Array 1 166056-166389 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGTIS010000010.1 Pseudomonas sp. DB1 AS-pseudo_contig10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 166056 29 100.0 32 ............................. CCTTTCCCATCAGCGGTGGGAAAGTCGAAAAA 166117 29 93.1 32 .G..........................A GACTTCTGGACCGGGAAGCTGCCGCCGCGCCC 166178 29 93.1 32 .T.........C................. GTCTTCAGGTCGCCGGTGTCGCCCTTGGTGAT 166239 29 89.7 32 .T............CA............. ACGATGTACATCTCGCCGCGGTGCGCCGGAGC 166300 29 82.8 32 .T.C.....A....A.......C...... TGGGGCGAGGCCGACCGCGTGCTCCACATCGC 166361 29 89.7 0 .T.........T....T............ | ========== ====== ====== ====== ============================= ================================ ================== 6 29 91.4 32 GCGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : GCCCAGATCGAACGGCAGCGTCGCCGCCTCGCGAATACTCTTGGTCTTCAGCTCGACCAGTAGGCGCTGCCGGCGCGTCGCATGGCCTCGGCGGCGTCCTGCGCCAGCTCCGGCTGCAGCCGGCGGCTTTGCTCGTCGCGGCGTCATCCGGTGCGCGCCACTGCGCGGTGAAGGGCGTTCCGCCTTGCCCCATCTGCCCGCGACTGAGTGACGAGCCTCATTCAAGGTGCCACCACAATTTCGGGGTCTTTGGTAATAAAAAAGCCGGCTTGTGGCCGGCTTATTGTGCTTATATCTATATGATTAGTAAGGAATATTTATTGCTTTTAAGATGCGTACCCTCATTTGTCCCCACACTTTTCGTGCGCGTGACCGTTTAATGAGGAGGAATTCGTCTGGTTTGGCCGGGGCGGCGACTGTGGCAATGCGATGCTGCAGTTGCCGCGCGGTGACACACATATTCCTGTCCATGGCGAATGCCCCTTACCGGTGATCCCAGC # Right flank : GGAGGAAGTCTATCAGCGTGGAGTCCGCACTCTCCTTGAGCGAAGCCCCTACTTGCTGGCTAGGCTTCCCAAGAACTTACTCAAGGACGCAGTGGCAAGCCATGATGCTCCAACAAGACCTATTCGAGTCCGAGGCTGCCCGCTCACTGCTGGATCAGCTGCTCGACGATGCACGCCTCTATCACAGCAGTACCGGCTACCGGGAACTGCTCGACTTCGTTGTGAAGCTCAGGAACTTCGCGCCTTTCAACGCCATGCTGCTGCATATCCAGAAGCCTGGGCTGAGCTATGCCGCATCGGCATTCGACTGGCGCGAGCGCTTCAACCGGCGTCCAAAGCGGGATGCGCGCCCCTTGCTCATCCTGTGGCCATTCGGGCCGGTGGCTTTTGTCTATGACGTGCAGGATACAGAGGGCGATGACTTGCCTAAGGACGTCAGCTTCTTCCAGGCCAGTGGGGAGATCACCGAGGAGCGCATGAAGCGCTTCCTGGTGCTGATG # Questionable array : NO Score: 3.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //