCTGTACGGGGACGCGGTCGGCGCGTACGGGCCGATCAAGGACGTCTACAAGTCGTCGGTGTTCCGGCTGGCGAAGTGGCGGAACCGGGCGGCGGAGGAGCGGGGGCAGACCCCGCCGATCCCCGAGGCCTCGATCACCAAGCCGCCGAGCGCGGAGCTGCGGCCGGGGCAGGTCGACACGGACTCGCTGCCGGACTACGAGGTGCTCGACGCGATCCTGGAGATGTACGTGGACCGGGATCAGGGGATGGACGCGATCGTGGCGGCCGGGTTCGATGCGGAGCTGGTCGCGAAGACGTTGCGGATGGTGGATACGGCGGAGTACAAGCGGCGGCAGTATCCGCCGGGGACGAAGATTTCGCCGAAGGGGTTCGGGAAGGATCGGCGGTTGCCGATCACGAATCGCTGGCGCGAGTCGTCTTAGGGGGTGGCGGTTGCCGGGGGCGTCCGGCGGCCGCCCTT # Right flank : CATGGGCCGCCACCACCCGCGACGCCTTCCCCTCGCCCCGGTCCAGGAATCCCGCCGTCGCCGCTATCGCCAGGCCCGCCAGCGCCAGGACCGCGCCCACGAACGCCGGGGAGGTCCAGCCCCAGCCTGCCGCTATCGCCACGCCGCCGAGCCAGGCGCCGCCCGCGTTGGCCAGGTTGAAGGCGGAGTGGTTGGAGGCGGAGGCCAGGGTCGGGGCGTCCTTCGCCTTGTTCATGACCAGCATCTGGAGCGGGGTCGTCGTCATGAAGCCGACCGCACCCAGCAGCACCACCATCGTCAGCGCCGCCCACTGCACGTGCACCGTGAACGGGAACGCCACCAGGATCACGGCGAGGGCACCGAGCGAGCCGTACAGGGTCGGGCGCAGCGCGCGGTCCGTGAGGGGGCCGGCGGCGAGGGCGCCCAAGGTCATGCCGATGCCGAAGAGGGCCAGGACCAGGGTCACGGAGGACTCGCCGAAGCCCATCGCCTTCGTCGTC # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCAAACGCCGGACGGGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [23.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 3627-1157 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENSA010000102.1 Streptomyces sp. MBT61 scaffold102_size20381_cov85.1093, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3626 29 100.0 32 ............................. TCGGCCCGTGACTTCGCGACGTCCTCGTTGTG 3565 29 100.0 32 ............................. TAGTTGATCACCAGTGCGCCGGCCGCCGTGGT 3504 29 100.0 32 ............................. TGCCGGTTCATTGCCCCCGGTCCCTACGGCGC 3443 29 100.0 32 ............................. TCCCTCGCGGACCGGGCGGGCGGGACCCGGAC 3382 29 100.0 32 ............................. CTCATCGGGCCCGCCTCCAGTCAGCCGCCAGG 3321 29 100.0 32 ............................. ATGCCGCCCTCGGCAAAGCCGCGGAACTGGCG 3260 29 100.0 32 ............................. GCTTGGACTTCGGCGAGGTCGACGTGGTCGTC 3199 29 96.6 32 ............................A CCAGCCCGTCCGCGACCAGGGCCTTGACCGCC 3138 29 100.0 32 ............................. GATCAGCACAGGCCCACGCAGGGGCCTCCAGA 3077 29 100.0 32 ............................. TAGGACCGGCCAGCCGACGACGAGCACCAGGA 3016 29 100.0 32 ............................. TCGCGGCCCTCGTCCTCGCACTTCTTCGCGAT 2955 29 100.0 32 ............................. GAGCAGCGACTCGCAGCCGTTCCCGTCGAGAG 2894 29 100.0 32 ............................. ACCGGGATCGATCTCAGCACGTTCACGGTGCT 2833 29 100.0 32 ............................. TGGCCTCGGTGACCCGGAAGTTCCGGCGCCGC 2772 29 100.0 32 ............................. AGGTTCAGAGAGAATGGGCCCGTGCCCGAAGA 2711 29 100.0 32 ............................. CGGGTCGTCGACCTCCTGGCCGCGTACATCGA 2650 29 100.0 32 ............................. TTGGCGACCAGCGTCCCATTGATGCCGTTGCG 2589 29 100.0 32 ............................. GACACCAAGCGCCTTTACCAGTACCAGGGTTC 2528 29 100.0 32 ............................. ACGAGCTCGTCGGGCCGGAGGCCGTCGCTGAC 2467 29 100.0 32 ............................. TCGCCCAGCCGCGTCATGGCGCTGATCGGGCG 2406 29 100.0 32 ............................. TAGACGAACTCCAGCTGCCAGTTGGTCGATGC 2345 29 100.0 32 ............................. AACCTGTTCCGCGGCTGAGGGCCGATCAGCCG 2284 29 100.0 32 ............................. GTGATGAGGTTCTCCCCGGGCTCCAGGCCCCA 2223 29 100.0 32 ............................. GAACTGGCCCAGTCGGAGCGCATCCGGGAGAA 2162 29 96.6 32 ..T.......................... GCGCGGCGGCCCGGGTCGGTGTCGTCGCAGAT 2101 29 100.0 32 ............................. GTGCTCATGCGCGCGTCCCCGATCCGGCCTGC 2040 29 100.0 32 ............................. AGGGTGGCCTCGAAGGCGAGGAGGGCCAGGGC 1979 29 100.0 32 ............................. CACGTCGCGATCACCACCATGATGTGGATCAC 1918 29 100.0 32 ............................. TCGCCGCCGCGCGGGACGACCGGCCCGGCCGG 1857 29 100.0 32 ............................. CGTTCCTGGTTGAGCTCGGAGTCCATCAGGTT 1796 29 100.0 33 ............................. ATGCCCATGGTGAACCTCCACTATCCGGGGGGG 1734 29 100.0 32 ............................. TCGAGCCGTACGGGCGGGAAGTGGCCCGCTTC 1673 29 100.0 32 ............................. CGGCCCATGGTGAACCTCCACTATCCGGGGGG 1612 29 100.0 32 ............................. TCGAGCCGTACGGGCGGGAAGTGGCCCGCTTC 1551 29 100.0 32 ............................. CGGCCCATCAGGGCGACGGCACCGCACGTGCT 1490 29 100.0 32 ............................. ATGCCCATGCCGCCCACGAAGCGGGTCACGCG 1429 29 100.0 32 ............................. CCTTCACGGCTGTCCATGCGCTTGACCATCGC 1368 29 100.0 32 ............................. CCCCATACGAGACCGGATGTGACGCCGAGGCC 1307 29 96.6 32 ................T............ GTGCTGTCCCGGCTCCAGGAGCGGGACGTGCT 1246 29 100.0 32 ............................. CAGCTCCGCGAGTGCCGCGTCACCGGCTGGTC 1185 29 96.6 0 .......................A..... | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.7 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GGCACTGACGTACGTCGGATCATCACGAACCGGCCCGTAGAGCAAGGGAACCTGCGCCTGAAAAGGGGGAGAAATCTTGCCGATGTCATGCAAACCCGCCCAGAACGAAACCACAGAGCGGGTCTCAGACAGGCCCAAACCAAGCGCACCAGCAACAGCCAACTTCGTACCGTCGCCCACTACCTCATCCCACAACTCCTGGAACGCAGCACTGGTATCCAGTAGATGGCACACCACCGGATACGGACGCGACAGCCCGTTCTCCTTTCCCCATAACCGCACATCCAAGAAACAGCGTCCCGACACCCCAGCCTCGCCACCCTTCAGCATGCCCACAGAGGTAGCACCCCCCACTGACAACGACCCCGAATCGCCGAAGATGGCACCGAAAGGCGAGCGCGCATTTACACTCGCTGCGCGACGGCGACGAAACGGGAACCATGATCGACAACGGTCAGCAAGAGATGGCAAAGCCACTCAGTAAGCGCAGGTCGCGAAGG # Right flank : GAGAAGCTGGTCGCCGGGGCTCCCCACGGGTTGTGGGCCGCCGTGCCGTACACAGCAGCCCAGGGCGTTGGTTCGGCAGATAGCACACGCCGTCGACCGCGGGGCGTCACTGCCTGGGTGAACAGGGGGACGTGAAATTGAGACCATCATCCAGATCGTCAATCCGTCGCTGCTCGACGACCTCCGCAAGCAGCGCAAAACCGGGAGCCCTTCATGACCGACGCCTTGGTGGCCTTCCTCCGGGAGCGGCTCGACGAGCAGCTGGAGAAGGCACGCTTCGCCAGCAGCACGGTGGCTAAGGCCCCCGAGCGGTTCGGTGTAGATCCCGAGCAGGCCACGGCGCATGCCCGGTTCTCCGTCGCCACCGCCGAGGTACACCTCGCACTCCTGGAGGACACCGTCATCCCGCACCTGGGAGCAGGTGGGGCAGCCGACCGGACTGCTGAGTACCAGCTGCGGCTCCTGGCCGCTCCCTACGTCGAGCACAAGGACTACCCGCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 13287-17825 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENSA010000102.1 Streptomyces sp. MBT61 scaffold102_size20381_cov85.1093, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13287 29 100.0 32 ............................. CCTGATGGACATCTAGGCACCCATAGGCAATG 13348 29 100.0 32 ............................. GGGTCACGTCAAGGCATTCGCGCAGGTCACAT 13409 29 100.0 32 ............................. CTCGCCGAGAACGCCCGCGGGGCACCCCCGGA 13470 29 100.0 32 ............................. TCTCACCAGGGCGTCCTGCGGGCCCTTCCGCG 13531 29 100.0 32 ............................. CCCGCGTCCCTTTTACTGTCTGTAGTCGTGCC 13592 29 100.0 32 ............................. CTCTTCGGGTCGGACAGCCACATGATCACGTC 13653 29 100.0 32 ............................. GCCTTGAGTGACGGGTTCCAGTCCGGGGTCGG 13714 29 100.0 32 ............................. TCCAACGGCGGCGGTGACGTCCTGACCGTCGA 13775 29 100.0 32 ............................. GTCAACGACCAGGTGAAGGTCTACCACCCGAC 13836 29 100.0 32 ............................. GTCCCGTGCTTAGTACGTGACGACACGTCTGA 13897 29 100.0 32 ............................. CTGGCCGCGAAGATGAAGACGGCGACGAAGGC 13958 29 96.6 32 A............................ CAGCGCCTTCTGGATCTGCTCGGGCGTGGCGT 14019 29 100.0 32 ............................. ATCGTGGTGCTCACGACGCGCTCACCTCCGTG 14080 29 100.0 32 ............................. TACCTGTCGGTCTCGGCCGCGGACACCCTCGG 14141 29 100.0 32 ............................. CCCACGGTGCCCGCGCCGACCGAGTCATTTCT 14202 29 100.0 32 ............................. GCGTCGTCGTCGCCGTCGTTGTCGACGGTCAC 14263 29 100.0 32 ............................. TCCGTCCAGGGCTACAACCTTGAACACCGCGT 14324 29 100.0 32 ............................. TCGTCGAGGTGGATCGCGCGCAGGGGCCGGTG 14385 29 100.0 32 ............................. TCTGCCGCCCAACGAGGGAACCACCCCGCTCA 14446 29 100.0 32 ............................. GCGAACCCGGCGTTGGGGTACCGGCTGACGCT 14507 29 100.0 32 ............................. TGCATGAGGGCTCGGGCGTTCGTAGTGGCGTA 14568 29 100.0 32 ............................. TACGAGCAGCTGCTCGCCGACTACGAGCGGAT 14629 29 100.0 32 ............................. ACCACCGAGTACCTCGAAGACATGGCGGCCAT 14690 29 100.0 32 ............................. AGGCACCGCACCACCTGCTCGCCCGGCAGGAG 14751 29 100.0 32 ............................. CCTGCCCCGGCCCCGGATCTCCGCTGCATCGC 14812 29 100.0 32 ............................. CGGCCGGGCACACCGTGGTCCGCTGCGACGTC 14873 29 100.0 32 ............................. TGAAACGGCGACATCGCCGGGTACGTGGCGAC 14934 29 100.0 32 ............................. CCGCGCGGCTCCGGACCCTCGTCGGGCACCTC 14995 29 100.0 32 ............................. AAGCAGACCGACGTACGGGGCGAGAGCCAGGA 15056 29 100.0 32 ............................. TCGACGACCGGCTTCGCCTGACCGCCCCCGGC 15117 29 100.0 32 ............................. CAGCCCAGCATGCGGTCGATGCTGGCGGAGGA 15178 29 100.0 32 ............................. GGGCAAGTGCCGCCGCCGCTGGAACCGGTGGA 15239 29 100.0 32 ............................. CGGGTCAACACCGTCCTGGACAACACCCTCAT 15300 29 100.0 32 ............................. AGATGTGGACGGCCCAGCCCGGCGCCCCCGTC 15361 29 100.0 32 ............................. TGCAGGCGCAGGTCGCCGCCGGAGACCGGGCC 15422 29 100.0 32 ............................. GGCCACCCATCAGGGCGCGGTCATGACCGGGT 15483 29 100.0 32 ............................. CTTGTGCAGCAGCTCACCGAGGAGGACGTGAT 15544 29 100.0 32 ............................. AGGGTGAACCCTGTTGCGCTGACGTTGATGGG 15605 29 100.0 32 ............................. AAGCTGATGTCCGTAGAGCGGGAGGACCTGGA 15666 29 100.0 32 ............................. CGGCAGCACACGGTCTCGGTGCGGCTGTCCGA 15727 29 100.0 32 ............................. CTGTGGAGGACCGAGGCGTGTTCTTCTACCCG 15788 29 100.0 32 ............................. ATCCCGCCCGTGCCGTTCCACCCCGAGGCGAA 15849 29 100.0 32 ............................. CTGCCGGAGACGGCCATCAGACCCCGCCGATC 15910 29 100.0 32 ............................. GCGGCCTGCCGCAAGCGATGGCCCAAGCCGCC 15971 29 100.0 32 ............................. TCGATGTCATCCCGAACACCCAGGGCATCTAC 16032 29 100.0 32 ............................. CCGGACGCGCCGCCGATCAGCTCGACCCTCCT 16093 29 100.0 32 ............................. GCCGCCGCGATGACCCCGAGATCCGGGGCGTG 16154 29 100.0 32 ............................. CCGGAGGGGATGCCGGTCTGCTTGCCGTCGCG 16215 29 100.0 32 ............................. TGGCGGACGGTCCCCCCGACGCGCAACACGGG 16276 29 100.0 32 ............................. GTGTCGTTGGCCCGGACCGATTCGACGATCAC 16337 29 100.0 32 ............................. CTGTGCGCGTTCTGCGGCGGGCCCATCCAGCA 16398 29 100.0 32 ............................. CCGCGGTGCCCACTCCGCCGGCCACGGTGTCG 16459 29 100.0 32 ............................. GACAACCGGTGGGCGGACGTTCTCGACCTGAT 16520 29 100.0 32 ............................. CGAACGCGGGCTTTAGTAGTAAGGGAAAATCT 16581 29 96.6 32 ............................C TGCCTCCCCCGCCGGGCGTCCGGCGCCCGACC 16642 29 100.0 32 ............................. CTTCATCGACATGCTCCAGCCCATCGTCGACA 16703 29 100.0 32 ............................. AACCTTTAAAACCCCAGGTCAGAGCCGGTTTC 16764 29 100.0 32 ............................. CCGGACGTCGAGCTCACCGTCGCTGGGTGGGG 16825 29 100.0 32 ............................. CTGACGTGCACCGGGTACGTGCCCGACGCGGT 16886 29 96.6 32 ............................A AGCCCCCGGGGCCGTGGGGCCGCTGCGGGGGC 16947 29 100.0 32 ............................. ACGCCGACGGCGACCAGTCCGGCGCGGCCGAC 17008 29 100.0 32 ............................. TTCCCGGACGCGCAGGGACTGGCCGTCCAGAA 17069 29 100.0 32 ............................. CACCGAACGCAACCGGGGACTTCAGTTCGATG 17130 29 100.0 32 ............................. CCACGGCCAACGCCTTGCCCCTGATCCACTTC 17191 29 100.0 32 ............................. GACGATTCGAGATCAGCCGTATCAACGCAACC 17252 29 100.0 32 ............................. ACGGTGGACGCGCTCGCGGCCGCCCAGAAGAA 17313 29 100.0 32 ............................. GAGGGCAGCGATGCCGAAGACGACTGAGCGCC 17374 29 100.0 32 ............................. TCGGGCGCATCACCATCCCGTCCCGGAACGAC 17435 29 100.0 30 ............................. AAGCTCGGGACCCGCGTTCGGGCGGGCCGT 17494 29 100.0 32 ............................. GCGGACGTCCGGATCACCAACGCGGAGCAGGC 17555 29 100.0 32 ............................. CAAACGGAAGATCGACCTTGCTGTGTGCGCAA 17616 29 96.6 32 ...............C............. GGTGCGGCGACTACGACCCGGAAACCGGCCTC 17677 29 100.0 32 ............................. ATGCCGTCAAGGATGAGGTGGCCAACGCGGCG 17738 29 96.6 31 ...........................T. ATCTGCGGGCAGAGGGTCACGTCGTGACGTA 17798 28 75.9 0 .........A...CT....G.A..-...C | ========== ====== ====== ====== ============================= ================================ ================== 75 29 99.5 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CCCACGCATCGTCACCGACATTCAGCAACTCCTCGATCCCGACCACACCTACGAAGCCCCCGACTCGGCGGAGCAGATGGTCGACCTCTGGGACCCCGTGGTCGGCTCCGTACCCGCCGGCGTCAATCACGGACTCCAGCCGTGACCCGCCCCACGGAAGAACATCGGCCATGTCCTCGATGATCGTCATTTCAGCCACTGCCGTACCCGACCACCTCCGAGGAGCCCTCACCAGGTGGCTTCTCGAAGTCACACCCGAGCTCTACGTCGGCACCGTCTCCGCCAAAGTCCGCGACGAACTCTGGACAGCCGTCACCGCCTGCACCGACGACGGCCTCGCAGTCCTCGCACACCCCGCCGACAACGAACAAGGCTTCCAACTTCATACAGCAGGAAAGCGCCGCCGTGAGCCCATCGACTTCGACGGGCTCACCCTGATCGCCTTTCAACGAGAAGGTCAAGAAACGGCAAAGCCACTCTAACGGCCCAGGTCGCGAAGG # Right flank : CCGCCCGAGATCACGCCTGAGGGCTGTTCTGTAGTCCTGGTGGATCAGCGTGCGCGTCAGATGCGGTGCATCGTAAGGCCGTAGGGGCGTTCGCGTACTGGATGATCCCGGGCGCGGAGAACGCGGTGAGGTGCCTGAGCTGTCGTGGTGCGCCCGCCAGGGGTTACGGGGCAGTCCGAAGGGCTTCGAGCAGGCGCTCGTACGCCCGCTTCGGCCGCAGGTCCGTGTCCCATGGCAGGGAATCGGCGGGGCGTGGGGGGTAGATCTTGGTGTCGGCGGTGGAGCCGTACCGGTCGGTGAATCCCCAGGTGGAGAATGATGTGCAGTTCGGCTCCTCCAGACAGACTTGCAGCTTGCCTGCCATCTCGTCAGCCTGGGCCTCTCGGCCGCCCTTCTCGTCCTCAGCTATGGGGACGTCCATCTCCGATACCCGCGCCTGGATCCCGAGTTCCGCCAGATCCTGGACATGGCTGCGGAAGGTCTCCGGGGCGGTGCGGTCG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 50953-50026 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENSA010000004.1 Streptomyces sp. MBT61 scaffold4_size52868_cov81.9206, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================================================================== ================== 50952 29 100.0 32 ............................. ATGGGCTTTCGCGTGGCCACCCGCCCGGACGG 50891 29 100.0 32 ............................. TATTGCCGCATGGCCGCCAGGCACGGATCCCC 50830 29 93.1 84 ..........T.................T TAAGGCGGCTGGTGCGCGGCTGCGCGTGCCGGGGTGCTCTGGAGGTGAGCCCGTACCGTTCGGCCTCCAGGCGGGCCCCTGGGA 50717 29 89.7 32 ...T....T.T.................. GGCCTCGACGTGTACCCGGTCTGTGTCGCGTC 50656 28 96.6 32 ...............-............. GCGTCGACCGCGCGCATGCCGAAGGCGAAGGC 50596 29 96.6 32 .............A............... TCGACGACCAGGTGGGCCAGGAGGTCGACGAC 50535 27 93.1 32 ............--............... GAGGTCAAGGGCGCGGGCGGCCACGGGGCCGT 50476 29 100.0 32 ............................. CTCACATGCGATTCGGCAGGGGCCGAGGTGTG 50415 29 100.0 32 ............................. ATCCTCATGGTCCTGGCCGTGGGAAGCGTGCT 50354 29 100.0 32 ............................. GTGTCCTGGTCCGCGGCGTCGTCCTTGCAGAC 50293 29 86.2 32 ...T.T........C..T........... GCCGAGTACGAGATCCGCGGCTTCGTCCGGGC 50232 29 100.0 31 ............................. CAGGTCGTTCGGCGGCCGACAAGGTCGCTGG 50172 27 86.2 32 A...........--.........A..... CCGGTGCGGGCGTAGACCAGCGCGTTGCGCAG 50113 29 96.6 31 .....................A....... ACCCGCAAGGGCGAGACGATCAAAGCCAAGC 50053 28 86.2 0 C......G...............A.-... | ========== ====== ====== ====== ============================= ==================================================================================== ================== 15 29 95.0 36 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGAGGAACTCGAGGACGCAGCCGTCGGCCTCGCGCCCCCACCGCCGCCTCCGCTGGAGCACCCCGACACCAACACCACCGGGGCCAGCCCCGCTGTCACGGCTCCATCGTCCTCATGCGCCGCAGGATCCCAGCCCCACCGGGCAGGGGAAGGAATACCCCCGCATCGGGGATCCTCAGTAACAGGTGCGGGGCCTAACGATGACCAACCACACAGCGGGAGCGCCACCGCCATGGCCCAAGACCACCTCGTCGAAGCCGGAACCGCCGCCCGCCGCGCCGAACCCCTTGCACTCCGTCGGCAAGACGTCCGGTACGACGACCCCCGCATCATGCGCCTCGGCTACGCCACCGCCGGTGCCGCCTGCAAGGACCTGACCGCGCCCTCCAGCATCACCACGACGAAGAAGCCGCCGAGACTAAGGTCTACCGGCAGCAAAAGAACGAGCGCCTCGACGCTCTCCTCGAAGCCATCTGGGACAAAGCCACCGCCCCAGCCCC # Right flank : CCTACTGGTTTGTGAATCAGGCGCCTGGCGGGCTGTCGGCTCGTCGCGGTATCCGGCTTCGCGAGCGTGGTGCCGGGCGATGTGTGCGAGGTCTACGCGGGACAGCTTCGGGGCCATGCCTTGCTGGCGGGGGTGTTTGTCTCGGTCATGTCCCGCCTCCTACCTGCTTCCGTAGGTCATCAGCGAGCTGCGGGCCCCGTGGGCGAGCTGGAGGCCGCGGCGGACGAGGGCCGGGCCGTAGAGCTGTTCGGCTGTCTCGCGGCCCAGGGTGTCGACGGCGACGGTGATCGGTGAGGTGTCGGCCATCATCAGCCGCTGGCGGGCGTCGTTGCGGGTCTCCGCGATCTCGGAGTCGCTCAGGCTTTCGTCGACGGTGGAGTGGACTAGGAGTAGCCGATCACCGGCGAGGCGGGCAGGCCCATGACCGGACCGATGCGGGCCGGTCCGAGCTTGCGGTCCCGACTCAGCGCCAGACCTGCGCCTCGACTTCGGCGGATGTG # Questionable array : NO Score: 5.36 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.27, 8:1, 9:0.63, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [35.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //