Array 1 118991-117986 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIMI01000014.1 Escherichia coli isolate 569A, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 118990 29 100.0 32 ............................. ATTAACGGTCGCATCATCATATTGAAAAAATC 118929 29 100.0 32 ............................. TTATATAATGGCGCATTATTTTGGCGTATCTG 118868 29 100.0 32 ............................. CACATTTCGCAAGACGCATACGGAATCGCGGC 118807 29 100.0 32 ............................. CGTTTATTGCGGCTATTGAAGAAGAGCAGGAA 118746 29 100.0 32 ............................. AAGTATTTCCGTGCACCGTGGGAGGCGTTTTG 118685 29 100.0 32 ............................. CGCGGGATACGCCGGTTATATCACTGGTAGTG 118624 29 100.0 32 ............................. TAGTTGTGCTGATTTTTGATGGATGGTTATAA 118563 29 100.0 32 ............................. GAACTTGCTTACCTTTGCTGTGCTCGTCAGAA 118502 29 100.0 32 ............................. GGCGTTGGTGGCTGGGGCCGCCCGGTTGTTGA 118441 29 100.0 32 ............................. AAATGGCATTCGCTGTTGGAATTATGGGGTAT 118380 29 100.0 32 ............................. AGCGATTTCAACGCGGCGACGGTGGACTTAAT 118319 29 100.0 32 ............................. CCAGTAGGCGATTTGCGGGGCGTTCATGTTTT 118258 29 100.0 32 ............................. AGTCAAAATTAGCAAAACTTGATTCAAATAAC 118197 29 100.0 32 ............................. TCCGGCGAGCTGGTCACCTGGCTGAATAAATT 118136 29 100.0 32 ............................. GAAACTGAAATCGCGGTTGATAACGCTGATAT 118075 29 100.0 32 ............................. GGTAAAAACACGGTCTGAACCGACATTCATGT 118014 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTTGCCGCAGGTGAAATTGAACCACCACAACCTGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGCGGTCACCGGGGGCACGGCGGATGAGTATGGTCGTCGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTTGAAGTGCGTGCCGGTGTTTATGTCGGAGATACATCCAAACGTATTCGGGAGATGATCTGGCAGCAAATCTCTCAACTGGCAGGTTGCGGAAATGTGGTAATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGTGAAAATAGACGTATTCCGGTGGATTTGGATGGGTTGCGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GACGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCATACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTGCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATACCGGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCTGGATTTGTGGTGGCGGCAATTCCATGGCTGCGGGCAATTGCCAGCGCCCGGTCGCGCGTTAATTTCCTTACTGCTTCAGGTGTTTTTACGCCACTGTTGAAATACAGCTTATCGCCAACAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //