Array 1 659698-658606 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICN01000001.1 Sinimarinibacterium flocculans strain DSM 104150 Ga0215726_101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 659697 36 100.0 30 .................................... CGCTGGGGATCGCGGATCATCGCCGGCACG 659631 36 100.0 30 .................................... CGTCGGCGTGGGAGCGCCACTCTTACGGGG 659565 36 100.0 30 .................................... CTGTTCTGCATCGTCGAGATGGCGAGGAAC 659499 36 100.0 30 .................................... TGTTGGGCCGTGAACAACAACGTGCTGGTA 659433 36 100.0 30 .................................... TCAAATGACTCGTGGGACATCGGGACTGCT 659367 36 100.0 30 .................................... GGATCGTTCGCCGTCGTGCGCGCGCGACTG 659301 36 100.0 30 .................................... CTCGTCACCGGCGACGTCATCTACCCGCAC 659235 36 100.0 30 .................................... TCGCCGATCCCTCATCCGAGAGCCCGTGGT 659169 36 100.0 30 .................................... ATGCTGTGGAGCAAGGGGTCGCCGTTGTCG 659103 36 100.0 30 .................................... ACGATGTGGGTGACACCGTCGACGACGAGG 659037 36 100.0 30 .................................... ATCTCGGGGATGGGCAATTGCTCGCCGTGG 658971 36 100.0 30 .................................... CACCGCGGCATCGAGGTCATCAACTGCTCG 658905 36 100.0 30 .................................... TGATCGGCTGATGAGCGTGGAGGCGGAGAG 658839 36 100.0 30 .................................... GTTGAGGACGTGGGTGTAGATCATGGTGGT 658773 36 100.0 30 .................................... TACAGATCGCTGAGCATGTCCGCCTCGTCC 658707 36 100.0 30 .................................... ACCGCTACCGATAGTCTGCGCGACACCGAC 658641 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 AGCGTAACCGATTGGGAATTGCGCTCAGGCCGGAAC # Left flank : TCTCGCTGGCCCAGGTTTTCGCGGGGGAGCGGGACAAGCTGGACTTCGCACTGCCGCTGCGTCCGCTGCTCTTCACTGAGAGCGGCAGTAGCGCCTTCTGATGCTGACCGGCTACCGGCTGATGTGGATGCTGGTGATGTTCGACCTACCCGTGGTCGAAGACAAGGAGCGCAAGGCGGCGACCGCATTCCGCAAGGCGCTGCTCGATCAAGGCTTCGAGATGGCGCAGTTTTCGGTATATCTGCGCCATTGCACCGGCCCCGAGCAGGCTGACACCTTGACCAAGCGCGTCGAGTCGGAACTACCCGACGGCGGCAAGGTGGACATCCTCTATTTCACCGACAAACAATACGAACGCATTGCCACCTTCGTCGGCAAGAAGCGAGCTAGCGCGAGAAAAAATCCAGACCAGTTCAACTTGTTCTAGCCCATGCGAACTCCGCTTTGTTGCGCCACATATAACAGAAAACCCTGATACTTCATGGGGTTCTGTTACACGC # Right flank : GTCAGTGCAACACTGACCATTCCCGCTCTCACCCCGATGCCGACGCTTACGGACGCTAACGTCCTGACCGATGTGTTCCAGCTGCTCGTGAGACCTCAGCTGGAGAGCTAGCCCGCAATCATCTCCGAGGCAGAGGCGCGCATACACCGGATCGGTCGAAAAGCGCACAGGCACTGCCGAGGTGGATCTGCCGCAAGCAACCGGTGTTCACTGGCTGGAGCTGGCACGCCAGCGACGCTGAGCAGCCCGGAGGCGATGGTAGCGGGGGACGAATGAACCGAGGCAGAACATCAGCGGCTACAGTTGGAGAAGCTGAGGCTTGAGATCGAGTCCCTGAAGAAAATTCAGCGACGGTCTGTGCGACGGCCTTAGTTGATGGGCTCCCTGAGATCCAATCGACTCTCTCGTTACTCATCAATGCCTAGTGCCGGCAGTTTGGCGATGCCACGAGCAACTTCAGACGGAAGCAGGTGTGCGTAGTGGCGCCGAGTAATACGACT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCGTAACCGATTGGGAATTGCGCTCAGGCCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.01 Confidence: HIGH] # Array family : NA // Array 1 209342-203963 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICN01000005.1 Sinimarinibacterium flocculans strain DSM 104150 Ga0215726_105, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 209341 32 100.0 34 ................................ TGGTGCCCTAGCGTCCAGGTGGCGCTCACGCCGG 209275 32 100.0 35 ................................ TTTGACCCCGGCACCAACGCGGGGGCGGTGCTCGC 209208 32 100.0 34 ................................ ACCGCTTGCGCGGCGAGGCTGCACGAGGAGGGCC 209142 32 100.0 34 ................................ TAAATCGACATCGCGAAGTCGATTGGAAAATACA 209076 32 100.0 35 ................................ TTCAGCGACTTGGACAACAGCCACGCGCGCCCTTT 209009 32 100.0 35 ................................ GTCGACGGTGCAGCGTACTGCGCACTGGCGGGCGA 208942 32 100.0 37 ................................ CGTGAAGGCTGCCGCTGCCGGGGGCGCGGCGCCGCCG 208873 32 100.0 35 ................................ GCCAGCGACGAGCAGAAGGCGAACCGCATCGCCGA 208806 32 100.0 35 ................................ GGCATCGGCGGGCAGAAGATCACGGAGTACGAGTA 208739 32 100.0 35 ................................ TGTACGACCAGTGGGCCGCGCGCAACCGCTACACG 208672 32 100.0 34 ................................ GACAGCGCCACCGCCGTGCTCGTGCCCGCCACGG 208606 32 100.0 36 ................................ TCCAATTCAGGTTGTTTTTTGCTCAGAACCGCACCA 208538 32 100.0 34 ................................ ATATGTGCATCCGCATGTAACTTGCGAACTTCTT 208472 32 100.0 35 ................................ TCGGCTGCCGCGCGCGCGTAGAACGGGAACGTCGT 208405 32 100.0 35 ................................ GTTCGCAGCAACAGCGAGATCGACGACGACAGGAC 208338 32 100.0 34 ................................ GATCTCGTCGACAGGCTGATCGAGCAGCACTCCA 208272 32 100.0 34 ................................ GGCTCTAACCCGGACGAGTACCGGGAATATATGC 208206 32 100.0 35 ................................ GCTCCTCGATCTGCATCAGGACACGCAGCATCTGC 208139 32 100.0 34 ................................ TCCGGCTGGTCGGCATACAGGCGGATGCCGGAGG 208073 32 100.0 35 ................................ AGTCCGTGGCCGGCGTGCTGGATATCCTCATCTAC 208006 32 100.0 35 ................................ TTTTCGTCGTTAAAGAACATCAGCGCCGGCCCTTT 207939 32 100.0 35 ................................ CCTGTCGCGCGGCGGCAGTTCGCGGAGGCGTTAAC 207872 32 100.0 36 ................................ CGCACCGACAGCGCCGAGGCCGACACCGACCGCCGG 207804 32 100.0 35 ................................ TGGATCAGCAGGGATTTCCTCGCCGGGTTGTATGC 207737 32 100.0 34 ................................ CACCGTCTCGGCGATGTCGCGCACCACGTGCGCG 207671 32 100.0 34 ................................ GAGGCATCTGGCGGCGTCGCCTGCCATGCGTCAG 207605 32 100.0 35 ................................ CTGTACCGCTGCGTTGATTTGCTGCGCCTGCGTGC 207538 32 100.0 34 ................................ CCGAGCGTGGAGTATTCCGAGCCGCCGGACGAGA 207472 32 100.0 35 ................................ GTCAGCTGGATTGGATTGACGATGATCATGCGGCG 207405 32 100.0 35 ................................ CTGCTGCGCGGCGGCCTGCGCGGCGGTGGCCGCGT 207338 32 100.0 34 ................................ TGATTCACGTGTGTATCCCAGTCGTCGTCAGACG 207272 32 100.0 36 ................................ CACAGCGTGACGATCGCGCGACCGCCGTAAGCATAC 207204 32 100.0 35 ................................ GCCGTCGATCTGGCGTGCTGCTGTGGCTAGCACCG 207137 32 100.0 36 ................................ ACCACATGCACGAACTGCGACATCGTCTTGTTGAGG 207069 32 96.9 34 ..............................G. TATATCGAGCTGGATACCGAGGAAGACCCGGCGT 207003 32 100.0 36 ................................ CACGCTTCCGCAGTGAACAGGTAGACGCCTGCACGT 206935 32 100.0 34 ................................ CAGCCAGTTCAGTCAGGGCGTCGGCAACGCGCAG 206869 32 100.0 34 ................................ GACAACCTGGAGCGTGGGGCCGAGACGGCGGTGG 206803 32 100.0 34 ................................ AGTGAGAACGCAATCCAGCGCGCGATTGAGGCCA 206737 32 100.0 33 ................................ CTCTTCGGCACGCTGCGCCTCGTCGGCCGCCTT 206672 32 100.0 35 ................................ CATTTCTGAGGCCCGAGCATGGCAACTGACATCGC 206605 32 100.0 35 ................................ CGCCCGGTCATCGGTCTTCGATGCCGTGGTCGGTC 206538 32 100.0 33 ................................ GGATGCGGCGCATCAGCTGATCCGGCGGCACCT 206473 32 100.0 35 ................................ TGCTCCATGAGCAGGGCGATGAGGTCGGCGCGCTC 206406 32 100.0 34 ................................ CACCTCGATGGTCGGAACCTGACCCTGCCAGCGC 206340 32 100.0 34 ................................ TGCCCACCGATGCCGAACAGCCCGCCTTCCGTGC 206274 32 100.0 35 ................................ GTCCACGAACTCCAAGCCCGTCTCGTCACCTTTGA 206207 32 100.0 34 ................................ TGCTCACCCACCGTCGAGCGGCCGGCCGCCTGCG 206141 32 100.0 36 ................................ TACTCACGAGTCCGCAGGAATCGAACAACTGCAACT 206073 32 100.0 34 ................................ GTCGCCGTCGACATCGGCACGGCTAGCGCCGCGC 206007 32 100.0 35 ................................ CCTTTCGCAGATTGAGGTATGGTCAAGCGGCGGAC 205940 32 100.0 37 ................................ CCGCAACCACCGCGTCAGCGCCTTGTCGTGGTTCGAC 205871 32 100.0 36 ................................ TACTGCGGTAGTTCAGCGTTTCCCATGTGCTCTTCC 205803 32 100.0 35 ................................ ACGACGCGCACACCGTCCCGCTCCAGATGCCGAGC 205736 32 100.0 34 ................................ AATCGGATTCATGAGAACACCTTATAGCCACCGC 205670 32 100.0 35 ................................ CCGACCTGCATCTGCTCGAGTGCTACTGGGAAGAA 205603 32 100.0 35 ................................ GCCGCACCGTCAGAGTCGGCGAACGTCGCGATGCG 205536 32 100.0 36 ................................ TCCGGCCCCTTCGCGCGCTACGACACCGGCGCAAAG 205468 32 100.0 36 ................................ TGTAATCCAAGGAATCCCCATTGCTGAACTTTTCCA 205400 32 100.0 36 ................................ ACCTTGTCCAGCTAGCGTGCTAATTGCGCGCCGCAT 205332 32 100.0 36 ................................ CGCTGGCAATACCTCTTCGCCAGCCCCAACTACAGC 205264 32 100.0 34 ................................ ACGGGCGCCACGTCGACGCGGGGCGCGGCGATGA 205198 32 100.0 36 ................................ TCGATCTTGTCGGCCGCCCAGGTGATGGACAGCCAC 205130 32 100.0 35 ................................ GGGTCGCGGCCCATGTTGATCGTCGGGCCGCTGGA 205063 32 100.0 35 ................................ GATACAGGCGCGCAAGAGTCGCGGACGCTGCATAT 204996 32 100.0 34 ................................ CCCGCGAGGCGTACCGCGACGAGGCCGCGCGGGT 204930 32 100.0 35 ................................ TGCTCTTCCTCGGTCAGCAGCAGCAGCGTCTGGCG 204863 32 100.0 35 ................................ ACGCTGAGCAACCCCAGTTCCAGCGGCCGGCAGAC 204796 32 100.0 34 ................................ TGCAGGTCGGTGACGTGGAACGGCGTCAGAAAGC 204730 32 100.0 35 ................................ ACGACAAGGACCTGCCCAAGTACTGGAAGCGGTCC 204663 32 100.0 35 ................................ TGGGACGTGTGCGAGCAGGCGCTGCTCGGCCTGGT 204596 32 100.0 33 ................................ CAGTCCTGGCCGGTCATGCACCCGACTCCGGGA 204531 32 100.0 35 ................................ CTGTACCGCCACGTGTTGCAGATCGAGCTGCCCTG 204464 32 100.0 36 ................................ ATCACCTCGAATGGAGCGGAGAACGGAACCGTGCTA 204396 32 100.0 37 ................................ TTCGCGCACCTCGCACACGATCAGAGATACATCCCCC 204327 32 100.0 35 ................................ GTGCGGTTGTACATCGCGCGCAGGTACTTCGCCGC 204260 32 100.0 34 ................................ CCCTGCGGCTACATCAAGCGGCCGGGCGGTACGT 204194 32 100.0 35 ................................ GCAGCATCACGGCGCTGCAGCCGGTCACCGGACCG 204127 32 100.0 35 ................................ AACCGCAAGCCGAGAACGCAAACATGCAAATCCAG 204060 32 100.0 35 ................................ CACGCCGAGCGTGCAATCAGCGATTCAGCCCGCGT 203993 31 90.6 0 ...........................-..TG | ========== ====== ====== ====== ================================ ===================================== ================== 81 32 99.8 35 GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC # Left flank : CGCCATTTCTCTGGAAGTAGGGGGTGAGTCGATGATGGTTCTTGTCAGCTACGACGTCACGACGGTGGATGCAGCTGGTCGTCGTCGATTGCGGCAGGTTGCGAAGGCATGTCGGGATTATGGGCAGAGAGTGCAGTTTTCCGTCTTTGAGATCGAGGTGGAGCCGGCTCAGTGGGCTGTGCTCAAGCAGCGGCTGATCGGCTTGATCGATCCTGATTCCGACAGCCTGCGCTTCTACTTCATGGGCTCCAACTGGCAGCGAAAGGTTGAGCATGTGGGGGCGAAGCCGTCCGTTGATCTGAATGGCCCGTTGATCGTTTGAAGGTGCGAACCTCTAGCGCTCGGCCAGCTGCGGGCGGGTTCGCAGTTCTTTAACAATTTGATTGCTATGCGATAAGTGCCGATCACGTCGGAGGGCAATGAGGTGATCGGCCGCTAGGCGGTTGGTTCGCGGAAAGGCATGTTTGCGGCTTGGTCGGTCAAGAAGTTAGATGCGCAGC # Right flank : GAGCGACGAAGTATCTACGATGCCTGGGCTTCGGTTAGGGGTTGCTTGCTCGGCGCACCTGACTCGCGAGGCGCTGCTACAGGGTTAGACACTCTGGTGTTGCGTCGGCCTATGAGGGAGTCTCAGCGAAGGCAGGGGCGTCGAACTGCTCGGGTGAATCGAGTTGGGTTCCTGGGGTTGATGGCGGTCAACGGCGCGCCCGTGGCCAACTACGGGCCGGAGGAGCTGGAGCGGGACCGTGCCAAGTTCGGCCACCAGGGCGTTGTCGTCGATGCCGGGTCGCTGATCGCGCCTGTGGAGAGCGGTCCGAAATACTTAGAAGGCTTTAATACTTAGAAGGCCTTGATTGAGCTTCTTGTAGCACTTCCTGTGGGACGAGGCCCCATATGCCGCACGCTATGTGTGCGCGGTCGGTTCCCTCGGGGTGGGGGTTCTTTGTGAACGGCGGGCAGCGCTGACGGGGCTAGGGCCATACAGAGCATCAGGCGTGCAAGGTCCTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCTCGCGGGCGCGTGGATCGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //