Array 1 104501-99466 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABEVP010000004.1 Chromohalobacter salexigens strain KG13 NODE_4_length_245156_cov_513.505005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 104500 29 100.0 32 ............................. GGAATAGACGACAAACCAGGGACACCAGAAAC 104439 29 100.0 32 ............................. ACCGCGCCAGGCACGAGACTGACGAAAACGAC 104378 29 100.0 32 ............................. AGAAGATAATTCATTAGTATCAATTTCATGAC 104317 29 96.6 32 ............................A TGTCATAAATTGGTTTCTTCATGCCCGCAAAC 104256 29 100.0 32 ............................. GCTTCGCCGAAAGGCTCGGAAAAAATGATCAT 104195 29 100.0 33 ............................. GCGGGACTTCGTCCCGCTAACCCCCAGCCCGAT 104133 29 100.0 32 ............................. TGGCGCTTGTGCGTGACGCGGCGCGTGAAACC 104072 29 100.0 32 ............................. ACGCCAGCATCGACAGTATCGTGACTGACCCG 104011 29 100.0 32 ............................. ACTACGTGCCGGTCTACTCGGCGATTCGCATT 103950 29 100.0 32 ............................. CAGATTGTGGAGCGCCGGATCTTCATGGCTTC 103889 29 100.0 32 ............................. ACAACTATGCGAGTCGTCAACGCAGTGGAGGG 103828 29 100.0 32 ............................. TCGTATTCCAGCTCCGATACCGCTACAGGGGC 103767 29 100.0 32 ............................. GAGTCGCTTGCTCTCGACGGGCGGCAACCAAC 103706 29 100.0 32 ............................. TTATTGGTATTGAAACCCCCAACAACGTCAGA 103645 29 100.0 32 ............................. CTGCTTGCCGATGGATTCGAGGGCCGGGCAGT 103584 29 100.0 32 ............................. CCACAGCAGACAGGGCGGATGACGAGAGCGAC 103523 29 100.0 32 ............................. CCTCGCGCAGCCTGTCCGCCCTGGCTCCACGC 103462 29 100.0 32 ............................. GCGGGGGTATCCAGGATTTCACCGCCGAAATC 103401 29 100.0 32 ............................. AAATTCGACGTGATGATGGAGACGGTCGCCGA 103340 29 100.0 32 ............................. GCGTACCCCCGTATACGCTGCATGTCCGCACT 103279 29 100.0 32 ............................. ATCGCAACGAAGCACGCAGAGAGGGCCAGCGC 103218 29 96.6 32 ............................C GCCGAGCGCCACCCGTCTTCGCGGAAGTGGCT 103157 29 100.0 32 ............................. CCTGTATTCCTCACCCTGACCACGAAGAACGG 103096 29 100.0 32 ............................. CCATAATCAGACTTCGCTTCAGTCCCGCCGTA 103035 29 100.0 32 ............................. GGCGCGCGAACTGGCTGGCACGCAAGAAGCTC 102974 29 100.0 32 ............................. GTGACAACATTGCCCTTTGCAGGGGCAAAGAA 102913 29 100.0 32 ............................. CCCCGGCGCGAACATCGCTTGCCGCTTACCGA 102852 29 100.0 32 ............................. CGCTCCAGATACTTCTGCATGTACTTGGAGCC 102791 29 100.0 32 ............................. CATCAGTCGCTGGAAGAGTGGTGATCGCCCCA 102730 29 100.0 32 ............................. GCCCCACCGGGAACCGGCAGGGCCTGATACGA 102669 29 100.0 32 ............................. CACAAGGACGGCACGCCGGTGCAGCAGTTGAA 102608 29 100.0 32 ............................. CATGTTTCCAGGCAGCGAAAAGGGAGGATTTA 102547 29 100.0 32 ............................. TAACCGTCCATCCCGGATTCACGACGACGGAA 102486 29 100.0 32 ............................. GACGCCTCAGGCCGACAGGTCACATTGAGCTG 102425 29 100.0 32 ............................. CCGAATCCAGCAAGTCGAGCAGATCAAGTCAC 102364 29 100.0 32 ............................. ACTGTGGTGCCGCGAGGCGAGCGAGCAGGGCG 102303 29 100.0 32 ............................. TCGCCGTACTGCTGAGTGGCCTGAAGGCTGGC 102242 29 100.0 32 ............................. TCGCTGCCCTCCCAGCCCGAGCACTGGCCGTA 102181 29 100.0 32 ............................. GACACCTACTGGTTCTTCCGCCTCGGCGACCA 102120 29 100.0 32 ............................. ACCTTAGACCCGTCGCGGGTAACGGCTTCCCA 102059 29 100.0 32 ............................. CAGTTCAAAATCGACTACTCTGGCGAGTTCAG 101998 29 100.0 32 ............................. TCAGCCATTGAGGCTCGTCAGCAGGATCGCGC 101937 29 100.0 32 ............................. CGCCTGCGCTATGACAGCGACGAATTCGACCC 101876 29 100.0 32 ............................. TGCGCGAACTGGCCGACCAGGAGGCAGGCTAT 101815 29 100.0 32 ............................. CACGCGGCGCCCGGCTGGCCCGCGAGTGGATC 101754 29 100.0 33 ............................. TCGATCACCTGACTGAAGTTGAGCGCCTGTACC 101692 29 100.0 32 ............................. TCACGCAGCTCTTTGCCGCCGAGCTGCTGCTG 101631 29 100.0 32 ............................. ATCCAGCACGGCGACAACGAGACGCCCTGGAT 101570 29 100.0 32 ............................. GTGGTCGCGGCGGTCCGCACGCTCGATCCTGA 101509 29 100.0 32 ............................. CGCGTCTCGCCCGTGAGATGAAAGAAGCGGAG 101448 29 100.0 32 ............................. CGCATCGACATCGTCAATGCGAAGCCGCGCCC 101387 29 100.0 32 ............................. CCGCGAAAACGGAGACCGTGGAGGTCGGCGAG 101326 29 100.0 32 ............................. ATCTCTATGTGCTGGCCCGTCGAGGCCAGGTG 101265 29 100.0 32 ............................. TACGTCCAGCGTTACACCGAGCGCCTTCAGGT 101204 29 96.6 32 ............................C GGGTGGGTGTGTCGCGCTCGGCTCTCGTTACT 101143 29 100.0 32 ............................. TATTTGGTTGTCAGGTCGGGCTCGTATGTGCC 101082 29 100.0 32 ............................. CGTTTTGCCAGAGCCTAATTTACCCGTTACAA 101021 29 100.0 32 ............................. GCTGAAAAATACGCACCACTGGGGCTTCTAAC 100960 29 100.0 32 ............................. GTACGAGGTGACTGTGCGCAAAGATTATGGGG 100899 29 100.0 32 ............................. TCGTAAAACCACTCGAAGCCTGAAAACCAAGG 100838 29 100.0 33 ............................. ATATCGTAGGGGCCGAGCATCTTGATCGAGTAC 100776 29 100.0 32 ............................. CATGCGGTAGGCGGTGTCCGGCTTATCGGTCA 100715 29 100.0 32 ............................. GACGACCTCTTCTCTGGGCTCCCGCATGGCGG 100654 29 100.0 32 ............................. CACCACGCCTGACACCCACCCCATGCCTGGCC 100593 29 100.0 32 ............................. GAACAATAGTAGGAGGATTACCAGGAACAATA 100532 29 100.0 32 ............................. TAGATAAACTTGAAAGAATGGCAGAGAGTGTC 100471 29 100.0 32 ............................. CCATTACGCATAGATGTTTTTAATCCATTTAT 100410 29 100.0 32 ............................. CGCTCCTGTGCGCCCTGCGCTGACTCCTGGGT 100349 29 100.0 32 ............................. CGAATGTGCGCTGCTCTGGTGCTTCGAGTGGC 100288 29 100.0 32 ............................. GGATGGCTTGTATGAAACAACGCACTGAAGAT 100227 29 100.0 32 ............................. ATCGTGGTTAGCTTTGCTGATACGTCTCAGGG 100166 29 100.0 32 ............................. CCTATTTCGGCGCTACTAGCGACGAAGCCGCC 100105 29 100.0 32 ............................. TTTCCACCGCTGGGATGGAATTGATACGCCCC 100044 29 100.0 32 ............................. CGTGGCTCTCTAGCTGGGTCGACGAATTGGAC 99983 29 100.0 32 ............................. CGTTTATCGTTGCAGAGCATCGCGGCGCGGCG 99922 29 100.0 32 ............................. AACATCACCAAGCCGGCGCACTTCACCTGGAA 99861 29 100.0 32 ............................. ATGCATAGCGCTGGCTTCGAGGGACGCTTCTA 99800 29 100.0 33 ............................. CATGGCCATGCCGGTACCGTCGGGTTGAGGCTC 99738 29 100.0 32 ............................. CTTCTGGATGCGGCTGACAGCTGATTGGGGAA 99677 29 100.0 32 ............................. AAAGTGGTACACCCTTTTCAGAGAGGTGCCGA 99616 29 100.0 32 ............................. AGCATCAGGCGCTCCCATTCGGTGCCGAGCTG 99555 29 100.0 32 ............................. GCATCGAGCAGGCCCTGGGCCGGCCTGTTGAC 99494 29 96.6 0 .....T....................... | ========== ====== ====== ====== ============================= ================================= ================== 83 29 99.8 32 GAGTTCCCCACGCCCGTGGGGATGAACCG # Left flank : AGATCGAGCCGCCACTTCCGCCGCCGGATGCGGTCCCGCCGGCGATTCCGGAGCCGGAATCCGTCGGCGATGCCGGGCATCGGAGTCAATGATATGGCAATGCTGGTAGTCGTGACCGAAGCCGTTCCTCCTAGGCTTAGAGGCCGATTGGCTGTTTGGTTGCTGGAAATCAGGGCGGGGGTTTACGTCGGCGATGTCAGTAAACGCATTCGCGAAATGATATGGGAACAGATAGAAGCCCTGGCCGAGGAAGGCGGCAACGTTGCCATGGCCTGGGCCAGCAATCACGAATCCGGCTTCGAGTTCCAAACCTATGGCGACAACCGTCGCGTCCCCATCGATCATGATGGATTGAGGCTGGTGCGGTTTTTACCGCCTCAAGATAATTGACTGATTTTAAAGGCTCTTTAATAATTTGGAGCGATTAAATTTTAAGCAAAATCGCTGGTGGAAATTTCCCCGGAGATTTTGTTCTTTATAAACAAGCGTCTATGATTAGA # Right flank : CTCGCGCAGATGTTTGGCACGTTCGTGCGCAACCGTTCCCCGCAGACGCGGGGATATAGTGCTGGGTTAGCTGCCGCCCAGGCAGCTCAGAAACAGCTCGCCAGCCAGTAACATGCCGCCTACGGGTTAGCGCTACCCCGCGACCTTGCGTCTTATATCGACCCGAGCGGTCGCGTGTCCGAAGTATTGAATCGCAGGCGCAAGCTCAGCCTGCGCCTGATTTCGGTGGCTTTACGATGGGTTCAAGATGCCTTACGAGAGCCTGATGAACGAGACGGCCGCCTGAAGTATCACTCTGCTTCTGCCAGCACTTCCTTCAATCGGTCGGGGAAGTTGGTGAAGAGGCCATCGGCGCCCCAGTCGAGCAGTTGGCGCATCCGGTCTTTGTCGTTGATGGTGTAGACGTGCACCAGAAGGTCGTTGGCGTGGGCCTGCTCGATGAAGCGGGCGTCGATGACCGGTTGACCTTCGTAGAGGTAGTTGGGGCCGACGCCATCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCACGCCCGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 118890-115445 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABEVP010000004.1 Chromohalobacter salexigens strain KG13 NODE_4_length_245156_cov_513.505005, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 118889 29 100.0 32 ............................. TCAATCCAGCGCTGCCCGCCTGGAGCGTTTGC 118828 29 96.6 32 ............................A AGTTGCTGCTCAGCTTGAAGCCGAAAAGTCGC 118767 29 100.0 32 ............................. TGGACTGAAACAATCGACCAATAAAGGGAATA 118706 29 100.0 32 ............................. AACTTAGAATATGATAGCGAGGTAGGAGAGGT 118645 29 100.0 32 ............................. CCCGCGCAGACGTCCGCCGCCTGGCCGAAACC 118584 29 100.0 32 ............................. GCAGGGGAGCGTGTCCTACTCGTTGACGCGGA 118523 29 100.0 32 ............................. ACTCGACCCCGGCGCCGGGCTGGTTTTCGTTG 118462 29 100.0 32 ............................. TGAAAGACGAAGCACGCATTCGGTAAAGTGGA 118401 29 100.0 32 ............................. GCCATAAATGGCGATACGGGCGCATGCTGGGC 118340 29 100.0 32 ............................. TGATGGTCTACGTCCGACTGACCGCCGAGCAG 118279 29 100.0 32 ............................. CTGAGCGGCCTTGTTCGCCGCCGGAAAGCAGA 118218 29 100.0 32 ............................. GCAAGTACACCCGCGCCCCAGCACCATCCCAG 118157 29 100.0 32 ............................. CGCCGAGCGTGGCCATCGCACCGAACTCGGGC 118096 29 100.0 32 ............................. CCAGGGAGCGTGGCGAAGAGACAAGCAATAAG 118035 29 100.0 32 ............................. ATGGCATCACAGACGTGCCCAAGGAAGGCACA 117974 29 100.0 32 ............................. GCGAGCACGCAAATCGCTACTGCCACGCTTGC 117913 29 100.0 32 ............................. CATTCGATGCCCTTGCGGCAGCCCAGCAGCGT 117852 29 100.0 32 ............................. CTTCCATGGCCGACTTCGGCTTCGGCCAGCTG 117791 29 100.0 32 ............................. GTGGTTAGCAGCTGCTGGGGCTGCGTGACCAC 117730 29 100.0 32 ............................. CAATGTTAGTGTTTATATAAGTTTCCCTGATG 117669 29 100.0 32 ............................. GGACTGTCGACGCTGGCCGCTTCGCCGGTAAC 117608 29 100.0 32 ............................. TAATACGCGCATTTTCAGACCCCGCAATGATA 117547 29 100.0 32 ............................. GCGATCCGCGAGGCGGACGAGAACGGCATGGA 117486 29 100.0 32 ............................. GGCGCCAGGCCGCCGCCAATGCCGCCGCCGAG 117425 29 100.0 32 ............................. GCCAGCGTCAGCCCCTCGCGCTGCATTGTAGC 117364 29 100.0 32 ............................. CCGCCCATGTCCTCTTCCGCGACATCGCCGCC 117303 29 100.0 32 ............................. CTCACGCCCAACGGCGACTACTCGCTGAAAGG 117242 29 100.0 32 ............................. TCCTCTGGCTCATAGGCTTCCATGAGATTATC 117181 29 100.0 32 ............................. CCTCAACGCGGTGCTCGCCGGCCTCGAAAAAC 117120 29 100.0 32 ............................. GCCGGGCTGAGTGCCGACCTGATCGCCGAACA 117059 29 100.0 32 ............................. GCAGCGGTCATTGTTACCGTGAAGAATTTGCA 116998 29 100.0 32 ............................. CGAGGGCACGATTATTGGCTGGGCCTGCTGCG 116937 29 100.0 32 ............................. TTCAGCGAGGCGTCAACGTCTCGCGTGATAAC 116876 29 100.0 32 ............................. CAGCGTGGCGGGCTGCGTTTTTTCACGACACT 116815 29 100.0 32 ............................. GCCGGGACCAGGGCAAGACGTTCTTCATCACC 116754 29 100.0 32 ............................. GACTGTCAACGTCCGCCGCTTCACCAGTAACT 116693 29 100.0 32 ............................. TCATATCCGAAAGAATGGCCAAGTCACGGCGG 116632 29 100.0 32 ............................. TAATGCACCACACCATCCTCGCCATGCTCCCA 116571 29 100.0 32 ............................. AACCCTGACAGGGGGCCCCAATAGCGATAGAC 116510 29 100.0 32 ............................. CCCGACATCTTCGAGGCAACCTACGAGTCAGT 116449 29 96.6 32 ............G................ CACTTCACTGCCAGTTACTCGGCGAGCCGTGC 116388 29 96.6 32 ............G................ ACATACGCCCCGTCGGGACCAGCCACCGACAA 116327 29 96.6 32 ............G................ CGAGCCGCCACGTCTCTTGATCGTGAGGTTCG 116266 29 96.6 32 ............G................ GGCGTAGCTCAGGCCGTACATGGCCACCGGGT 116205 29 96.6 32 ............G................ CGCCGTCTCCGCCGAGCGCGAGGTGCTCAATG 116144 29 96.6 32 ............G................ ACGAGCTCAAGAAGCTCAACCGCACAGCGAAA 116083 29 100.0 32 ............................. CGTCAGAAGCAGCCGAGGCTGGCCATGCAGCT 116022 29 100.0 32 ............................. TTGCACGAAGTGGCTGTATGGCTCGTCCCAGC 115961 29 100.0 32 ............................. TGCCAGAACTTGCGGTCGGGCAGCAGCTCGCC 115900 29 100.0 32 ............................. GCGCGCTCGAAGGCCCGCTCCAGGGGCGTGGC 115839 29 96.6 32 ............G................ GACTCGAAATCGAAACCGAAAAACGCGCGAAT 115778 29 100.0 32 ............................. CACGACGCCAAGACCGACAAGGGATTCGCGGA 115717 29 96.6 32 ............G................ GCTCAAAGGCGATTGGCACCATCGACGGGGGG 115656 29 96.6 32 ............G................ AGCGTGAGCTTGCCGCCGCGCCCCACGTACAG 115595 29 93.1 32 ............GG............... TTATTCAGCTATCGGTGCAACTGCAATACGCC 115534 29 93.1 32 ............GG............... TGTTGCGTTATTGCAGTAAAGACCCTGAACCC 115473 29 93.1 0 ............GG............... | ========== ====== ====== ====== ============================= ================================ ================== 57 29 99.0 32 CCGTTCCCCGCACACGCGGGGATGAACCG # Left flank : TGGGCTACACCCGCGATCAGGTGATCGGCGACATCCTCGACCAGTACGAACTGCACATGCAGTTCCTGCACCTCAACCGGATAGAGCCGGGCAACATCAACATGCCCGACAGCCCGGAACAGCCGCCTTCATAAGGCGTGCTCGGTCGGTCGCCACCGTTAGGCGGCCGGTCTTCTTAAAAAGCTTGAGCCCCCGGTCGCGATGCGGCCGGGGGTTTTTGCGTGGGAGGGGCGAGTAATACCAAAGGCTGCGAATCGTCAGAACGCAACCTTCTTCAGAGGATGGTAACGTAATCGTCGCAGGCAACAGGTGCGATCCGTCAGTGCATGAGCGGGTCGACGTGGCCTGCGAACGGCGTTGGTGCGCTATTTGCGGCTCTTCGCCAACTGGTTGATTTATATAGATCTTTAACAAATCGAGCTGATCAAAAATTAAGCAATATCGCTGGTGGAAATATTCCAAGCGATTTTGTCTTTTATAAACAAGTGTCTATGATTAGA # Right flank : TAAGCGCAAAATAGTCGGTGGGGTTCAGGGTAGGGTGCGTTAGGCGTCGTCTTCTGGTGGCTGGCTACCTGTGCGTTGCTTTTCCAGAATGCGAGGAGCAACGAATATCGCGACCATGCCAACGAGATCCAGCGTTCCGATGACGCCCGCAGCAACAGAACTGAAGGGTGTGATCACGGTGGCTGCCACGAGGCCGACGATGGCAATTGTCAACCCGTATCGTTGTCCACGTTCATCTTTCTTGATGACACCCTCTAGACCCTTGCGACGCATGTCGTGCGTATGGTGCTGCTCGTCGACGGCCATATTCACGATGAGGCGACGTGTTTCCTCATCATAGGCATTCAGTTGCTCGGGAGGCGGGGAGGGCCTTGATGGCTCACCTGCCGCATCATGGCGACAGATTGGTTTTGTGGCTCAGGGGCGGAGGCACTGACGATCAGATCGCCTAACCGTACCTGCTCTTCCTCGGAAAGCTGTCCATGATGCAACTGCTCAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //