Array 1 5224055-5224938 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027538.1 Pseudomonas aeruginosa strain AR_0095 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5224055 29 100.0 32 ............................. CGTGCAGTCGGTAAGAATCATCGCGCTGCCGC 5224116 29 100.0 33 ............................. CTTCTATCCGAAACCCAGGTCACGCCAGACAAC 5224178 29 100.0 32 ............................. GCCCCAAAAAGCGTTGGCGTCATCGGCTGGCT 5224239 29 100.0 32 ............................. TCGTAGCCCTCCGGGAGGGATTCGAACTTGTA 5224300 29 100.0 32 ............................. CCTCCGACGTGGAGGTTGAGGCGGATGGCTAC 5224361 29 100.0 32 ............................. TGGAACTTCAGGTCCTTGTTGGTCAGGCGCTT 5224422 29 100.0 32 ............................. CTCCCGTGAGCACTCAGGGCATCCAGTCGGCT 5224483 29 100.0 32 ............................. AAAGCCATCGGGGCACGCATCGTTGCGCCAGC 5224544 29 100.0 32 ............................. GCGATCTGAGCACCTGCGGATGCGTAGATGTA 5224605 29 100.0 32 ............................. TAGGTGTGCTGGGCGTAGTCGGTGGAGTTCTG 5224666 29 100.0 32 ............................. GCCGTGTCGTTCGATGGTGATGTCGTGCTGCT 5224727 29 96.6 32 ...............C............. AGGTATTCCTTGCCCTTGGCCAGGAGCACGCC 5224788 29 100.0 32 ............................. TCATCGATCGTGGCGGCTGCACTGGCTGCCTG 5224849 29 89.7 32 ..............C..........G.T. GTATCGACATCGATGGTGACCAGGCTGGTCCG 5224910 28 79.3 0 A..........A..C..-.....A....T | C [5224914] ========== ====== ====== ====== ============================= ================================= ================== 15 29 97.7 32 GTGTTCCCCACGGGTGTGGGGATGAACCG # Left flank : GGCATCGTTGTACAGGGCGACGAATTCCGCGCCCCAGAACAGCACGATCTGCGCCTTGGCCGGCAGCAGCGTGGCCATCGTTGTCTTCAGGCTCGCCGACCAGGCGTCCGGCGGGCCGAGGGGCGAACTGGCCGCGCCGAGGCTGAGCAACAGTTTCCCGACCGCTCCTCCGTTGGCCAGGAAGGCCGGTGGATGGTCGAGGGTGTTCGGGTCCGGTTCGATGGTGAAAGGCTGTGCCATGTCTGCGGAGTCTTGCTCGGTTCCGGTTGAGGTGGTGGGTCGTATGGAATATAGGAGGGCGGTGGGTGCGCTTGCGTTCAATCAGCTTGGGGGACCGCGGGATCCCGATGCGGGTAGGTTTCGAATGGTCCCGAGGGAGCTGCCGGATTAGGCTGTGGGATGAGTACGGCCCTCATTTCCAGGAGCGGCGCGAGGGCCGCTTGGCCCGGTGGAATTTTGCTGTTGTTTTTCTTTTTTTAAAACAATGGGATACGGTAAGG # Right flank : TGTCTACGCTCCTGCGGTTCGCCCCACCGCGCGGTATTTCCCATGGTGGGGCGAACCGCGCGGCACTACGACCAGTGGCGTGATCACCAGTGTCAGCCGCCAGTTGCCGGAGACGCGGATCGCCCACCGTCCGGCAAGATCCTCTTTCAGGGCATGGAGTTTCCAACCAACCTGGTTCACGTCGCTGGGGATGCAGGCTTCGCTCAGCACGAATAACTGACGGCGCAGGCATTGGGCGGGGGCTGCCTGGATACCTTGCCCTTACCGGTCTCGAAGAAGGCTTCCAGCCCCCTGTGGCGGAAGGAAATAGATTGTGAACAGGCGGCAAGTGAAGGTTGTTAGTGAGTTAGCGGAATGTCCGACGTTCGCTGTTGCACCATGGAGTTCCTGCTAATTTGGACAGGGGTGGTCGGTCCGGTCCATATCCCTCCTGCGCTCCTTCGCTTGCTAAACGGGGGGAGCAGGCGCATCCCTCGCTGGCTGCTCCTTGACGAGCGTCA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGGGTGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGGGTGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 5234111-5236276 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027538.1 Pseudomonas aeruginosa strain AR_0095 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5234111 29 100.0 32 ............................. TTGGCTCGCATCTTGATCGAGGCCGAGCAGGG 5234172 29 100.0 32 ............................. GCGCCGCCGTGGCGGCACAGCGAGCCGCTGCC 5234233 29 100.0 32 ............................. TTTCGTCGTGCGACTCATACACTGGCGCCTCC 5234294 29 100.0 33 ............................. GTAGGTGGTCAGCGCCTGCGTGGTCGTCTGGTT 5234356 29 100.0 32 ............................. ACTTGCCTTGATGACCTCGCGCTTTTCCTGCT 5234417 29 100.0 32 ............................. TCGTAGTCTACGATGAAGCGCGGGTCGGTTTC 5234478 29 100.0 32 ............................. TTGAACAGCAAGGACGCTGTACTCAAGCCCGC 5234539 29 100.0 32 ............................. TTGATGGTGCGGTAGGCTGCTTTGCCCTCCTC 5234600 29 100.0 32 ............................. CACGTTTCGGTCGGCTATCGCGTCCTGCGCGC 5234661 29 100.0 32 ............................. TGTTGGAACCCGCTAGCGCGGGCGAGCAGGCG 5234722 29 100.0 32 ............................. TCTATGGGAGGTGGGGAGTGAACGAGACCGTA 5234783 29 100.0 32 ............................. TTGAGGGCAAACGACGTTTTGCCCATCGAGGG 5234844 29 100.0 32 ............................. GCGTTTCCACGCAGGCAGATGCTCGCCACCAC 5234905 29 100.0 32 ............................. TAACGGCCCGCCCCTTCACGCGACCTCCCGCG 5234966 29 100.0 32 ............................. CCAAGAAAGAACGCCGAAAGGCCGTTAGGAAA 5235027 29 100.0 32 ............................. ACGTTGAGTACGTCGGCGCCGTACTTTTCGTC 5235088 29 100.0 32 ............................. CGGGCCTTGGCAGCGAGCAGGGCCTTCATGCC 5235149 29 96.6 32 .................T........... CGCACTGATGCCAGAGCCGGAGTCGCGACCGG 5235210 29 100.0 32 ............................. GCGCTTCACGGAGACGGCCTGCTGTTCCCTGC 5235271 29 100.0 32 ............................. TTCAGCAGGGCGTCAGGGATGGCATCGTGTCC 5235332 29 100.0 32 ............................. GCTACTGTCGAAGCCGGCACCACTCTGGACGC 5235393 29 100.0 32 ............................. GCCGGATTCCGCTGCCGGGCTACATCATCCCG 5235454 29 100.0 33 ............................. CGGGGCATGACTTCAACCCACCCCCAGCCCTCC 5235516 29 100.0 32 ............................. TCGCACTTCCAGCCATGGCTGGACAAAGCGGC 5235577 29 100.0 32 ............................. GCAGTCAAGGCTGCCGGCGGCCAGTCCGCCCT 5235638 29 100.0 32 ............................. GTGTAGCGGAACCGGGCGGCGCCGCCGGCGAG 5235699 29 100.0 32 ............................. GCCAGCAGGGATGCCAGCACGCAGCCAGTCGC 5235760 29 100.0 32 ............................. CAGTGACGGCAGCAGACGCGGCGATGCTGGAT 5235821 29 100.0 32 ............................. TCGGTAGACGCACAGATGGTCGAGCAACTTCG 5235882 29 100.0 32 ............................. GCGCAGGGCAAAGCCAAGGTCACCGCCGGCAC 5235943 29 96.6 32 ...........A................. TTCGAGGTCAGCGGCTTCGGCCCCGGCGAGCA 5236004 29 96.6 32 ...........A................. CCGGGAATGAACGTTCCCATGTCGGCTACGCC 5236065 29 96.6 32 ...........A................. GTCGCCAGGCCCACGTCGGCGGATCACCAACA 5236126 29 96.6 32 ...........A................. ATGTAGCTGTTACGCGGTCCCGCGGTGCTGAG 5236187 29 96.6 32 ...........A................. GTGATGGAGCGGACCGCCCCGAGCACCGCAGA 5236248 29 93.1 0 ........T..A................. | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.2 32 GTGTTCCCCACGTGCGTGGGGATGAACCG # Left flank : TGACCCGCATCATTCCCACCATCGAAGAGGTACTGGCCGCCGGCGGCGTCGAACCTCCCAGCGCACCGCCCGAGTCGGTGCCGCCAGCCATTCCCAACCCGGAGGGAATCGGCGACCTCGGGCACAGGACGCAAGGGTGAGCTTCCTGGCCGTAGTGGTGGAAAACGTCCCGCCGCGCTTGCGCGGACGTCTGGCAATCTGGCTGCTGGAAGTCCGCGCGGGCGTCTATATCGGCGATGTATCGCGGCGTACCCGGGAAATGATCTGGCAGCAGCTGAGCGAGGGCTACGAGGAGGGCAACGTGGTAATGGCCTGGGCCGCCGCCAACGAATCCGGCTACGAGTTCCAGACCCTGGGCGTTAACCGTCGACATCCAGTGTTGTTCGACGGGCTGCAATTGGTGGCATTCCAGCCTCTGGATCGGACCACGGAATAGAGGATGAGGCGGTAGATTTTTCGAGGTGTTTTTTCTTCTTTAAAAACAATTCTGTACGGTAAGT # Right flank : GTGGAAGTACGCTCGCGCAGCGAGGATGCGATATATGCACGGGGCGAGCCGTTCACTTGAAAAGCCGACATTCCTGGCTGTCCTGTATTTCCCCTTTGGCATGGATAGAGCAGCCCCATAGGGCGAACGACGCCACCGGCGTCATTCGCCATGGCCGGGTCAACCGGAACGTCGAGCGGCTACCAGGCGCTGCTGCAGGCGCGTCAGGAAGGCCACTTCGAAGGCGGTCTTCTGCATCGGTGTGGGCAGGCTGTCGCGGCCGAAGGCGAAGGCGGTCCAGAGCTGGCCTTCGATCTGGTCGGCAAGCCAGTTCTCGGCCTGGCGGACGCCCTTGTCGATGGCGGGCTGGGCGGGAACCGGCCAGAGCAGGGAGAGACCGGGTTGCCGGTCGGCGGGGGGAATCTCGACCATCAGGTCCTTGTAGCGTTCGATGATTGCGTCGACGTGGGTCTTTTCCTTTTCATCCTTCGTCATGCTGGGTACTCCGTTTCTGAGAGTCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCACGTGCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGTGCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //