Array 1 42144-42770 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ADXO01000036.1 Actinobacillus pleuropneumoniae serovar 6 str. Femo Contig9, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
     42144	    28	 100.0	    32	............................	TTCGGAAGCACTATTCTTCTTATCAGCATTTA	
     42204	    28	 100.0	    32	............................	TAACGATAGTGAGCTTTTCGTCAATTTAGGCT	
     42264	    28	 100.0	    32	............................	TACACCGGAACCTTGTCCTTTACCATTACCTG	
     42324	    28	 100.0	    32	............................	CGATACCATTTGTCGTTAAGCATTACGGTTTC	
     42384	    28	 100.0	    32	............................	ACTCGGAGAAGAACCGGAATTTCCTCCGGAAC	
     42444	    28	 100.0	    32	............................	TAGCGATAAAATACATCAAAACCATCGTTCAT	
     42504	    28	 100.0	    32	............................	CTGTTCCCTTGCAAATTGTATGCCTGCTTTAG	
     42564	    28	 100.0	    32	............................	CTAAAAATCCAAAAACAGCCGAAGATATTAGT	
     42624	    28	 100.0	    32	............................	TATCCGATAACCTCTTCCTTAGTTTTGCCACT	
     42684	    28	 100.0	    32	............................	TTGCCAATATCGCAAAATACGTTAAAGATCCC	
     42744	    27	  89.3	     0	.....................-C.C...	|                               	
==========	======	======	======	============================	================================	==================
        11	    28	  99.0	    32	CTTCACTGCCGTATAGGCAGCTTAGAAA	                                	       

# Left flank :   AAAAACACAATTAATCGGAGAAGGTTTACAAGACTATGTGCTTATTACATCGGTAACACCTGTACCGGAAGAAATAGTCGAATACCACCGTTACCAAAGGGTACATAGAAAAGGTCAAAGTGCTATTCGCCGTACCGAGCAATTTTTAGTTCAACAAGGAAAATGGACTGAAGAAATTCGCCAAGAGATGTTAATACATCAGCAGAATCAAAAAGTATTTCCGCACGTAAAACTCAAGAGCGGTAGCACTAAACAACATTTTGTATTAGCGATACGACAGCTTCGTTTAGCAGAACCCTCTTTCGGCTTATTTAACACGTATGGATTAAGCAAAATAGCAACCGTCCCACATTTCTAACCTATATTTATAACCCTTTTTTCCAGAGAATTTATTTTTCCTTTAGAAACAAAGGGTTATAAAAACCTTTCAAAAAAGGGATTTTTTGATTAAAAGCTCTTTAACAACTTGGTATATCTAACATTCTAAAGTAAAATAACGA
# Right flank :  ATCAACTGTATTCCATAAATAACATCGGAGAAAATAATATGAAAAAAACACCTTATATTCCGTCTTCGGATTTAAAGACGATTTTACATTCTAAGCGGGCGAATATTTATTACTTAGAACACTGCCGAATATTATTAAACGGCGGGCGTGTAGAATATGTTACTGATAAAGGCAATGAATCACTCTATTGGAATATTCCTATTGCCAATACCATCTGTTTACTATTGGGAAGTGGTACTTCGATAACTCAAGCGGCAATGCGAGAGTTGTCAAAAGCAGGGGTTATGGTCGGTTTTTGTAGTGGAGGCGGTACGCCGCTATTTAATGGGACGGAAGCAGAAATCGGTTGTGATTTTTTTAGCCCTCAAAGTGAATATCGCCCCGGCGAATATCTACAGCAATGGTGTCGATTTTGGTTTGATGATAACAAGCGGTTAAATTCGGCAAAAACTTTACAATTGGCACGGTTACAATTACTACTTCGAACTTGGAATAAGTTT

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTCACTGCCGTATAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         F [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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