Array 1 16643-18065 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFFN010000002.1 Streptococcus cristatus strain SS-1725 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 16643 36 100.0 30 .................................... GGAGACATACGGGTTAAAGATGGACTAGCT 16709 36 100.0 30 .................................... TTTAACTCGAAGCAATGAACTTCTAGTCAC 16775 36 100.0 30 .................................... GGCGATGCTGTTGATCGTTCAAACAAGGCC 16841 36 100.0 31 .................................... CAATCAGAGGAACTCTGAAAACCAAAAACAA 16908 36 100.0 30 .................................... AAATTATTTAGTGGTAACAATTAGTCCATT 16974 36 100.0 30 .................................... TACCACACAAGAAGCCTTAGCAAAAGATAT 17040 36 100.0 30 .................................... AGTCACGCTTGAAAATGCCATGTTAGCTGT 17106 36 100.0 30 .................................... TTTGTCGGGAAGGATGTAACAGATATTCTG 17172 36 100.0 30 .................................... GTGAGTTTGCGATTCTTGTTATTGACGAGG 17238 36 100.0 30 .................................... TTTTATGTGCTGATGTTTTCCGTTTCTGCT 17304 36 100.0 30 .................................... GCTGGTCAGCCAGGAATATTCACCAGATAC 17370 36 100.0 30 .................................... TGCACCTTACGATGAGGATCCTCGTATTAT 17436 36 100.0 30 .................................... AGTCAGGGCGTTCCAAGCATCGGTATTGAG 17502 36 100.0 30 .................................... TCAATGATTTTAAACTTTTTGTGGATGGTG 17568 36 100.0 30 .................................... TTCTCTTCAATAATTTCGGCGTAAGATTTA 17634 36 100.0 30 .................................... AATACGATTTAAAAAAATGACGAAAATCAA 17700 36 100.0 30 .................................... CGGCATTATCAGAAAGTATCTTGACCCACA 17766 36 100.0 30 .................................... AGATAAAATCGTAACCCGCGCAAGAGGTAA 17832 36 100.0 30 .................................... TGAAAGCTAATGAAGATGCTATTAAAAAAT 17898 36 100.0 30 .................................... CATCTCCTTCGCCCATTTTAGCTCTTAGCA 17964 36 100.0 30 .................................... CAATTTCTTCATTCTCTACAACTGCTCTTG 18030 36 97.2 0 ...................................A | ========== ====== ====== ====== ==================================== =============================== ================== 22 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAGCTCAATGACAAGCCAGAAGTGAAGTCCATGATTGAAAAGCTGGTAGCTACGATTACAGAATTACTGGCATTTGAGTGCTTGGAAAACGAATTGGACTTAGAATACGACGAAATCACCATTCTGGAGTTAATCGATGCGCTAGGGGTCAAAGTTGAAACTCTAAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTTCAAGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGACCGCCTATCTATCAAAGGATGAGTTAGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAGAGTCTTATTTGTAGAACCTCGAAAAGTCTTTGATTTTCCGCAGTATGTGCTGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGGGTAACAATTGGAACCTGACGAACTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AAAGCTACTCATTTTTTGAGTAGCTTTTTAACTATTCCATCCCTACGTATAGCTCATTCCTTTGTAGAAAAGGAAAACGGCTAGTGTGACAAAAAGTAGGGTTGCTCCGATTCGCTGGCTGGTACTATACATCCTTCTCTCCCATTTGACTGGAAAGATGACTGCTAGAAAGGCCCCACCTACCGCGCCACCAATATGCCCTGCTAGGCTGATTCCTGGAATCAGGACACTTCCGATGATATTTATCACGAAAAGCGTCAGGTAAGATTGCCCTAACTGCTGGATATAGGGGTTGCGAGTTGCGTAGCGCAAAACAATAATCGTAGCAAATAGTCCATAGAGGGAGGTGGATGCTCCTGCTGCTAGGACTTTCGGTGTGAAAGCAAAAACAAAGAGATTCCCCATCATTCCTGATAAGAGATAGAGAAAGAAAAACTGCTTAGAGCCGAAAATCTCCTCCACCTGTCGTCCAAGAAAGTAAAGTGAAATCATATTAACAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //