Array 1 9772-11020 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVO01000026.1 Parabacteroides distasonis strain OM02-13 OM02-13.Scaf26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================================= ================== 9772 33 97.0 45 ................................C CCACCAAGGGGCTTTCGGGACAATGCCTCCCCGGTTGAGAATGGA 9850 33 97.0 34 ................................T GAGTACGGCGTTCGCCAATGATCAGGAATGCCTC 9917 33 100.0 34 ................................. GTAAACAGAAGCCCTTATTGTCATTTTTTTCTCT 9984 33 100.0 33 ................................. CCCACCAGCTACGGGTACACGCCGCCCATCCCC 10050 33 100.0 34 ................................. TCATGAGACTATCTGTTGTACTATGTATGCTCAG 10117 33 100.0 34 ................................. GTTTACAGTATAATGATTATACCGCTACCTATGC 10184 33 100.0 34 ................................. ACAGCACGCCGCAAGATACGACGGATTACATAAC 10251 33 97.0 37 ................................G ACAGAACTGTGGACGGTCTGTGCCTCGATATACGAAG 10321 33 97.0 33 ................................G ACAGGTCATGGTGGGGTTCGCCTTGGAGACGAA 10387 33 100.0 33 ................................. AACATGGAGATCATGACCTTGCACGTAGATGAT 10453 33 100.0 35 ................................. TATCCACCCCCTTTGTATTACATCGTTATACGTTA 10521 33 97.0 35 ................................G ATTATGAGATTATTGGAGGAAGTTAATACCACCAA 10589 33 100.0 34 ................................. GGATACTGAAAACGGAGAATAACAATCATGGCTA 10656 33 97.0 34 ................................C ACGTGGAACAAAGTAGCGGAAGGTCTTAGGCTTT 10723 33 100.0 32 ................................. CAATACCCAAAGCGTTTATGAGTATTACCTAA 10788 33 97.0 34 ................................T TACCATTGGTCGAATACCCGATCTTGACAAGACC 10855 33 97.0 33 ................................C AAGTCATCCACGTTTTTTTGAAACTCCGGATGA 10921 33 97.0 34 ................................T TTGGTAAGCTCAACGTAAAACTCAATTTGAGACT 10988 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ============================================= ================== 19 33 98.6 35 GTCGCACCCCGTGTGGGTGCGTGGATTGAAACA # Left flank : TGATAATTATCCGGTATTTCTAATAAAATGATTTACGATTATGCATATTCTTGTGACTTATGATGTGGATACTACGAGCAAAGAAGGAGCTCGCCGCCTACGACATGTGGCTAAGGCTTGCATAGATTATGGCCAAAGGGTACAGAATTCTGTCTTTGAGTGTGAGGTGACAGAAGCACAATATTGTCTCTTGATTGAACGAATCAAGCGTATTATTGATATGTCTCTTGATAGCGTTAGATTTTATATTCTCAATAAAAACGAGAATAAAAGGGTAAAAGTGATAGGTGTTGAAACTGCTTACAAAGTTAATAATGCTCTTATCATATAATTTATGCGAATGTGGAGTATTACGAAAAAAGTAGTATTTTCGCACCCCTTAATAATTAGCAGATTAACCCGTCTTTAAGGCGATTGCAGCCATTAAGCTGAAATAAAAATGAGAATTCGCATATTAATAGGTCTAATTTATTGACTTATAATATGTAACTTTGCACACT # Right flank : ATTTGTAAAGCGCAAGCTTTTTCATAAAAGATATACTTACGTGATGAAGTATATCTTCTATGGGACTTGAAGTGTTCTTCTGCGACGAAGGGATTAGTACTTCGTAAAAATAACTTTTTAAAGTCACTGACTCTGACATATAATTTCGCTTAGTTATTTCTGCAAAAATCATTCATATGTAAACAAGTTTCGTATATTCGCGACCTTATAATAGTTTAAATATGGCAGAGGAACTACGGATTAAAAACGGTGATAAACAGGAGATGTATGAGACATTGCTCCCGCAAATCGCCTCATTGGTAGGTAACGAGACCGACCTAATCGCTAACATGGCGAACATCGCCGCAGCACTCAAGCAGACTTTCGGTTTCTTTTGGGTAGGTTTCTACCGGGTCATAGACAATCAGTTGGTATTAGCGCCTTTTCAAGGCCCTATCGCCTGTACACGTATAAAATACGGAAAAGGGGTATGCGGCACGGCCTGGAAGGAGGCTCGTACG # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.86, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGTGTGGGTGCGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.20,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 125565-125842 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVO01000016.1 Parabacteroides distasonis strain OM02-13 OM02-13.Scaf16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 125565 47 91.5 30 A......C.......................GA.............. TTCTCTGCGTTTTGGTTCAATGCGATTGCA 125642 47 100.0 30 ............................................... ACAACAAGACTGTACTCGAAGGAGGAGTTA 125719 47 100.0 30 ............................................... ATTCGCTTAAAGCATGAGCCGATACGTTGA 125796 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 4 47 97.9 30 GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Left flank : TCTAAACGCTTGGAGAATCGATTATTTCGAGGCAAGGTACGACTTGCTTCCAAATTCGAAAATATTTTTTCACAATAATCTATTGAACAACGCATTACAAATTTTCACTGATTTATTCTAGCGAAAGATTTCGTCTTCTGTCAACCTCAGTCGGACAAACAAGCGACTTTTTATCTGAAAACAATAAGCTTTTCATCCGAAAACAATCGGATTTCCGGTCGGAAACAATAAGGATCGCAGTCGAAAACAGCATACAACGCCGTTATAAACACCTTACTATTGGATCATAATCCCTCTACAAAGCCTATTCATACACTAAAAAATGGCGAAATACGCTGTTTCCGCCTTCCTTTTCTCTCTATTTTCGCATTTCCATAAAAAGCCTTTATCAGCTAAAAGTCTCCATTTTGAGCAAAATGACAGAAAAAGAGATATTTTGATGACATAAAAGAGAATGGCTTACTTTTTGGTGTAGCTGCCCCAATATTTTGCAATATTTT # Right flank : TGGGTTTGATATACATGACACCCAAAAGGAGTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTG # Questionable array : NO Score: 5.76 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTAACTTTGAGCCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.58%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.10,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //