Array 1 2505-3505 **** Predicted by CRISPRDetect 2.4 *** >NZ_NUSP01000032.1 Bacillus wiedmannii strain AFS044295 AFS044295_120_F7_Contig32_140618, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== ======================================== ================== 2505 27 96.3 40 ....................A...... CTCAAAATAATAAGTTTCTTCTGACTCCTCGTTGTTATCG 2572 27 100.0 37 ........................... CAGAAACCAAATCTACATTGATGTCCTGATACTTAAG 2636 27 85.2 38 ............GTG...C........ CAGGACACTATGACCATGTACATGTAGACCGGCAAGAC 2701 27 88.9 39 ......C............T......C CGATAGGTATCACGGATAGCATCTTTTCTTTTAGATTCG 2767 27 85.2 31 ............AT....C.A...... CACTGAAAACAAAATGTTAGAAATGATTGTT 2825 27 77.8 37 ...........AGTG..C..A...... ATAAATCATCTTTTTTCTTTAAAGTTCTGTTATGATG 2890 27 74.1 38 C...A......TGTA...C........ CAACGATTTATACAGATGTTACAACGGGGACTGTCGTC 2955 27 88.9 38 .............TG...C........ CGTAACGCCACTCTACTAATCCTGAACAATCAAAGTTA 3020 27 85.2 39 ...........TAT....C........ CAGTTACCTAAGTCCCCAATATCAGCACAAATGATGTCT 3086 27 100.0 40 ........................... TAAAAATCTCCCTAATTTTGAACGAGGTTTTTTAAACCAT 3153 27 88.9 38 ............ATA............ CCTTGAAATCTGTTGATGTGAATGATGAAGCCTTTGCT 3218 27 77.8 38 C...A.......ACA...C........ CAGGACACTATGACCATGTATATGTAAGCTGGCAAGAC 3283 27 88.9 38 ......C......G...........G. CGAATTTAAGTCAGAATTAAATTAAAAATTGGGAAACC 3348 27 81.5 40 ............GTA...C.T...... CGATATGAATGGAACGTATGCGTTTTATATGTTTGTGAAC 3415 26 77.8 38 ...........TATA...C.-...... CTGCTATTGTAGTAGATTATTTTCGATGTTCAAACATG 3479 27 77.8 0 ....A.......GTA...C.......C | ========== ====== ====== ====== =========================== ======================================== ================== 16 27 85.9 38 TTTATATCCCACTACGTTTAGATAAAA # Left flank : TAAATTAATCATGTTACAGATATCAAATATACATAACGCTTAAAAAATTATGGGATGGGGGAATTATGATGAAAAGTCAAAAAGAACTTAGCTATCATTTTAGAGAGTTTTGGGATTTTGAGTATATTTGTTTGGAGAAAAAAGGCTTGGGGTTCCCAGAATTAGAAGAAGTATTGTTGAAATATCATATGTATAAATCTGATGAGAATTTAGAATTTAAAGAGTGTTGGATACATCGTGAATTTGTGTATGGAGAAGAATTAAGAACAGTTCAAATTATATATGAAGATAGTAAAATTAATAGGGTTGTTCGTTTATGGGGATCTAAGAGAAATAAAGATGGAAAAGTTCTTGCAATGACAATGGACTTTTTAAATATAGAAACCAAAGAACTTGAATGTGAAATTGATTTAATGAAAGATAAAAAATTTGAAGGTAGAACCCATAGAAATAGAGCCCTTTTTAATTAAGACTCTATTTCTATGGGTTCATTATAAACT # Right flank : CCCCCTATCTATATAGGAATGTACACTTTATGATAGCAACATTTTACTACGTGTAGCAACGAGCATTTTGCAACAAACCATCAGTTGTATTTTTGTATTCTCTTCAAACATACTAAAAAACTCTGTCATAGTAAGAGTTTCTGTACGTTTGATAAAAACAAGGGTCACTGCAAAATTAAGGAAGTATAATTCCTGTTCCTGTTCTCTTTTCTTTATCAAAATCATACTTACAATTTAGAGTGTGAATGTATTGAAGCCCAGGAATATCAATTGCCTTTGTTTCGATTCCGTATCGTTGAACTTGTTTTCTAGAAATAGAGGTTGTAAGCTTTTCGATTTGCATTCGTAATACTTTTCGCTGTCTAGAATCTTTTTCCTGTTTAAATGTTTTAAATAGCTCAAGATTCTCTACATATATAGAACAGGGAATAACTTGATAATTATCAATATCACGCAGCAACTTTTGTGCTTCTGTATTTCCCATATCGTTTAGTGGAAGT # Questionable array : NO Score: 4.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.30, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.21, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTATATCCCACTACGTTTAGATAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [12-29] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //