Array 1 1019758-1022569 **** Predicted by CRISPRDetect 2.4 *** >NZ_LIRF01000003.1 Chryseobacterium sp. ERMR1:04 contig03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1019758 46 87.2 30 AA.-.C....A......G............................. AAATCATTCCTACATTTTTTTATTAAAATT ACC [1019765] 1019837 46 91.5 28 A....A.....A....-.............................. TTTAAAAACTTATAACAGTGCATGCATC 1019911 47 97.9 24 ................................A.............. ATAATACCATAATAACCATAACCA 1019982 47 100.0 30 ............................................... CGATCACACTCACCCATATTCTCAGGGATA 1020059 47 100.0 30 ............................................... AAAATGGGACGTAATGTAAATATTATGTCA 1020136 47 100.0 30 ............................................... ATATGCTTCATAAAGCATCAATTTCGGATA 1020213 47 100.0 30 ............................................... AAAGGCTGCTATGACCTATGGATTTGAGTT 1020290 47 100.0 30 ............................................... CGTTGGATGTGCATGAGAATCGCAAGGACG 1020367 47 100.0 30 ............................................... ACCACTCCCTTAATACTTGCATTAGTTACC 1020444 47 100.0 30 ............................................... ATTTCAAATCTAAAAGAACCTATTATGATT 1020521 47 100.0 30 ............................................... GATTCTTAAAGTCTTGAATCCCAAAATTAA 1020598 47 100.0 30 ............................................... GGATTTAAAACATTCAACCAAGTGTTAGGT 1020675 47 100.0 30 ............................................... TAAAATCGTTCACAACATCAAAAGAATACT 1020752 47 100.0 30 ............................................... GTTAATGAATTAATATCATACATAAGATGC 1020829 47 100.0 30 ............................................... CTTTAGTAAAAGTATAACTTTTTTCGGCTC 1020906 47 100.0 30 ............................................... AAAGAAGGGCAAAAGGAATTAAGTGGGTGT 1020983 47 100.0 30 ............................................... TTATCCTATTTACGAAAATAATGCTATTGT 1021060 47 100.0 30 ............................................... GATTTGCATCAATATAAAGAAGCCGAATCC 1021137 47 100.0 30 ............................................... AGATTTGATGTGGAAGATGTAATACATATA 1021214 47 100.0 30 ............................................... CGGGAACTGTTACGGTAGACAGAGAGATGT 1021291 47 100.0 30 ............................................... AACAATGGAATTATATGAGATTCCGGCCAC 1021368 47 100.0 30 ............................................... TCATGATTTAAAATTAATCTGCAAAGGCTC 1021445 47 100.0 30 ............................................... AAGAAGTCATGATGATGATTTTATTGAAGT 1021522 47 100.0 30 ............................................... AAACCACAAGTAAACCATATTAACGGGACT 1021599 47 100.0 30 ............................................... AAGAGCTTAAAGATCTTAGTCGCCTACAGG 1021676 47 100.0 30 ............................................... GGGCGAACCTTCGACGACCAAATCGCGACC 1021753 47 100.0 30 ............................................... GCTGCGTTATTCTTAGAAATGAGTTTAAGT 1021830 47 100.0 30 ............................................... CACCTAAGCAAAAGCTAAAGGCCCTTAACG 1021907 47 100.0 30 ............................................... AAGGAACGCAACGTGTTGATAAAATAGCCA 1021984 47 100.0 30 ............................................... TACAAACAAGATGTGTATTATCGGGATTCC 1022061 47 100.0 30 ............................................... GGAAAGATTCTCCGGCAATGCTGTGATCTG 1022138 47 100.0 30 ............................................... TGTTTTATCATTTTATAGAATATTTATTAG 1022215 47 100.0 30 ............................................... TTGGGATTAGAAACGTGCAATCGTATTTTG 1022292 47 100.0 30 ............................................... CCATTGTTAGTTTTTGCCAAAGTAGTTTCG 1022369 47 100.0 30 ............................................... ACGGTGTTTGGAATGGTAATATGGTATCAA 1022446 47 100.0 30 ............................................... AAAAACTTTTGATGAAACCTTGCTTGATCA 1022523 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 37 47 99.4 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAATCACAGC # Left flank : ACAACCTGGAATTACAGCGCCTATAGCAAGCGCTACAAATATTGATCAATTGGCTGATTTAATTAAGGCGACTACCATTACATTAGATCAAGAGGATATTGCGTTATTGGCAACAGCAAGTAACATATAATGCTTTAATAGATGACAGAGCTATGTTCTGAAGTGCCCCAATTAAATTTTGGGGTACTTTTTAGTAAGCAGAAATATTTTCGGATTTTTTCATATAAATAAGTTTAAATAGGTTGTATATTTAGATCAAAAGAAAAATTAATGTAGATAAATACGCTACACAACATTACTATTTCTCTTTTATTGGTAGGAGCCGCCTCTTTATTTGTTTTGTAATTCACAATATATCCTTTTTATCTTTCAGAAAAATCCAGCCATTCCAATACTCTGCAATGCAGCTCTTCTTTCTGCAGATTAGGTTCAAGGTTATGTCCTTTCTCGGTATAGAATAAAGCAATAACCTCTTTTTATTTCTTCTCAGACCACTATAA # Right flank : CCTCAAAAAATAACCTACTGATATTTAGTAGGTTATTTCTATATTTAGAATTAAAAATTTAGAATAATTCCAACTGTTGAAAGGTTGGAGGTGGCTCTTCTTTATTTCTGGCAAAGAATATTTGAATATCACCAAATTGTTTGTCTGTGATACTCATAATGGCAACTTTTCCGGCTTTAGGAAGCATAAACTTGACCCTTTTAATATGAACTTCAGCATTTTCTCGGCTTGGGCAGTGGCGTACATACATTGAAAACTGAAACAATGTAAATCCATCATCAATCAAAGCTTTCCGAAAACGATTAGCATCCTTCATATTTGCTTTAGTTTCAGTTGGTAAGTCATATAATACTAAAACCCACATAATTCGGTAAGCGTTAAACCTTTCGGTATTCATATTAGTTTAGGATAAGAGATCAATCGTTTTTCTCCTGTATAACATTTATAGAGCGATGATGCTGTTGTTTTAACAGCAACTAACAATGGTCTTGTTTTACTAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAATCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //