Array 1 96978-97509 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JACHMG010000001.1 Amycolatopsis jiangsuensis strain DSM 45859 Ga0104640_01, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                              	Insertion/Deletion
==========	======	======	======	=============================	=============================================	==================
     96978	    29	 100.0	    32	.............................	TCGTTGGTTGGCATCAGTGGTGAAGGTTTCCA             	
     97039	    29	 100.0	    32	.............................	GTTGCGGAGCAAATGCGACCGGTGACGGCCGC             	
     97100	    29	 100.0	    32	.............................	TGCCTCGACCTCGGACCAATCGACGCTCACCC             	
     97161	    29	 100.0	    32	.............................	AATTCCAGCTCTGCGGAACTCTTCCCGCTCGC             	
     97222	    29	  96.6	    33	..............A..............	CGCCGGCACCAACGTCTCCAGCGCCCGGCTCAC            	
     97284	    29	 100.0	    32	.............................	CTCTGCGAAGCAGAACAGCCAAAGGCATCGGT             	
     97345	    29	 100.0	    32	.............................	GAGATCGTGCTCGCGCGCTGCCTGGACGAGGA             	
     97406	    29	 100.0	    45	.............................	TGCTGGGACGTCGTTCTCGCGCCATCCCGCGAGTGCTCCCCGCGA	A [97419]
     97481	    29	  93.1	     0	................G...........A	|                                            	
==========	======	======	======	=============================	=============================================	==================
         9	    29	  98.9	    34	GTGCTCCCCGCGGACGCGGGGATGATCCG	                                             	       

# Left flank :   CGTACGGAGATGAACCGTGACCGTCATCATCCTCACCGCGGTACCTCCGGGCCTTCGCGGACACCTCACCCGATGGCTGCTCGAAATCAGCCCCGGCGTCTACGTCGGGTTCGTCTCCACCCGGGTACGAGAACTCATCTGGGACAGAATCACTGAATACCTGGCCGACGGCCGGGCACTGATGGTGCACGCCACTCAAGGCGAGCAACGACTTGATTTTCAAGTGCACGGACACGACTGGACACCCGTCGACTACGACGGCATCACCCTCATGCGTCGGCAGACCGTACCCACCTACGTGCCAGGAAAGACCCGCAGCCGCGCCAACCCGGCGCCAGCCCAAGAACCGGCCGAAGGCGCCACGACCCGCGACGAAACAGTCTGGAAGCGACGCAACGCACGTCGCAAATTCCGCAAGAAGGAATGAATGCATCAAGGTTCGCCGGACGAAACCGAAGCAAAGTAAGGCATGTTCGGCGAATCGCTGCAGGTCAACAAGT
# Right flank :  ACGACTGCGGCCCGTACCGCTGCCGCCAGGCTGGTGCTCCTCGCCAGCGGCGGCCACAGCGGGCATTCCTACAGTAATGCCCGCAATCGAGGCTCGACCCACACGCCCCACTGACCACCAGAACGATCATGAAACGTGAGCCAAGTCAGGTCAGAACGCGGTCCAGAGCCAGGGGCGGTCGATGTCGCCGCGGAGGCAGGCGATGCGGTGTTGGGCTTCGGCTTTTGCGGAGGGGTTGTCGGCCTTGCCGAGGACGAACGCGACCCACCGTAGTTCCTGGAGATCCGCCATGGGGCGGAAGGTCGGTGTGGTGGTGACGTCGTGGCCACCGTAGGCGGTGACGAACTGGTGGTAGTCGTGCGCGGGTATTCGGGCGAAGTCTGTGTAGTCGACCGCTAGCGGGATGAGGTCCCAGGCCGGGGCGCCGACGGCAAATCTGTCGAGATCGAGCAGCGCTGCTTCAGCGTTGCCGTCGAAGGGCACGGCTACGTTGCCCTGCC

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGCTCCCCGCGGACGCGGGGATGATCCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGCTCCCCGCGCACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [45.0-21.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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