Array 1 243833-245782 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUG01000002.1 Enterococcus canintestini strain 49 E49_contig_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 243833 36 100.0 30 .................................... CACAGAGGGTTTTAATATTCTAGGTGCCGA 243899 36 100.0 30 .................................... CAGGAAATGAAACTGCAGAACGTTTCAGGA 243965 36 100.0 30 .................................... TGTCCCGACACCAATGACTACAGGTGCAAT 244031 36 100.0 30 .................................... GTATCTAATGTCAACATGGACGCCGGTTGG 244097 36 100.0 30 .................................... CTACATGGCAACAGGCAAGAGTGATGGCAA 244163 36 100.0 30 .................................... ATTCGACACTCGGCTTCGGGTCATAGGTTC 244229 36 100.0 30 .................................... TATACGTAACCTGTAAAATAATTACTACTG 244295 36 100.0 30 .................................... TTGTGATGTTTGTTCTTTTGTCTCCAATTT 244361 36 100.0 30 .................................... AAATTGGCTCACCACAAGTTATAGTTCCTA 244427 36 100.0 30 .................................... GCAATACTAATATATCAGCCTTTCTAGTGC 244493 36 100.0 30 .................................... CAACAATGCATTAGAAGATGCTGTTAACGA 244559 36 100.0 30 .................................... ATTAACGATTGATAAAACTCAGCTTGCTCA 244625 36 100.0 30 .................................... CATTTGCTCTATCTTCGTCATAAAGAACTT 244691 36 100.0 30 .................................... ACTAGAGTGTCTTGTTGAGTTGTGGGATAC 244757 36 100.0 30 .................................... ATTAACGATTGATAAAACTCAGCTTGCTCA 244823 36 100.0 30 .................................... CAAACTTTGTCACATTTTTATGACTGTTTA 244889 36 100.0 30 .................................... GCTTTACATATTCTGAACATCATGCTAATA 244955 36 100.0 30 .................................... ATTGTCTACTTTTTATTTTTTCGCTTTTTG 245021 36 100.0 30 .................................... GTATTTTACGGAAACGCTATTTTTGGAACT 245087 36 100.0 30 .................................... AAATAGATTGCGTTACCATACTGAAAGTGA 245153 36 100.0 30 .................................... CACACCAACCCAAAAAATAACACTCACCAC 245219 36 100.0 30 .................................... TGGCGGGTTTGATATGCCAAAACATTTAAA 245285 36 100.0 30 .................................... AAACGTTGCTAACGTAGTAACTTCATTGTC 245351 36 100.0 30 .................................... ACAGCAAGATGCGGTTAAGCTTTTGGAGCG 245417 36 100.0 30 .................................... GCATAGAGCCATCAAAACTACTATTCACAC 245483 36 100.0 30 .................................... TTTTCAGTCCTTTTCCAATTTGTCGATTCC 245549 36 100.0 30 .................................... AGTCATTAAGATTGAGGGAGTAGCCAACGT 245615 36 100.0 30 .................................... CAAATTTTAAAACTACCACAAAGGCAACGC 245681 36 100.0 30 .................................... AACCTTTTTCGTTTTTGCCTATATGGTCTT 245747 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 30 36 100.0 30 GTTTTTGTACTCTTAAAAATTGAGTAACGGTAAAAC # Left flank : AAAAATGACGTGGTTATGGATTAATAATCCAAACGCCTTTATGGGACGTGAAGCTTTTCAAAACCTATTGTGCCAACTCGCAACCATTAATGATGAAACGGGATTATTGTCTGTATTTGTTTTAAGTGAAGATTATTTAGATTTAGAATTCAACCAGCGCAATATTTCTGAAACTGTATTATTATTTCAAGGATATCAACAATTACCAGAATTTGAAATATTGAAGGAATCCTTTGCGCGTAATTATCCTTGCGAATTTACGTTGAAAGATGAAGTTTTTATTGCTAGTTTGTTTAGAATTTTTCCATATATTGGGTCGGTTAAGAATCCTTACTTAAAAGAAAAGGACATGGTATTATTAAAAGTGTTAGAGGAGTTATTAGGGATTGATACTTTAAATCGTCAATGTCAAAATAATGAAAAATTGAATGATTTAGAGTGCAATTTTCTTAATAATTGACCAAAAACCAAGAACTTTTGAATGGAGACGTCCATTTGAG # Right flank : CTGCCTTTGATTTAGAAAAGCCTCTTGGATAGTTTTTGTATTCTTAAAACTGCATAATCCTCGAGCCTACTTGCCTTACTACGAGCCTACTTGACTTACTGCAATGTTTTCCAATGTATTAGAAAATATTTTAATTTACTCGCCAGTTTGCGCTAAAAAATTAGTAATCTGCCAACACTTCTCTTGTCAGAACTCGTTTCGATGGTTACAATTAGATTAGAAAAAAATGAGTTTTTTTAGATGGACTGTTAAAGAGGAGGAATTCCAGTGAAGCGGATTTTTTTACTAATGGGTACGTTATTACTTTTAGCCAGTGGCGCTTGTGGCTATTTTTTATATCAAAATCAACAACTTTATCATCATTCGCTAGAGCAAGCAGATGAGGCGATTGCCAAAAAAGATTACCGGAACGCTGCGATTCATGTAGAACGAGCCCTATTTATTAAAAAAAGTTCTAAAGAAGCGTTAGCCTATAAAGAACAGTTGGAACCAGCTATGAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTTAAAAATTGAGTAACGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-3.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 83541-81337 **** Predicted by CRISPRDetect 2.4 *** >NZ_LHUG01000003.1 Enterococcus canintestini strain 49 E49_contig_3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 83540 30 100.0 36 .............................. ATTGGTTGAAGAAGTAAATCAATTAGATAAGTCAAA 83474 30 100.0 35 .............................. GAACATATTATGGCGAAGTTTTAGAAGACGGAAAA 83409 30 100.0 35 .............................. AACTGAAAAAGGCGACTACATTGGCACTTCATCTA 83344 30 100.0 36 .............................. GTATTTCCAGAATCATTACAGCCTGTCTCTCCCTCT 83278 30 100.0 35 .............................. CATTTAACATATGTTTGCATTGTTGGTTTTCCGCT 83213 30 100.0 35 .............................. ATTTTCTGCAACTCACGTTCAGCAGTCACCTTGCG 83148 30 100.0 35 .............................. GTAATTTCACCTGTATCCTCGTCAACAGATTCGTA 83083 30 100.0 36 .............................. GATGATATTAAGCTTGAAATTGGCTATGTTCCCTCT 83017 30 100.0 35 .............................. TTGGGTCTTGGCGAGTTCTTCATAGCAATCACTCG 82952 30 100.0 36 .............................. AAGAGATTCATCGGGTTAATATTACTTACGATATTC 82886 30 96.7 35 ....................A......... GATATTGAGATATTTTATCCATCATCATCACAAGG 82821 30 100.0 36 .............................. TCTTTTTGTACGTCAGCGGGTACGACGTTTACACTC 82755 30 96.7 35 ...T.......................... ATGAAACGGCTTTGGATTAATTCTCTTGTCAAAAG 82690 30 100.0 36 .............................. AACAAACGTCTCAACACCCGTTCCCGCTTTACCGGC 82624 30 100.0 36 .............................. CACTACACTGGCAAGTCTAGGACGGAGCAGGTCACC 82558 30 100.0 36 .............................. GAAGATAAATCACTTGTCGTTGTTGAACGATTCATT 82492 30 100.0 37 .............................. ATATTTCTTGGATCAGCTTTTAACTTAGCTGCATCAA 82425 30 100.0 36 .............................. TTTTCCATCTTTGTCTTTATGAATCTGAGCCAATCC 82359 30 100.0 38 .............................. GCAGAAAGGTGGTAATCAGTTTGAATAATTTTCGAAAG 82291 30 100.0 38 .............................. CATGCAGCATCAAACATCTCTGCTAAATTGTAAGTGAT 82223 30 100.0 37 .............................. TGTTGTAATTCCGGCTTGAAATCATTAAACATGAGCC 82156 30 100.0 36 .............................. TTCTGAGTAGTACCTGGTACCTTCCAAGTAATCTCC 82090 30 100.0 35 .............................. TATTTTAGAGTTTCTGCTTCAGAAAGAACAAAAGA 82025 30 100.0 36 .............................. TATTGACCACGCCATCTAAACCTAAGCGCCGTCTCC 81959 30 100.0 36 .............................. ACAATCAAATCAATTAATATCGCCAATGAGGATCTG 81893 30 96.7 35 .................T............ ATGGGCTGGGATAAATTAATGGCTAGTGCGTTAAT 81828 30 100.0 36 .............................. GATATTGAGCTTAAATATGGTCGTGATGTATCGAGT 81762 30 100.0 35 .............................. TCAGCATCAAATAGTGCACAAAATCCATCTTTATT 81697 30 100.0 36 .............................. AGCGACTGAAAATGCGGTTGTGCGCAAGGTGACTGC 81631 30 100.0 36 .............................. TGTGCTAGCACGGTGAATCATTAGTTGTGCATTGGA 81565 30 96.7 36 .......C...................... CCAACATGCTTTTTTACTTCAACTTTTTTTAAATAA 81499 30 96.7 37 T............................. GCATATCATCGTCAGAGTATGAACTCTTCAGACTTTT 81432 30 96.7 36 ...................A.......... GATAACGTCTTTCGTAAGATTTCAAACCCAGAAAAT 81366 30 76.7 0 ......................G.TCCTTC | ========== ====== ====== ====== ============================== ====================================== ================== 34 30 98.7 36 GTACAAATCTAAAAATAGTGGAATGTAAAT # Left flank : AACCTTTTAGAATTTGGTGGTGAATCTATGTATATAATCTTAGTATATGATATTTCATTAGAGATGAACGGTGCGCGGGTTTTAAATAAAGTCTTTAAAATTTGTAAAAAGTATTTAACCCATATTCAAAAATCCGTTTTTGAAGGAGAAATCACACCTGCAAAACTAAAAAAATTAGAACAAGAATTAAAAGAATATATACGAGATGATCTGGATTCTGTTCTAATATTTAAAAACTCTAATAAACGATGGTTAACAAAAGAGTATATTGGTATAGATAATTCAGATATTCTCTCTAATTTTTTTTGAACTTCTAATCAATCTGTCAATGGGTAATAACCGATAAATCCTGTAGTTATGACGACAGGCAGAGAATCCAATTCAAAAGAGGATTCTTAATATTATTTCTTGTTATTTTTGAAAAGAAAACTAATAAATTTTCTTGGGTAGACAGATAACCACTTTACTACCCTTTGTATAACTTCAGTTGAGCTTGCGGA # Right flank : AGATAAGCTTATTTAATTATTATTAATAATCTTTCTCCTGATTAATTAAAGCAACTAAAACTTTTTTCTTTTTCTAAAACTTGTGCGCAACAAAGAAAAATCAGTCCTAAGTATGAGGCAGCACTAAGCCTTAGTGGTACAATAAGCTAAAGCCACTAGCGGAGGGGAACCGCACTATTTAGTGGTAGAAAAGAGGAAATGAAATGAAGAAAAGTACGCTAACAGTGATTGGGATCATTGGTATTATTGTGGTCGGAATTGTAGGTTATTTCATTGCAACTTACAATAGTTTGGCAACAGCAGAAAATAGTGTTGATGCAAAGTGGTCGCAAGTGGAAAACGTCATGCAACGTCGGGCAGATTTAATCCCGAATTTGGTAAATAGCGTTAAGGGTAGTATGCAACATGAAACGGAAATCTTTTCAGCAATTACGGAAGCGCGAAAAGAATACAATCAAGCCTCCACGCCGTCAGAAAAAGTGGCCGCTAACGATAAAATT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACAAATCTAAAAATAGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //