Array 1 619-50 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIGW01000048.1 Tsukamurella asaccharolytica strain HKU71 NODE_49_length_627_cov_1.390000, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 618 29 100.0 31 ............................. TTTTGTGCAGCTGCTTCTGCGCTCTTAATAA 558 29 93.1 31 ............G...............A AATCGATTGCGGATATGCTCCATAGGTGAGC 498 29 100.0 31 ............................. ATTTCATACACGAGAACTATAAATAGAGGTG 438 29 96.6 31 ............................G CAACTGTCTTCCCGCCGATCTGCTGCAAAGA 378 29 100.0 31 ............................. TGATGCTCTCTGACTTAGCTTGGTGATCTGT 318 29 100.0 31 ............................. TAAGGTAGGCCAGAAAACCTCTTATAGTATC 258 29 96.6 31 ............................G GTGCATCTTTCGCTATCAACATATAACGAAT 198 29 100.0 31 ............................. AAAGCTGATGAGATCTGGATAGTGGAAGGAA 138 29 100.0 31 ............................. CTTCGCTTTCGAAGATTGTGCGTAATCTATG 78 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================== ================== 10 29 98.6 31 GTTAACCGCCGCATAGGCGGCTTAGAAAT # Left flank : CTTGCCAG # Right flank : TATCCTATGTTAGAAGCAATCAAAGCGGAGCTGTTAACCGCCGCATAGGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACCGCCGCATAGGCGGCTTAGAAAT # Alternate repeat : GTTAACCGCCGCATAGGCGGCTTAGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //