Array 1 278423-276275 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNLK01000012.1 Schaalia meyeri strain DSM 20733, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 278422 36 100.0 28 .................................... GACGACGCCCGATCGGGTGATCGCGGAT 278358 36 100.0 28 .................................... GCCTTGATAGGACCCATCATGCATGGAA 278294 36 100.0 28 .................................... GACCGGGCGAGCGAGTGTTCGGGGTCTG 278230 36 100.0 28 .................................... GGCAAGTCGCGGCCCATGCTCTTCCACG 278166 36 100.0 28 .................................... CCTGCTCAAGGGCATGCTGCCTGAGCCG 278102 36 100.0 28 .................................... CGGGCTAGTGGCCCTCGCACTGAGTGCT 278038 36 100.0 28 .................................... GATCGCGCTCGCGGGCACGATCAGCCTA 277974 36 100.0 28 .................................... ATCGGCGTGCTGTGGGCGATCGAGGGCG 277910 36 100.0 28 .................................... GGCCGGTCTTCGTTGTCCCCACATCGTG 277846 36 100.0 28 .................................... GGACCCGGCGGCGATCTTCGGCGCGGTG 277782 36 100.0 28 .................................... TCGTGGTGCGAATCGTGGGCTGTCGAAG 277718 36 100.0 28 .................................... GGGACGCCGCGCTCACGCAGCGCTTCGG 277654 36 100.0 28 .................................... GAAGACGCGGTGTCCATCGTAGTAGGCG 277590 36 100.0 28 .................................... GTTGCGGCGCTCACCATAGCTCCGAAGG 277526 36 100.0 28 .................................... CGACCATGAGTAACCTGAAGCTGGCTCA 277462 36 100.0 28 .................................... ACGTTCGCCACCGTCGTGGACTCGCAGC 277398 36 100.0 28 .................................... TCGTGAATTCGCGGTCGTTGAGGGTCAG 277334 36 100.0 28 .................................... CCCTCTTTTTTGTCGATACATTCGATTA 277270 36 100.0 28 .................................... GACCAGGCCAGCGCCGTCGAAGACGCCT 277206 36 100.0 28 .................................... CTTGTCTTGGTACCAGCGTCCGCACCGC 277142 36 100.0 28 .................................... TCCGGTCTGCGCCGTGTACATGTTCTTC 277078 36 100.0 28 .................................... GCGCTTGGCATGAATCAATCTCAGGTAT 277014 36 100.0 28 .................................... CAAATCTCGTCCATCGTGACCATGTAGG 276950 36 100.0 28 .................................... CTCGCCGGCGTCGAGTACACCGGCAACC 276886 36 100.0 28 .................................... ATGGTTGCGGCAAGGTAGAAGCGGATGG 276822 36 100.0 28 .................................... CGGAGGATGTCACTCATGGGCGGCCCCC 276758 36 100.0 28 .................................... AGGAATCCAGTGCAAGTCAGTCATGACG 276694 36 100.0 29 .................................... TGAGCGAGGTCGCCGTGCGCGGCCAGGAC 276629 36 100.0 28 .................................... GTGCCGGCCGCGCGGATGGTTCCTTTGA 276565 36 100.0 28 .................................... ATCGAGTTCACATCCATTGCCACGCCGA 276501 36 100.0 28 .................................... GTCGGCTCGTGCACCCAGTGCGGCGCGG 276437 36 100.0 28 .................................... CCACAAGACCGCGATCGATGCGGGCATC 276373 36 100.0 28 .................................... CGTGTTTCCCGCGCCCATTCCTGCCCGC 276309 35 77.8 0 .......................GC.C-...AT.AT | ========== ====== ====== ====== ==================================== ============================= ================== 34 36 99.3 28 CAGTATATCAAAGGGGATTGGTGATTGATTCCCAGC # Left flank : GAAGGACATGGGATTCCTGCTGTGGCTGAGTCTCTGGCGCAGTCGTTTGGACGGTACGTGGAGGGGGACGTGGATCGTCTGCGTGTGGTGTCGTGGCAGGGGCCCTCGGCGGTAGGTGTGGGTGAGTGAGATGGCGGATGACGCAATGTGGTGCTTGGTGATGTTCGATCTTCCGGTGGAGACGAAGCGGCAGCGACGCGAGGCAACTAGGTTCCGTCATGATTTGCTGGATTGGGGTTTTTGTATGGTCCAGTTCAGTGTGTACGTGAAGTATTGGCCGACCGGTGGGCAGGACCATGCGACGCTGCGTGCGATCAAGACTCACCTACCGGAGGGGGGCCAGGTGCGAGTATTGGCTTTAACGGACCGGCAGTGGGCCACGGGGCTTCGTTTTGAGAACGCGAAGCCCCGGAAGGAAGCTGGAAGCCCCGAGCAGCTCATGATTTTCTGACTGAGATCCCCTGGTTTTCCGCAGGATCCTGCGGAAAACCAGGGGATCT # Right flank : TGAGGGTGTAGTTGGGGTCTGAATCCTCCTGTTTCGAGGAGGCAGCGGGTGATGTAGTTGGTGAGGTTTCGGAACCCGAGTGCGGATCCGCGTAGGTGTTCGAGACGTCCGTTGATCGCTTCGGTAGGACCGTTGCTGGTGTGTGGATGATCGAAGTAAGCCAGGATGTCCCGGGATCGGCGTTTGAGCGTTCTTCCCAGTGTGATGATCTCCGTGAGGGAGCGAGGGACACCCGCGTTGCTGAGACGGTCTATTTCGGCTTGCATCAGGGCCTTACCGCGGATTTTATTGGGATCGCGGTAGGCGTCGATAATACTCTGGTAGACGCTCCAGGTGACTTCGAGGGCGACGTGGCAATCGCTGGCGAACAGGTCGAGGATCCGGTGTTGTTGGCGCGGGGTGAGCAGGCAGGATCTGGTGTGTAACATTCTGCGGGCCTTGTACAGGGGATCGGTGGCACGCCCACGCCGGTGGTGGAGTTCTTGCTGGATGCGCCTGCG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAGTATATCAAAGGGGATTGGTGATTGATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.40,-1.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //