Array 1 126376-120948 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVW01000007.1 Acinetobacter baylyi strain XH445 XH445_contig_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 126375 28 100.0 32 ............................ GACACCAAAGGTAATAAAGCTATGAAAGAATA 126315 28 100.0 32 ............................ TTTACTCTTATTATACTATTACCCCTAACCCC 126255 28 100.0 32 ............................ TCCAGCTAAAATCGTTTGAGGGTGAAACTCCT 126195 28 100.0 32 ............................ ATGATTTCGAAAGGCTCTCCGAGTACGTTATT 126135 28 100.0 32 ............................ ATTCCCAGCATTCACGCTGAGTGCTTCGGCAC 126075 28 100.0 32 ............................ TGTGCAGCCGTTTGGCGCGCCCCAGATATGCG 126015 28 100.0 32 ............................ AGGAACCGTGGCAGATTGCGTTAATATGTTAG 125955 28 100.0 32 ............................ TAACGATGGAATAACGTTCAAAGAATCTAACG 125895 28 100.0 32 ............................ AATTCATGAAAGATCATTCGCTGTGTTTGGGG 125835 28 100.0 32 ............................ ATTTGCCGCTTTGAATATTTGATGCACCTGCT 125775 28 100.0 32 ............................ AAATCGATGAGGGACAACATCAGGCACTCGAC 125715 28 100.0 32 ............................ ACAGGGCAGGGAAATAACCAAAAATCGATATA 125655 28 100.0 32 ............................ GACATAGGAACGATATGAAGATGATTTTTTTT 125595 28 100.0 32 ............................ ATCAAGCTATCGTCATTTGGCCGATACACAGC 125535 28 100.0 32 ............................ TCTGCCATGCATACAATTTGATTTGGCTGCGT 125475 28 100.0 32 ............................ AATCATCAATATCTTTTTGCGCTTTGCGTGAA 125415 28 100.0 32 ............................ TCTCACGTACAAAAAAAAATCCTATTTGATGT 125355 28 100.0 32 ............................ GCGATTGAATACCGATAGATCGGGGATATTAA 125295 28 100.0 33 ............................ ATACACTACATTGAACTGCTCGGACTTAAGCAT 125234 28 100.0 32 ............................ AAAAAAAGTGTAGCCAACTTCATACAGTTACC 125174 28 100.0 32 ............................ CAGGTGGCAGCGTTCCATTTTCGGGGGCAAAT 125114 28 100.0 32 ............................ AAAACCACATTATAAGGCTCGGTAAATGTGTA 125054 28 100.0 32 ............................ ATGAAAATAAGCCCCAATATTGTCAGTGTTCC 124994 28 100.0 32 ............................ GTTTCCGCGTCATTCGGGTACAGTTGCGACAT 124934 28 100.0 32 ............................ TTGAAACCTATGAACTTTGTGTTATACGTGTC 124874 28 100.0 32 ............................ CTTATCAAAATCGGTGGGATCTTTGTCGTACT 124814 28 100.0 32 ............................ GAATTATGCTTTAAAAAATCCTTTCGCGGGTA 124754 28 100.0 32 ............................ AATCCGATTTCTGCTGTTGCTGGGGTTAGAGC 124694 28 100.0 32 ............................ ATGTACTATAAGTCACATGGTAAAGACACGAA 124634 28 100.0 32 ............................ GAAACGTTGAATCCAGAACCAGCAATCCCAGC 124574 28 100.0 32 ............................ AAACTGTGGAGCATTACATCTACCATACTGCC 124514 28 100.0 32 ............................ TAAAACAGTCAATGTTAATTGGGGTGAACAAT 124454 28 100.0 32 ............................ GCGGTAGCTGGCGCGGTGTTTGCGTTTTTTGG 124394 28 100.0 32 ............................ TATAACTAGCATGTCAGAAATAAAACTATCCG 124334 28 100.0 32 ............................ CGTTGGTACTGTTGCAGGTGGTGCATTGGGGA 124274 28 100.0 32 ............................ GACTCCGCTACTTAAGAAAGAGAGCATAGGTG 124214 28 100.0 32 ............................ TAGAAGTAACTTACGATAACATCTTTGGCGCC 124154 28 100.0 32 ............................ TCAAGCATGTGATCACTAATGATTCGGTTTTT 124094 28 100.0 32 ............................ TATACTCCTTATATGTAATTTACGCGTAAACC 124034 28 100.0 32 ............................ CACTACATTTATACCCGCCGTTTACGCTCTTA 123974 28 100.0 32 ............................ GTTTAATGTGGCGTTCAGGTCTTGTTCGCCAA 123914 28 100.0 32 ............................ ACTCAGTTGACCAATCTTACTGCTTCACTTAA 123854 28 100.0 32 ............................ AGAAGATTTGGTGGGCAAAAATATGGAATATA 123794 28 100.0 32 ............................ ATTCTTAGCTGCATCACGCAAGATTTGCTTTT 123734 28 100.0 32 ............................ CTCATCGAAACATACATTGAGAAAAATCATTT 123674 28 100.0 32 ............................ AATCATCATCGACCGCAGTATTGAAGCGAAGC 123614 28 100.0 32 ............................ AGCCCTTCGTATATTTGAATAGTGCATTGGCT 123554 28 100.0 31 ............................ AAAAATACCCGCGCCCAAGTGATCCTGAAGA 123495 28 100.0 32 ............................ AACCATATAGAATTGTTAACTTTTGTAAATAA 123435 28 100.0 32 ............................ GATCAAAACAACAAGCGTACCAATGATGCCGA 123375 28 100.0 32 ............................ ACAAGGGATGTATTGACCAGGTGTGAGCGCAA 123315 28 100.0 32 ............................ ATTCTTGAGCCGCCTGCAGATTTGTTATGTCA 123255 28 100.0 32 ............................ ATGGTTCGGGGTTGTAGCTGTACGCCCCAGAT 123195 28 100.0 32 ............................ AAGAGCAAAAGGTAACTTGGATCTACCGCCAC 123135 28 100.0 32 ............................ CACGGAAATTGGAATGATGATTTCGACGGTAA 123075 28 100.0 32 ............................ TTGTTGAGCAGCAGAACGGCCTTTTACCAACC 123015 28 100.0 32 ............................ AGATACCTCAGTCCAAGCTGCTGAATTTTATC 122955 28 100.0 32 ............................ AAGAGACAACAGGGCTTATTAAAGTAACTTGT 122895 28 100.0 32 ............................ AAGTTTTATTTAAGCCCAAAGCTAAAGATAGT 122835 28 100.0 32 ............................ GTTAGCTGCACAAGCTCTGGGACTTTAATAAA 122775 28 100.0 32 ............................ AATCGCTAACCAGTAGAACCCGCGTAGCAGCG 122715 28 100.0 32 ............................ AAGCGTTGCGAGCGCTCAAAAAGTGGCTGATC 122655 28 100.0 32 ............................ GTCTACCAAAGCGAAAGTATCATTTTCAATGA 122595 28 100.0 32 ............................ TGTATCGGAGCTACGTCAGAAGGTCAAGCACA 122535 28 100.0 32 ............................ AGGTCGATTTATCATAAACATCGGGCACGATA 122475 28 100.0 32 ............................ GCCAGAAATTTTGACACTTGCGTTTAGCAATA 122415 28 100.0 32 ............................ AGATTGTCTCTAAATTTAACGCGTGGCTTTGT 122355 28 100.0 32 ............................ AAAGCCGAGCCCAACTTTTGACGCACAAAAAG 122295 28 100.0 32 ............................ GTCAGTGATTGCTTTCATTGCCGTAGCTACGT 122235 28 100.0 32 ............................ ATCCGCGCCCAATTTGTCCCACCAATCTTTTT 122175 28 100.0 32 ............................ GATTCCATAGAACGTACCATTGACGCGCAACA 122115 28 100.0 32 ............................ TGGATCTCTGCAGAAATCACATTGTCCAAATA 122055 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 121995 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 121935 28 100.0 32 ............................ TGCGAGTTCAAACTTCTTTAAAGATGCAACAT 121875 28 100.0 32 ............................ CGTGGAATCATAATCATAAGCTTCACCGACAC 121815 28 100.0 32 ............................ GATCAGTGGCGCGTCTACAGTGAGCGAGTGGG 121755 28 100.0 32 ............................ ATAATTGCAACAACAGCATAATATACATACCA 121695 28 100.0 32 ............................ CTTACTTTCGCTTGCGCTTCGTTACGAATGCC 121635 28 100.0 32 ............................ TCAACCAGGATCGGATAACCATCAATTCTAAA 121575 28 100.0 32 ............................ AACAGGCGTTACTGAGCTATGTGTCGTTAAAA 121515 28 100.0 32 ............................ AAGCATGCCTTGATGCATACAACAAAATTGCC 121455 28 100.0 32 ............................ CAAATGTAATCAGGATTAGTCGATTGCAGCGT 121395 28 100.0 32 ............................ AGATCGCCTGTGCGTAGGTCAACTGCACCATT 121335 28 100.0 32 ............................ AGCTGAACACGCCGTTTTTTAACTTCCGCCAT 121275 28 100.0 32 ............................ ATGCACCTGATCCTGCCCAATGAGGGATTTAC 121215 28 96.4 32 A........................... TGATGGTGCAGGAACCACAGCAACATCAGTCA 121155 28 100.0 32 ............................ GATTGAAATACTATTAAGGCTGTTCGTAAAGC 121095 28 100.0 32 ............................ ACACACGCTGCCAATTCTTCGTTAGAGTGTAT 121035 28 100.0 32 ............................ AGCAGTAAAAGCCATGACCGTTAAGATCGCTC 120975 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 91 28 100.0 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAGCACTGTATAAAGAATTGGCCAAAGGATTTAATATTGACTTTAAACGAGATGAAGGCAAAAACTCACATGATAGTCTTACCGATATTGCGAATAACTACTTAGATCATGGAAATTACATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGTATGGGAATTAGTTTTGCCCTACCTATCTTGCATGGTAAAACACGCCGCGGAGGTTTAGTGTTTGATCTTGCCGACTTAGTGAAAGATGCTTTTGTGATGCCAACTGCTTTTATATGCGCATCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAACTTATAGAAATATGCCAAGACCAAGATCTTCTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCAAACAATTAACTCAAGTGATTCATAACGAAGTATTTTTACTCATTAAAAGCTTATATAATTGATATCAAGGGTTTTGTTTTGACTTAACTCTA # Right flank : TATTAAAAGCAACATCGATAAGATCTAGCTGTCCAAACTATCAAAAGTTGATTCAAAACTAACTTTACTTCAAATTTTTTTACAGACTCTGATCTTGTACTAAACTATTCATATATGCCACCGCAGCAGTACGGTTTTCGACACAAAGCTTTTCAAAAATATGTTCTAAATGTTTATTCACCGTTCTTGGGCTTAATTCCAAAATCTCGGCAATGTCTTTATTGGTTTTACCCAGTGCAAGCCAATGCGATACTTCGGCTTCACGTTGAGTCAATTGCGGGCAGTATTTTAAAATATCTTCTATACTCAATGCTGTACTGGAAATTTTGATTTGCACCAGATAATTTTTGGTCGTGCTTAAATCATCTTGCCAAGGGGTCAAAAGAATTAACTGAAGTTGCTGTGTCGAGGTAGAGTAAGTACAGCTCATACGTTTTTTATTGTCTTTGTCTTTTTTAATGTCTGCAAACCATTGCTTTAAGCCCAACTTAAAGCCCGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 202392-201407 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVW01000007.1 Acinetobacter baylyi strain XH445 XH445_contig_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 202391 28 100.0 32 ............................ TCACACTGCACTTGCGATTGGGGCACTATCAA 202331 28 100.0 32 ............................ AATGTCGTGAACACTCAGACAGGCGGATACCA 202271 28 100.0 33 ............................ CGACAGAGCAAGACATCACTGATATGTCGAATT 202210 28 100.0 32 ............................ GCAGTCGGACAACTTCAATCGAACGCATCATC 202150 28 100.0 32 ............................ CTGCTTCTCGGTCATCCTTAAATCTGAATGAG 202090 28 100.0 32 ............................ TTCCACCAATCAAGAGTGGATTGGTCAATAGT 202030 28 100.0 32 ............................ AGTCGACCGCGAGACGGGAAAAAGTACGAACA 201970 28 100.0 32 ............................ CGTAGACTGCCACCACCGCACCCCCATACATT 201910 28 100.0 32 ............................ TCGCGCAATCCATCGCGAGGGGCCTATTCGAG 201850 28 100.0 32 ............................ AATGAGAAAATCAAACCACCCATGATGATCGT 201790 28 100.0 28 ............................ TACTCGAACTTGTCTGTCATATTGCCCT 201734 28 89.3 32 TAC......................... TGAATACTCAAATGACAATAAACAGGATAAAG 201674 28 100.0 32 ............................ TGTGAACAAATCCGTTGTAAGCCGCGCCTTAT 201614 28 100.0 32 ............................ ATTTAAAAGCCACTCATCTGACACACCTAAAA 201554 28 100.0 33 ............................ TTATCGAAGTATTCTGCTTTGGGTGCGGCAATG 201493 28 100.0 32 ............................ ACCAGAAATGATTCCAGATATTCCAGATGAAT 201433 27 82.1 0 .C......T..............-..TC | ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.3 32 CTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : CCTAAATCATTAGGTGTAAATGCGATCTGCCGCTGAAGATTACTGATTTCAATCGTATCTGAGTCAATGAGGGTAATTTTGCCGACCCCAGCACGTGCAAGCAACTCAGCCGACGTACAGCCAATTCCACCCGCTCCAACAATCAAGACATTGGCAAATTTTAATTTTTCCTGAGCATCAACATCCCATCCATCTAGTAAAATTTGACGGCTATATAAATGCATTTCTGCATCGTTAAGCTCTAAATCCAGATTGTCCTGATCGTTCACTCGCGATTATCCCAATTTATGAATACTAAATTTATAACTATAATTATAAAGAGAAGCTTGTGTCGTGAGATGTTTTATTTTGACAAAAGTAAGCTTTTACCCCAATATTTTATTTACTCTTTAACAGCCAAATAAAATCAAAGACTTAGTTAAAGTCAAAATAAAATGGGTATTTCCATTTTATTTGCTTTAATGGATTGTTTATATTAATTATTTTTGCACTTTCTTACT # Right flank : AAGTAAATTTTGATCAAACATTTAAAGCATATTAAAATAGTCACTTAAATTATCAATCAAACATTACTTTACTGATTCATATCAGTTTTTCTAACGATAGATAACAAAATTTTGAGTAAAAGAAATGACTGCATGGCAACAACTTGGGATAGAACCCACTACAAATTTAAGAGAAATTAAAAAAGCATATGCTGTAAAGCTCAAGCAAATTGATCAAGATACTCAACCAGATCAGTTTATTGCATTGAGAGAAGCCCTTCAAACTGCCCAATATGAAGCAGAATATGGACTGTTTGATCAAGAAGAGAATCAAGATTCTCTATTTAATGATGATCAGCCACTAAATTTTAATGAGCACACTGAATCCGCTCAAGAAAATGAAATCAATCAATCATCAGACACTTTACTTGAAGAAATTTATCTTGCCATTCAGCAACGTATCGTCGAGCAAGATATTCACTTCAATATTCGAGAAGCATTGCAAAAATTTGCTGATCATC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 234465-234852 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPVW01000007.1 Acinetobacter baylyi strain XH445 XH445_contig_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 234465 28 100.0 32 ............................ AACGCGCATAACCGTCAATCGCTTGCTCAATA 234525 28 100.0 32 ............................ TCACTAGTACAGATGTCGGTTCCGCATTAAGT 234585 28 96.4 32 .......A.................... TAATCCAGCAGATGGTACTGCACGTATCATGA 234645 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 234705 28 100.0 32 ............................ GTGATTGTTAATTTCTGGGTCAGAATAGCGAT 234765 28 100.0 32 ............................ TCTTGCTTCTTGAAGCTTATAAATCGCATCCA 234825 28 89.3 0 ........................ACT. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.0 32 CTTAACTGCCGCACAGGCAGCTTAGAAA # Left flank : ATAACTAAAAAATGATTTGAGAATGGTTTCACCGCTTAATTTTCCACTGGCAATTGGGGTAAGTACGCCAATCGTTAAAATAATCACACCAACATTTAGGCCATGTTGCTGTAAAAAAGGGAAAAATTCACTTAAAGGTGTAAGCTTAAAAACAATTAATACGCCTGCAGCAATAGTTACCGCCGCATTTTGGCTAAAAATACCACAAGCCAGTAAAACGAGTAGAACCAGTAAATTGACATCAAATTGAGACATGAGCATGGTATGAATAGTTAGTTTTGCAGGAATGATTATTGTATAACGATTTTACCAACACTTGAAAAAGAAAGACTTTTTACAGTAAATTGAATATCTATTATACTGGCTTACCCCAAAATTTTAGACTCTTTAAAAAATCAATTTAAATCAAATGCTTATATTTTGACTTAAAAACTTTGGTTAGAAGTGAATTTGTTGATTTAAGTTTTTGATATTTCGACTATTGCTCAACAATATTTACT # Right flank : ATTCAATCAATTGACTTAAAAAAATAAGTTACACTAGGATGTCTTTTTTATTCTGGATATCGATATGCTCTTGGAAAAAATGTTGCAGTCACAAGGTTTTGGTTCAAGAAAATACTGTCAGCAACTTATTAAGAACGGAGCAGTTTCGATACAAGATGAAATTCAAAAAGATCTAAAATATCGAATTCATGATTTAACTGATTTTAATTTTCAGGTTTTTGATCAAAATTACGTATATCGGGAAAAGGTATATATTATTTTAAATAAACCTAAAGGCTTTGAATGTTCTCATCAGCCACATCATCATCAAAGCGTATTCAGTTTACTGCCAGATTTATTAATTCAGCGCAATATTGCGGCTGTAGGGCGCTTGGATCAGGATACTACAGGGCTGTTGTTACTGACTGATGATGGACAATACCTACACACGCTAACGCATCCCAAGAAGCATGTTCCAAAGGTATATCATGTGGCTACGATTGATCCAATTACAGTTGATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTAACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTAACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //