Array 1 59024-58698 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRF010000033.1 Anabaena subtropica FACHB-260 contig33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 59023 37 94.6 35 ...TG................................ TTTAGTAAAAGACCTGGAAGTACAACATCCAGAAT A [59021] 58950 37 100.0 34 ..................................... GCAATTGTTCCCGCGCCCAAACCTAATCCAGAAC 58879 37 100.0 35 ..................................... TACTTCAAATACATCTATGCTGTTACCAGACTCAA 58807 37 100.0 36 ..................................... TCCTCCCTCGCTTTCGATACAACTAATATCGCAATT 58734 37 97.3 0 .......C............................. | ========== ====== ====== ====== ===================================== ==================================== ================== 5 37 98.4 35 GTTCCAATTAATTAAAATCCCTATCAGGGATTGAAAC # Left flank : GATATCGGGCATGGGCTGATTGTGGTTTTTGAGTTGTCGTTGTGAGAGACAATAACTCTACTACATCGGCCCTCTCTCTTCATCCTCTTATTTTGGCTAA # Right flank : TACCTACCTTTCTTTGCAATAAAAATTTATCAACATTCGACCAATAAAATACCGCCTATTTCTAAGCGGTATTGAGATAGATTGAATTAATCAGATTTCTTGAACAAAGAATATTTTTATCGTCCAACACCTACATATTGGAATCCAGCCCGTACCAAAGTTTCGGGGTCAAGGAAGTTACGACCATCGATAATTACAGGGTTACTCATTAATTGAGCCATCTTGGCATAGTCGAGACTGCTAAATTGTTGCCATTCAGTCACAAGTACCAACGCATCACAACCATCAGCTAAACGTTCAGCATCAGTTTCTACTAATACACCAGAAAGACCATGACGCATACCAGTTTGGGAAACGATGGGGTCGTAGGCTTTGACTTTAGCACCCAGGCGGTTTAGTTGCTCGATTAAGTTCAATGCAGGTGCATCACGTAAATCGTCGGTGTCTGGCTTAAAGGTCAGACCGAGTAAACCTACAGTTTTACCTTTGAGGATTTTCAG # Questionable array : NO Score: 8.98 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAATTAATTAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA // Array 1 94175-92547 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRF010000004.1 Anabaena subtropica FACHB-260 contig4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 94174 37 100.0 42 ..................................... CTCATGTAAAAAGTCAAGCATTTTTTGGGATTATTCGTGAAA 94095 37 100.0 34 ..................................... TTTTCAAACTCTATTAAACGATTAGAAGAAGTTG 94024 37 100.0 33 ..................................... ATACAATTCTACTGCTTTAGACATGATAAAAAC 93954 37 100.0 33 ..................................... TTGATAATATTCGGCTACCTGTTTAGTTTGTTC 93884 37 100.0 37 ..................................... CTCGCGGGTCTAAAATACTCAGGTTTTATAACATCGC 93810 37 100.0 35 ..................................... TATATAAGTTTCTAAAACTGTAGAAACACAAGTTG 93738 37 100.0 35 ..................................... TTCTTAAACTTGCTTCGGTTTTACCAGCGATGTAA 93666 37 100.0 37 ..................................... ATAGGACGTAAAGGCAATTTCAAAGCCATCGACACCG 93592 37 100.0 37 ..................................... TTAAGCTCAAGGATAGATGGAGTAGAGAGAGGTCTTA 93518 37 100.0 34 ..................................... ACGGCAAGCATGGAGGGGATAATGACTGAATTTA 93447 37 100.0 34 ..................................... TAGAAAACTCTCACCCAAACCTGTTGTTAGACTG 93376 37 100.0 39 ..................................... ATAAAAAACCTGTGCTTTATTACCTGCTGAGGGATGCGC 93300 37 100.0 38 ..................................... TGACCTGGCGATGAGTAAAAGCGATCGCCCCCAACCGC 93225 37 100.0 35 ..................................... TTTATTAAAGCAATTGGTAAAGGTGTGGTGACAAG 93153 37 100.0 36 ..................................... AAGATAGTAAGCCAGTCGGTCATGACCCTCACCCCA 93080 37 100.0 34 ..................................... ACAGAAGATAAAAGTATTTTTGGATGATGATTTG 93009 37 100.0 35 ..................................... GATTTCTTTGGCGATTTTTACGTTTTTCCGGTAAA 92937 37 100.0 32 ..................................... TTCAAAAGAGTTTTTGAAAACACGATTACCAA 92868 37 100.0 34 ..................................... TAGGTACGCTCAGTTATTCCTTAATGGACGGCAG 92797 37 100.0 35 ..................................... CACCTTCAGTTTTTGACTTCACTAAAAGCCGCAAG 92725 37 100.0 32 ..................................... AGCGATCGGGGGCGTGATTGTGGTCGAGAGAG 92656 37 100.0 36 ..................................... CGAGGATCGACAGTGATCATGAACATCAATACGCCT 92583 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 23 37 100.0 35 GTTGCAACATAATAAAATCCCTATTAGGGATTGAAAC # Left flank : TAGTTTTTTGACACATCATCTCATCGTTACAGCAACACAACCGCTTTATCTCGAATGCCTTGGTGAAAGACTAGCAGAGTTTTACAAAGGTTTTGGCTTTGTGCCAATTGTCTTTGAGGACTTGCCGAAATCACTCCAGCGTAAGTTCCAAATTTCTCAATTAGCTAAAAAGCTGCTGAAATTTCCTGTAGTATTTATGCGATATCAAGTGGAATCATAATATAGCTATGGGAGCGATCGCACTAAATTTGCGTCAACCTGTAGGTGTTTTTCCGCCAAGCTCAAATTTTGTGACTGAATCGCTTATCCTCTCTGGCTTTGAACCCTCTTATACCAAAATCGGGGTTGACGCAATTATTCAAATTCTTACCAGTAGAGCTTTTTGGCTTTTGTTCATCATATTAATCTTGACAATCCATTGCCTGAAAAGCTATCTTAGCTCCAGGTTGACACAACTGAACCTTGAAAACCGAATAAATCAATGCTTCTAGCACGGAGCT # Right flank : ATTCAGCGTTTGGTAAATCTGCTGATTACCAACCAGTGAGAACGATCGCTAATCGAATAATAGTGTCTGTGATCTCTATACAGTGGGTGGTGGAAACGATATACCTACTCAAATTCTGGGCATACTAAACCTTGAATATCCCACACACTCAATCTGTAAAATGAGGTCGGTTTCCATGAATCCAACCGTAGATACAACCGTTTTGCTGCCTGGATATCACCTGATTGAGCAGCTTTATGAAGGCGCTAAAACGCTTGTTTACCGTGGGATAAAGCTAGTAGAGACTAAGGAAAACACACACCACGAGCAGCAGTCTGTGGTGATTAAGCTACTACGAGGGGACTATCCCAGTTTCAGTGAACTGTTGCAGTTTCGCAATCAATATACGATCGCTAAAAATTTAAATATTCCGGGTATTGTCCGCCCCTCTTCCCTAGAAAACTATGGTAACAGCTATGCTTTGGTGATGGAAGATTTTGGTGGTGTATCACTGCGAGTAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAACATAATAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 204816-203339 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRF010000005.1 Anabaena subtropica FACHB-260 contig5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 204815 37 100.0 37 ..................................... ATCAATACACGGCTTTACAGCTATCAATACTTGATAA 204741 37 100.0 34 ..................................... ATAGCGTGTTGGGCATAATCACCATACTGAAAAG 204670 37 100.0 35 ..................................... AAGAGTGATCAACTCTTTCTTAGAATCTAATTGAA 204598 37 100.0 35 ..................................... GCTGAAGAGAATTGTTGAGGCTGGACTGCGATCGC 204526 37 100.0 33 ..................................... TAAGCTTTTCTAACACCTTAATAGCTTGATAAT 204456 37 100.0 38 ..................................... GTATAACTCCATCAGACAATCTAAGAATTGAAGCTGAA 204381 37 100.0 34 ..................................... TTCTGTAGTTTCTACAACATTAGTAGAATCTACA 204310 37 100.0 37 ..................................... GTAACAGTTGACCGTTTCTTTGATCAGGAGATAAAGA 204236 37 100.0 33 ..................................... AAACGGCTACTTGGTAAAAACTCTAATTGGTAA 204166 37 100.0 32 ..................................... CTGAGCTTGTTCGATTAACGATGTAACTGCTT 204097 37 100.0 33 ..................................... CCAGTAGTTCCAGGTATAACTTAGAATCCGCAG 204027 37 100.0 34 ..................................... ATCTGTGACAGCACAAATAATAACACCAATCAAC 203956 37 100.0 39 ..................................... AAATCATACCCCGAGTTTACCCGTGAACTGAATCCTCCA 203880 37 100.0 35 ..................................... GAAGTTACACTAGAGACTAGCTCGGATGACCCTGA 203808 37 100.0 35 ..................................... AAGTTGCTTGGCAGACTTACGAAGATTACCGCCAC 203736 37 100.0 34 ..................................... CACCCTGTAGACCCCTAGCGCCCGGAACACCCTG 203665 37 100.0 35 ..................................... GTGACGTAGATGACTTAATTCAGATAATGAATAAT 203593 37 100.0 34 ..................................... GTGGATTTTTGGCATAACAACTGCGCTTTTGAAC 203522 37 100.0 36 ..................................... ATATATGAAAGAAACTCAAGAAAACACCTAAACCAG 203449 37 100.0 37 ..................................... TAGCTGTAACGCTGGGACTGCTGTTTTTAGGGGCAAG 203375 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 21 37 100.0 35 GTTTTAATTAACAAAAATCCCTATCAGGGATTGAAAC # Left flank : CCACAAAGTATAACCTTTGCTTCTCTAAGCTGCTTAAGAGTCGCTTGTCTTAATATTTGTACATAGTTACAAGATTATCGACTTTTCAGGCATTCTTGTTGTTAAATGCCTATTTTGATTTTGATCCCTTATGGTATGTATCAATTTATAATTTGTAATTTGTAATTCTTAATTGAAATTCTGTTATTAGTAATAAACGAGACTTTATACTTACTCAAAATCAGGAACGTAGAATTTCGCTGGTGGTGAGCGTCAACCTAGAGGTGTTTTTCTCAAGAGACACGATTTTATAGCTGAACAGCTTATCATGTATGGATTTGAAGCAGCTTGATGTCAAGATGAGGTTGACGCGATCGCTTGAATTTCTTTCTGGAGTCAGTTTTCAGGTCTTTTTTGAGATCCTGCTCTTGACAACCCAATGCCTAAAAGGCTACTTTAGTTTCACATTGACGCAACTGTACCTTGAAAACCAAATACCATAAGCCTTCTAAACTCCGGCA # Right flank : AACTGTCTCTAATTAACACATATAGATTTTTCTGATTACCACGCATTAAACGCAGAGTTTCATCAAGGTAAGTAATATCTGACCAACCATTAAATGAGAGTGTGGATTTTAAAGGATACTCATAATCTATGTTTAGAGCCTCACGAAAATCGGAATCACTCAAATAACTAATGGCACTTTTTACAGATGTTTCTAAAAAATCAATATTAAGACGCTGAGAATTTTCAATTGTGTAGTGTCCTGCAACTAGAGTAATACCTTGAATATCAGCATCTGCTGTAAATTCAATTAGGTTATTGTACTGTTGAGTATCTGTATAAACCTCTTGAAAGATACCAGTGACAGTGACAGTTACATTAGGTAATTTACCAAAAGAAAGACGTTGTAGGGTAGTTTCTTTTTCTAAACCAAAGGTACTATATAGTAAGCGCCAGCGCCCTTGAATCAACTCAAGATGGTGGGTGGGTTCAGGGTGGGGATTTAGTACCTCCAAAGATGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTAACAAAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 15300-17723 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJRF010000011.1 Anabaena subtropica FACHB-260 contig11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 15300 37 100.0 34 ..................................... TAAAATATCAGAAGTAACTAACTGTATTTTACTA 15371 37 100.0 34 ..................................... ATGGCTGAAGACTTTGAATCAAAATTAACCGAGT 15442 37 100.0 36 ..................................... TTAGTTTTCAACAAATTTCAGATAGCTGAAGAAATT 15515 37 100.0 34 ..................................... TAGTTGATTTCTTTTAGAACCTCCGAAAAGTCTC 15586 37 100.0 39 ..................................... GCCAGAAATAAGTTTGCCTCAATTACCAGAGTTCCAACT 15662 37 100.0 35 ..................................... AGCATCGTAACCGATAACATTATGAAAACACCAAC 15734 37 100.0 36 ..................................... CTAGTATATATACACAAGATACAGATTTGACAGAAT 15807 37 100.0 35 ..................................... AAAGGTAGAATTTTGATATTGTAATAATCGTAAGG 15879 37 100.0 33 ..................................... TCTTTCTTAGTCCAGATATAGATACACGTTCAG 15949 37 100.0 33 ..................................... CCGCTTTAACAGCTTCTTCAACATCAGTAAGTT 16019 37 100.0 34 ..................................... TCAGCACCCGTAGAAGAAAGATTTTTTGCAAGTC 16090 37 100.0 35 ..................................... TTGATAATACAGCTTATCATTTTTAATTTTACATT 16162 37 100.0 35 ..................................... TTCGCAGTTGTCGCTTACTGCGATTTTCTAAAAAT 16234 37 100.0 36 ..................................... AAGCACCTTAGCCCGTCCATTACCGCAAACTTTCAT 16307 37 100.0 34 ..................................... TTTTTATTCAGAAATCAACTTGATGGAAATAATT 16378 37 100.0 34 ..................................... GTGAGACTACTGGGGATTCGTTAGGGTTCATCAA 16449 37 100.0 33 ..................................... GCGGTATTGTGGTCTATGGTGCAAGAACTCTTA 16519 37 100.0 36 ..................................... GTTGTAGACCCACATTTCCGCAACTCCTGTAGAAAC 16592 37 100.0 35 ..................................... CCGAGTAACCGTGAATGGTAGACGGTGGGGCAAAA 16664 37 100.0 33 ..................................... AAGATACCCTAGTTGTTTTTATTACATATTGTA 16734 37 100.0 33 ..................................... ATCAAACATAACAATGGTTATACCACTAGGTAC 16804 37 100.0 34 ..................................... GAGTACAAGGTATCCAATATGGTATCGTGGCAAC 16875 37 100.0 34 ..................................... AGCCTAGTAATATCTGAAAACCCTACAAATAAAG 16946 37 100.0 35 ..................................... GAGACTATTAATTCTTGGACATTTGCCGCCATGAT 17018 37 100.0 40 ..................................... AGATAACGATAATTCAACACAGCAAAACGACACCACAGAG 17095 37 100.0 40 ..................................... AAGGGTCTGAGGCAGTACACAAGGATGTGCGACACATCAC 17172 37 100.0 38 ..................................... ATTTTTTTGATTTAAATTACCTACTTAAATCATGTTTC 17247 37 100.0 36 ..................................... AAATTCCAGAAATTGCACCTCAATTAGTTGACCAGA 17320 37 100.0 38 ..................................... GATGCTTATGTGAATTGGGTAAATAAGTTTCCTTTAAA 17395 37 100.0 38 ..................................... CCATTGTGGGCTACAACGTTCAATATGACCGCTCTAGA 17470 37 100.0 34 ..................................... CTCGTTATCCCATAGTAACGGCTCCGACTTCCAG 17541 37 100.0 34 ..................................... CCTGCGTAGCCCTGGTGTATTTTCGGATAACCTA 17612 37 100.0 38 ..................................... TTACTTCTCATGGTTGCAATGATGTGAGATGAACAACC 17687 37 73.0 0 A.C.T........CC...AG........T.G.A.... | ========== ====== ====== ====== ===================================== ======================================== ================== 34 37 99.2 35 GTTTCTATTAACATTAATCCCTATCAGGGATTGAAAC # Left flank : AGAAGATAAGCGTCGTACCAAAATTCACAAGGTTCTCAAATCTTATGGACAGTGGATGCAGTATTCTGTTTTTGAGTGTGACCTAACACCAACTCAGTATGCTAAACTGCGATCGCGTCTAGCCAAACTCATCAAACCAGAGCAAGACAGTATCCGTTTTTACTGTCTCTGTGCCTGCTGTCAAGGTAAAATTGAGCGCATCGGCGGCGAAATGCCAATGGACACCACTGTATTTTTCGCTTAACCTGTGCGTCAACCTGTAGGTGTTTGGCAAACCATCTCAAATTTTACGCCTCAAAGCTTTACTGGTTATACTTTTGAAGCCTCTTACACCACAATTGAGGTTGACGCAAACACCCCAAACCCTCGCTATAACTACTGTTCAAGCAATTTTTTCTCGTTCACTCTTGACAACTCAGTGCCTGAAAAGCTAACTTGATGTGGGGTTGACGAAACAGAACCTTGAAAAGTAAATATGGTAAGCCTTTCAAACCTGGGCC # Right flank : CAAGTGCTATTTTGGGCATACTAAGGAGAAACTTAGATAATCTTTTGGGTTACTCATCCCTAATTGGGATGAAATGCCTAGAAGAAAGTCAATACCTTGCAGGATTCAGCAAGATGGTGTTTTTCGACAAAATTATTTCGCAACAATCTTCTCAGACTTTCCTGTGGAGTATTCTTAACAGCATTACAGATCCAATTTTTGTCAAAGATAGACAACATATTTGGGTATTTGTCAATGATGCCTTATGTAAGTTCATGGGATATGAACGTGCAGAACTAATTGGTAAATCTGACTATGATTTCTTTTGCAAAACAGAAGCAGATGTTTTTTGGAAGAGAGATGAACTGGTATTTACAACAGGCTTGACTGATGAACATGAGGAGTTAATCACAGATTGTCAAAGTGAAATTCAGATCATTTCTACCAAGAAAAGTCTATTCTTCGATGAAGTTGGTAATTCATTTTTAGTGGGTTCAATTCGGCTGATTGCTTCCAAAAAT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCTATTAACATTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //