Array 1 99419-98929 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAHPY010000004.1 Streptococcus pyogenes strain Bra031, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	================================	==================================	==================
     99418	    32	 100.0	    34	................................	ATCAATATCTCCTTTAATAATGATTAATGTCAAA	
     99352	    32	 100.0	    34	................................	CATGACCTGTTTGCCAATGGTTAGCGTTCCTTTA	
     99286	    32	 100.0	    33	................................	AATATAATTGATTGGTTGGATGTTTAATGTTTT 	
     99221	    32	 100.0	    33	................................	ACCTTATCAATCATTTTCTGCGTCATTCCCTGT 	
     99156	    32	 100.0	    33	................................	AACTGATCTCGTCCAAAAGTCAAAAAAGAAAGG 	
     99091	    32	 100.0	    34	................................	TTTTTCGGATATAACTGATTTTTGGTTAAAGGAT	
     99025	    32	 100.0	    33	................................	TCCTCTCATCATATCTTTTAAATCTTTAACATC 	
     98960	    32	  96.9	     0	...............................G	|                                 	
==========	======	======	======	================================	==================================	==================
         8	    32	  99.6	    34	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                  	       

# Left flank :   AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAAAACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  ATGAACCCGACCTCATTAAAAGAGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATACCCCAGTCTATGGTTTGTCTGTCTTGCTTTAGATACAATAAGGATAATCTTAGAGAGGAGTTGCTTATGACCTTATCAATCGTCTTAATCGCTTCCGTTTTTGCGGCAGGCTTGTTATCATTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTTTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACCTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATCATTCTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA

# Questionable array : NO	 Score: 9.24
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : NA
//