Array 1 61446-58789 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDBY01000057.1 Aeromonas simiae strain CIP 107798, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 61445 29 100.0 32 ............................. CCTGAGCAAGCCGCCCCTTCTTCTTATGTCGC 61384 29 100.0 32 ............................. TGGTGGTAGTCAGGATGGCCGATGATGAGGTC 61323 29 100.0 32 ............................. ATGTCAAATGCCTGGTCACCGAACTCGCCCGC 61262 29 100.0 32 ............................. GAGAGACGATGTTCTCGCAAATCAAAACCATA 61201 29 100.0 32 ............................. CGCCATGTCAGCAGGCCGACAGTATCGCCATC 61140 29 100.0 32 ............................. GTGGTGCCATCCGCATTATCGGCGCACTGCAA 61079 29 100.0 32 ............................. TCGTCGAGCAGATGATCGGGGGTTGATATGCC 61018 29 100.0 32 ............................. CTCAAACGCGGATCGTGCTGGACGATTACGTT 60957 29 100.0 32 ............................. ATATCGCCCCCCTGACCCGCCGGATACGTGAA 60896 29 100.0 32 ............................. CACCGGCAGTCGCTGGGCATGGTGTGGAACTG 60835 29 100.0 32 ............................. AATCAACATTTCATCCAGCAACTATCATCGAG 60774 29 100.0 32 ............................. CCTGATAACCCAACACGGAAAGATCATCATTA 60713 29 100.0 33 ............................. TATGCGTCTATCAAATAAAACGCTACTTCTGAC 60651 29 100.0 32 ............................. AAATTGATCACGGTCGCTATCATAGCCTTCGG 60590 29 100.0 32 ............................. TAGAGGCGGCGGATACCGCCCAGTGCGATCAG 60529 29 100.0 32 ............................. CGGGTTCTGTGGGACGAGAGTGAGGATCGTTA 60468 29 100.0 32 ............................. TGGGCTGGCACAAGACCCTATCCAACGTCGCC 60407 29 100.0 32 ............................. CAATAACACTTTTAGTGTCGGAGTTGCCGCCA 60346 29 100.0 32 ............................. TTCGTGGTGTACCGAGTGGTGTACCGATAGCG 60285 29 100.0 33 ............................. ATCGTGATCTGTATATGGGTTCTATCATCAGTC 60223 29 100.0 32 ............................. AGCTGATGATGCGGGAGGCGAGTGCCAAAGTG 60162 29 100.0 32 ............................. TGTCTGACAACGGCAATCACGCAGAACTGCAC 60101 29 100.0 32 ............................. CGCGGGTTCGAGAGATCAGCAAGTAAGAGGAA 60040 29 100.0 32 ............................. GGACCGGCGGTGCTGGGGAACAAGTTGAATCC 59979 29 100.0 32 ............................. TTGCATTATGAGATGGTAGGCAACCTCTAATG 59918 29 100.0 32 ............................. GGGGTTTCCCCCTTGGAGCTCTGGCAATAACT 59857 29 100.0 32 ............................. TAAAACCCGCATTGCTCGCTACTGGGGAGACC 59796 29 100.0 32 ............................. TCCGAACAGGAGTTCCTCGCCTGGCTGGAGCA 59735 29 100.0 32 ............................. TCAAGGCGGAACGGCTCGGAGTTCGTTATTCG 59674 29 100.0 32 ............................. CCGCAGATCGACGAGGCAAATTGGGTACTGAC 59613 29 100.0 32 ............................. AACCTCGGTGTCTTTAATGCTCGACTTGGTGG 59552 29 100.0 32 ............................. GGCAGCTACTGCGACACAGTGATGATTAAGGC 59491 29 100.0 32 ............................. GCCGCGATGTTTGACGCCCTGCTGGAGCCTGC 59430 29 100.0 32 ............................. CTGTACTGTTAATGTGATCGGGTTTTCTTGAT 59369 29 100.0 32 ............................. GCCTGCTCATGGGCTGACGACAACTCAGCTTC 59308 29 100.0 32 ............................. AAGAAACGTGCCTGACTGCCAATCTGCCAGAT 59247 29 100.0 32 ............................. GTCTATCCGGAAATGGCGTCTGGTCTGCTCAA 59186 29 100.0 32 ............................. GATCTGGTGCGACCACTAAGGAAAAGCAGCGA 59125 29 100.0 32 ............................. CTGTCTGTGCGTCAGCCAGTTTCTGGGCATTC 59064 29 100.0 32 ............................. CCGGCAGCACCATTTCAGGGCTGACCGTAGAC 59003 29 100.0 33 ............................. CAGAACAAGGACACTCAGCTTGGCATGAATGCC 58941 29 100.0 32 ............................. GGCATTATTTCGGCTCGTTGCTGTTTTCTGGT 58880 29 100.0 32 ............................. GGTGCGACGGTGCTGGGGAACAAGCTCAATCC 58819 29 82.8 0 ...........A.TT..A......C.... | T,T [58791,58794] ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.6 32 CTGTTCCCCGCGTCCGCGGGGATGAACCG # Left flank : CCGCTTATCGAAGAGGTGCTCGCCGCCGGGGGCACCACCCCGCCCGAGCCCCCCAAGGATGCCCAACCGCCCGCTATTCCCGAGCCTGCCGGCATGGGGGACGCAGGCCACAGGAGCCTGGGATGAGCATGCTGGTCGTGGTCACTGAGGATGTGCCACCGCGCTTGCGTGGCCGGCTTGCCGTCTGGCTTCTTGAGGTGCGCGCCGGCGTCTATGTCGGGGAGGTGTCGCGCCGAGTGCGAGAGATGATCTGGCAGCAGTGTGAGGCCTTGGTGGAGCAGGGCAATATTGTGATGGCCTGGCCCGCCAACAACGACTCGGGTTTTGACTTTCAAACCCTGGGTGCCAATCGCAGGATGCCGGTGGATCTCGATGGCTGCCGATTGGTCTCTTTTCTACCCGTTGAAAATCAATAGGTTATCGTTCATTAACAATCTGGATTAGTCGGTGGCTTTTTTATTGTTGGAAAAAGCCATTGAAATCAATAATATCCGTTAAGA # Right flank : CAGTGCATAAGAAAAAGCCCAAGCAATTGAATTGCTTGGGCTTATCATTTGGCGGTGAGGGAGGGATTCGAACCCTCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTCGATTGTTGTTAACGTGGGCAAACTCCACGCTGCCGCGCTGTGCGTCGGAACGGGGCGTAATTTAGGGGAAAGGTGCGCGGTGGTCAACACTTTTTCCCCTTATTTTTCATGCTGTTTTTCATTTGCTCATGGGGTGAGCAGCGGTTGGCGTTTTTCTCGCCTCACGGCTGATCCAGTACCACCAGATCGTCGGAAAGTTCGTTGCGCTCATGGGTGGGGGGGAAGACATCCGCCAAGATCTCGCCGGTGCGCTGCACGCACTCGACGAAGCCCTCTTCCACCTTGCCGCGCCGCACCTGCTCGACAAAGTCGTCGATCAGCTCCTGCCAGACGTGATCTTCGATGTGTTGGGCCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGTCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGTTCCCCGCGTCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //