Array 1 69211-71178 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDCP01000031.1 Mycolicibacterium agri strain CCUG37673 N31L71835C31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 69211 37 100.0 38 ..................................... GTTCGCTTCTAGGCGTGCTTGGCATCGGCGGCGTTGAG 69286 37 100.0 36 ..................................... TCGCCATGGGTTTGCTCATGACGACCGAAGGCATAC 69359 37 100.0 34 ..................................... GGCGTGAACCGCTTGCCGGCATCGGCGGTCGTGA 69430 37 100.0 37 ..................................... GCGTTGCCGTCGGTGTACGCCTTCTGCTCAGCGGTAA 69504 37 100.0 38 ..................................... AACGGCTCCACGATCGGGTTCGGCTCTGCTGTGTTCTA 69579 37 100.0 40 ..................................... TTCCAGCGGCGGCGATGAGTCCGATGCCGGCTAGTGTGAA 69656 37 100.0 39 ..................................... TCTCCGACAGTCACCACAGACGGCCGCGCATCGGTGCCG 69732 37 100.0 38 ..................................... AGCCGGTGACGGGATTCCAGGTGTCATCCGTCCACTCG 69807 37 100.0 39 ..................................... ACCTCGTATCTGAGCAATGACATCTCCGACACCCTGGGC 69883 37 100.0 35 ..................................... TCGGCGGTCGGGATGGCGGGGGCACGGGTACATCC 69955 37 100.0 37 ..................................... GACGGAACTCCGCGAGCTCTGCCTGCCACTGTTCGAA 70029 37 100.0 38 ..................................... GTGGATTCGAGCCTTTGTGCCCATGACGCGGTCTTCCA 70104 37 100.0 35 ..................................... AGCAAGGCCGCCACCTGGTCGATGCGTGATGTTGT 70176 37 100.0 35 ..................................... GCGACGGCAGCGACCAGCGCGACCAGAGCGTTGCG 70248 37 100.0 38 ..................................... TGCGGCACACCGGGATGCCGCGCCACACCTTCGCGGGT 70323 37 100.0 37 ..................................... CCGCACCAACTGATTCGACAGTGACCGTCATCTAACT 70397 37 100.0 36 ..................................... GTTCACTAGCGCGACGGCGTGCGCTGTGTCCTATGT 70470 37 100.0 35 ..................................... CCTGTCGATACGGCAGCGGAGACCACTGGCCGCAC 70542 37 100.0 35 ..................................... CTGCAGCGGCTGCGTGAGCTGATCGACGGCGACCG 70614 37 100.0 40 ..................................... GCTCTGGAACATGCCTTGAACGGATCGCCACATCTCGGCA 70691 37 100.0 37 ..................................... TTCACGTCGTTCACGCAGCGCTGGGTTGCCGGTTGGC 70765 37 100.0 36 ..................................... GCGCGCACCATCACCGTGCCGTGTTTGAGTGAGTCG 70838 37 100.0 47 ..................................... CAGGAGACGGTGACTTCAACGCGTTCCCGGCCAGCTACTGGCGGCGT 70922 37 100.0 38 ..................................... CAGGAGACGGTGACCGCGCCGATACCGTTTGCGTTCCA 70997 37 100.0 35 ..................................... ATCGTGCACGCCCTGCCCGACCGCAGGGCGCTCAA 71069 37 100.0 36 ..................................... TCATCCGTCGAATACGGCGGCGTTACGTACTGGTAC 71142 37 97.3 0 ....................A................ | ========== ====== ====== ====== ===================================== =============================================== ================== 27 37 99.9 37 CCCGCCGCGGTCATTGCCGCGGCGCTTTCGTTGAGGC # Left flank : CGAGGCCTCCAGGTCGGCGAAGAACGGCAGACGCTCTTCGAGCGCGTGCACGGCCTGGGTGGCCAGCCGCCCCGAGTACTGGCTCAACCGGCGCAGCACCGACTCCGGCACCGACTCCAATACCTCCAGCGTGGAGGCCGGCGGGACAAACCGATTGTTCGGCATGCCTAAAAGTTACGCCATTGGCCTGTCGATTAGCTCCAAAGCTCTGTTATGGCCTCGATGCGTCTGTTGTCCTGGCATCGTTGAGTTGGGCTCGAACTCTCCTAAGTAGGTCGCTGAGTCAGCCGTGCAGGTGGGCGAAACAACCCCAGCCTTGTTCGCGGCGAGCGGTCCAGTAGCCGAGAACTTGCTGGCCACGTCTCGCAAGCCATAGCCGCAGGTCGATGCGGTCCCAGGGGGATTCAGACCACCCACGCCAGCGCGGATGTGACGTCTGGGAACAGCACTCGCCGAGCCTGGGTAACGCCGCAGATGAAAGTGATATTTTGGTGCAGGCT # Right flank : CGACGCGACCCCGTCGACTGACGTCGCCCTGATCGCCGTCCATGGCCTCGGCAAGCAGGAAACCGCGCAGCTGCTGCTGGACGATCTCGACCTGCCCGCCGGGCGGCTGCTCGTTCGGCGAGACACCCGCCACCACACCGTCTACCTCGATGAACTCACCCACACCCTGGCAAGCGCGTGGCTGCACGAACGTCGACGGCTGTGGGGCCGAACCACCAACCCGCACCTGCTCGTCAGCCAGGTCACCGCCGCCGATGCGACGCTCCCACCCGTCTCCCACCGAGTCATGGACACCATCTTCGAGCGGCTCGGGCTCACCCCGTCGCAGCTCCGCCGCGACCGCATCCTCGACGAGGCCGCCCATACCGCCGACCCGGTCCACCTCATGCACGTGTTCGGCATCAGCGCCAAGACCGCCATGACCTATGTCCAGGCCGCCCACCCAGAACGCCGCTCGACCGGACCTCGATAACACACGTAGTCCGGCACAATCCGCTGCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCGCCGCGGTCATTGCCGCGGCGCTTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.80,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //