Array 1 305796-304367 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXEO010000006.1 Bifidobacterium pseudocatenulatum strain YIT12817 YIT12817_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 305795 33 100.0 33 ................................. AAGACCACTGACAGCAAGTATCTGACAGGTGTG 305729 33 100.0 32 ................................. CTGATTCTCACGCGGCCACCCCCAACCCGATG 305664 33 100.0 34 ................................. CGATAGGTTTGCACCGCGAAGGTCGGCACCGCGC 305597 33 100.0 34 ................................. ATTTCAGGCTTTGACGAGATACCAGGTTGACTTG 305530 33 100.0 33 ................................. AAATATCCGCCAGATGGGTGCCGCAGCCGCCGA 305464 33 100.0 33 ................................. CGTGACTGTCACGGTGAGCGACGGCGTGAGAAG 305398 33 100.0 33 ................................. CGTGACTGTCACGGTGAGCGACGGCGTGAGAAG 305332 33 100.0 32 ................................. GGGTAATCCGAACGTCATCTACGCTGGCGAGA 305267 33 100.0 32 ................................. TTGTTGACGTGTCCGCTCCAAAGATTCATGGC 305202 33 100.0 33 ................................. AGACCCGTGACGACGTAATCGCCTTTGCCAGCC 305136 33 100.0 33 ................................. CTGCTGGAGTGTCGAATACTGCCGCTGGCGGCG 305070 33 100.0 35 ................................. TCCCATTTGAAGGCGAGGTTTGCCATGCCTGGCGT 305002 33 100.0 34 ................................. ATCGACCCGCTCACCGAAAAAGGGTGGACGGCGT 304935 33 100.0 36 ................................. AAGGTGGAGCGTCGATACTATGTTTAATCGTGGTAA 304866 33 100.0 32 ................................. TTTGCCGACATTGGAACATGCCGCGTCACTGT 304801 33 100.0 35 ................................. CTTTGGTTGACGGTTTCAATGAACTGGCTAAGGAA 304733 33 100.0 35 ................................. CATGCGTACCATTGATACGACGCTCGAAACGCACC 304665 33 100.0 34 ................................. TACACGGACGGCAGGATGCATGTCTCCTTGGACG 304598 33 100.0 34 ................................. TACACGGACGGCAGGATGCATGTCTCCTTGGACG 304531 33 100.0 32 ................................. TTCGTCGACAACGTGCGTGGATACGTGCACAG 304466 33 100.0 34 ................................. TTTTAGACCGTTTGGTCAAGCGAAGCGTGACCGG 304399 33 81.8 0 .......T..T..C..A...C...........C | ========== ====== ====== ====== ================================= ==================================== ================== 22 33 99.2 34 GTCGCTCCCCGCAAGGGGAGTGTGGATTGAAAT # Left flank : GGCGTCTACGTTTAGTGGCAAAAAGCTGCATGAAATATGGGCAACGCGTGCAAAATAGCGTTTTCGAATGTAGCGTTACTTCTGCGGAGTATCTTACGCTTAAGCATGATCTGTTGAGCATCATCGATGTCAAAACGGATAGTTTGAGATATTACAATTTGGGAACGAACTATTCACGGCGCATTGAACACTTAGGTGTTCAACGTCATGTTCCCGTTGATGGAGTCATGATGGTATGACTTCTAAACGACATGCAGTGCGACCCTGAAGCAGTCATGAGTTACAGGTAGGTTCGCACCTTTTTTGTGCGGAGGAAATTAAAACTGGAACTCTGATGTAATTTCGGATTGTTGTTTGATAATCGAAAAGTGTAGTCAGATAGAGTTTGATCTTTGCATTTGGACGTATTTGGGTCGGCGGGGAACTGATGTAATATGTGTATCAGCCGAGATGAGGTTTTGCTTGAATTATTATTTGGTCAAAAATGTCTCATTTCTGCG # Right flank : GACGTTGACCATTGGGTTATATTCCATGCTATGCCGGCCACGGCTAAGTTTTTGCGTGAAGTTACCGAGTGGGAGGTGTGTTGTGATTAGTGATGCCGAGTTTGACCGTTGGGGCGAAGCCGCCGAACGTGGCGATTACGGTGGAAGTAGGGGACCTGTGATGCATGGTCCTATTTTCCAGTGGACGCCGATTATCCCGATATTGTCTCGTTGGGTGTTTCCGCGGACATGTTGGCGTTGGTTGACGCGAAAGCTAGGCGGTTGGGTGTTGGGCGTGATGACGTGATACGCCATGCGATAGCGCGCGATCTCGTTGACGCTTGAACATTGTCCCGGTTGCTTTTGCGGCCGGGATTTTGTTTATTCGAACTTGTTTGGCGGGGTTCCGCCTGATGAAAATACCCCAAGAGTGTTGCCGTACTCTTGGGGTATTTACTTAAAGCAATATGCTTTATAAGCCTTCTCGTTCTAACGAGGGGGCGTTCACCGTCATGCTGCCG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCAAGGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.30,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //