Array 1 2038-362 **** Predicted by CRISPRDetect 2.4 *** >NZ_FODE01000030.1 Paracoccus alcaliphilus strain DSM 8512, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2037 29 100.0 32 ............................. CGCACCGGCGCATTCGAGAACCTTCTGATCGA 1976 29 100.0 32 ............................. TCGAAGAACGGCGGGGTCATCATTTTCGCGGA 1915 29 100.0 32 ............................. CGTCATGCCAGCGGTGATGTTGTTCAGCGCCG 1854 29 100.0 32 ............................. GCGGTTGGGCCAATGTCCTATTGCAGGACGTG 1793 29 100.0 32 ............................. GCTGAACTGCTGGCCGAACTCAACCCCACGAA 1732 29 100.0 32 ............................. GCTGAACTGCTGGCCGAACTCAACCCCACGAA 1671 29 100.0 32 ............................. CGGCTGAACCGCCCGGCAGGTAAAGACGCGCC 1610 29 100.0 32 ............................. GCCGCCAATGACAACCGGCAGCTCAGCAGGGA 1549 29 100.0 32 ............................. CAGCTGATCCCGTTGCGCGACCAGCGCGATAC 1488 29 100.0 32 ............................. GCGGCGGGGCGACTGTTCGCCCAGGGCATGAT 1427 29 100.0 32 ............................. CTTGGCGGCGTAATCGTAATCGCGGAGGTCGC 1366 29 100.0 32 ............................. AAGATGTGCGGCCTCCACCTAAGCGCGCCCCC 1305 29 100.0 32 ............................. GCCACGCTTAGCGGCCCTTCGGATCGCCATAA 1244 29 96.6 32 ............................T CCGCAGCGGTCGCATTGAGCGATCCATCAGCA 1183 29 100.0 32 ............................. ACTACCCAACTGAAACAGGTTCTGTGAACTAC 1122 29 100.0 32 ............................. CTGTAGCATGTTATCTTCTGGAACTTCACCCT 1061 29 100.0 32 ............................. TTCACAACTGATGGGTCAGACATAACCTCCTT 1000 29 100.0 32 ............................. AACATCCACCGGCACAAAGCGGCTGGTGGTGA 939 29 100.0 32 ............................. GAAACTGCCATGACTGACGCACCCGCGCCGGA 878 29 100.0 32 ............................. CTGGAAGTGCGCCGTTATCCAGCGCCGTGGTC 817 29 100.0 32 ............................. TCTTGAGATATGGTCCATGATACGCACCTCGG 756 29 100.0 32 ............................. TACCAGCGCGCGCTGGCCTACGGGCTGGCGCT 695 29 100.0 32 ............................. CCCTGTGTGTAGCTGAGCACGAGCATCTTATC 634 29 100.0 32 ............................. TCACACGACCCCGGAGCCGACGTCCCCGCCCA 573 29 100.0 32 ............................. CAGGCCGCTGTTCCGATCTCGCTGTCGATGAC 512 29 100.0 32 ............................. GCGGTCGCTGCCGACAGTAAGGCCGAGGAAGC 451 29 100.0 32 ............................. TCAGCACGGGCCAGCACAACGATTTTTTCACT 390 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 28 29 99.9 32 CTGTTCCCCGCATGCGCGGGGATGAACCG # Left flank : GCGGCGGTCGAGATCGTCACCCCCGACCGCAGTTTCTCGCCCGAGGTGATGGCGATGAATCTGGTTCCCTATATGCGCAACCTGCAACAGCGCGACACGACCTTCACCGTGACGTGGCGGCTGATGTCGGTGGCGCGCGAAGGCAACATGCTGCGCGCGACATTGGGCAGCGATTACGGAGACTTCAGCCGCGACCGGATCGTCGATCAGGTGGTGGTCAACCACGGCACAAGGCCGCTGGATGATCTCTATTTCGAGCTGAGGCCGCTGTCGTCGAACTTGGGCGAGGTCGATTACGACGCGCTGATCGCGGGGACGGCGCAGGGGCTGCGCCCCAATCCCGAAGCCCGGTTCCGCCTGTTCCGCATCGGCGACGCCATCGCCGCCCGCAACACCCACGCCGCGATCTATGACGCATTGCGGCTGGTGAAGGATCTGTAACGTCGAGTGTGGTCGCGAGATGAACCGGCGTCGAGCGCCGCCTTTTCGACGGGCGGCTG # Right flank : GATGCCCGCCAGCGCGCAAAATAGAGCCGCTGGCTGTTCCCTGTCAACGGCGGCGTAAAAACCTGCCACGGGGCGGCGCAAAAGTCTGCCAGTTAGCGACGCCGGCACGGAACGTCGGGAGGGGGTAGCCCGACCAGAGTTCCGTGCCGGCGTCGTTGGCGATTTTCGAGGGTGGGTCAGTCGGCCTTTCTGGCGCGACTGTGGGCGAGACGGTAGCTTTCGCCGTTCATCTCGAGGATGTTGACGTGATGGGTGATGCGGTCGAGCAGCGCGCCGGTCAGGCGCTCGGAACCGAAGGTCTCGGTCCATTCATCGAAGGGCAGATTGCTGGTGATCAGGATCGATCCGCGCTCGTAGCGTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCATGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //