Array 1 914593-914264 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012036.1 Nostoc piscinale CENA21 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 914592 36 97.2 37 .A.................................. CCGACTATCACATTTGCACCTACGCCGGCGGCGGTAG T [914588] 914518 36 100.0 37 .................................... TCCAATTAGGCGATCGCTTACTTTTAACTGTCCGAAA 914445 36 100.0 38 .................................... CAGGAGTTGGGGAGACTTGCCCAGCCTTTACCGTTGCG 914371 36 100.0 36 .................................... TGTCTAAGCGCGTAATCTTCAGAATTATTCTCATGT 914299 36 88.9 0 ....CC................G.......A..... | ========== ====== ====== ====== ==================================== ====================================== ================== 5 36 97.2 37 CTGATTAAACCTTTGATGCCGTAAGGCGTTGATCAC # Left flank : AAGATGCTCAAACGGGTATATAATGCCCTCCCGACTTCGGTTATCAGCAACCTAGAAACCCTTAAAATCTTCACCTACACCATAGACTTCCTGATTTGCATCACCGTTTATTCCCCAGTTAAAAGCGGTAAATTCTCGGACTTCTTTTTCGTCTTAACAACTGGGCAGTGGGGCAAGCTTGATTGGGTGAATTTATTATTGGCTGGCGTGACCTTGTTCGCAATTGAAGTGATTGTCAGCTTGATTATTTGGGTTGGTAAATTAGCTTACGCAATGAAGGAGGCTTCAAGATAATGGCAGATTTTAAAGCGATCGCGCCAAACGGCAAGACAATCGAACTCAAAAACGTAAACCCTGATTTAGTGATAGGCGACGAATTATTTTTTGTGTCGAGCCTAGGAACTGCAACAGTTTGACGGTTTCTGTTGAAGAAAATGGAACCGTTGTTCTAGTGGATAACAGGCTAATTAAAATTGGTGTCTCAAAATAATGGAAATGAG # Right flank : GACAATAACTATTAACTGTCAACGAAACTTTTTGTAATTAGTTTTGTCTATAAGATTAATTCATTAGTTTATCAGGAAATTATATGCGATCGCCTATCGTAATCGGTACAGGGTTGCTTGTATCTATAATTTTGAATGCCCAAGTATTCGCACAATCTACAGTTAATTTGCCACAAATAACTGCCCAGAACTCTTCGCAACAAATCTTAAATCAAAATAATAAAAAGACAAGCTCAGGAATTATTACTCTGCAAAGAACAGCGTGCTTTGGTGCTTGTCCTATTTATAAAATTACGATATTTCCTGATGGCAGAGTTGTCTACGAAGGAGAGCGATTTGTTAAAGTTGTAGGAAAAAGAACTGCCAGAATTAGTCCCCAAGCAGTAAGAAAATTAGTTGCAGAATTTAATAAGGTAAACTATTTCTCGTTATCTGATAGCTACCAAGGCGGACGGACAGATGCACCTTCTGCAATTACTTCTTTAACTATTGGTAAACGT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGATTAAACCTTTGATGCCGTAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [4-4] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 2 1305634-1305306 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012036.1 Nostoc piscinale CENA21 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1305633 36 100.0 35 .................................... AAAATACTGAGCTTCACAAAGAACTTAAACAAATC 1305562 36 100.0 36 .................................... TTACATCGTCGACGCGTCCAATGGGATGTCGATCTG 1305490 36 100.0 40 .................................... ATAATTTATAAAATTGATTCCCTTTTAAAAGGGTGGTACT 1305414 36 100.0 37 .................................... ATAATTATAAAATTGATTCCCTTTAAAGGTGGTCACT 1305341 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 5 36 100.0 37 CTGATTAAACCTTTGATGCCGTAAGGCGTTGATCAC # Left flank : GCTTACAACTTACTCCAAGGATATGGCGAAAGGATGCAATACTCTATTTTCCGTTCTTGGTTGACCATGCGATCGCGCGAAAAGTTGCGTTGGGAACTTGAGAAAATCTTAGCCCCAGAAGACAGTCTGTTATTAATTCGGCTGTCAAATCAGTGCGTTAATTCTATTCCGGCTTACAATCGTCCTGGTGCTTGGTCAAATCAAGACGAACCTTACCGGATTGTCTAAAAACATGGATCTGAGTCTGTGGAATATAAAATAGAACTCAATCAGGATAAAACTCGTACTAGGCTTGCTTTTGAGCCTTTTTAGATTAACAGGAGGTGCTTGCATTTTTTTTTCGTGAGGTGAAAACCTAGTTCTGGTAAGCGTTCTAAGCTCAGGCAGAAACTAGAAACTTAAATTTTTGGTAAGCAATTGACTTCTTTTGTTGCTTTTTAACCTAGATGCTTGCAAAATAGCAACTGAGTGGTCTGATGACATGGGTTTGAGCGATCGCT # Right flank : TGGTAGGAACGGGTAGTTTTTTACCAATGGTGAAAAACTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCGCCCTTCAAGATTCGCCACTTGAAGATTCGCCCGTTGAAGAATCGCCCGTTGAAGAATCGCCCGTTGAAGAATCGCCCGTTGAAGAATCGCCCGTTGAAGAATCGCCCGTTGAAGATTCGCCTCGTAAAGATTCGCCTCGTAAAGATTCGCCTCGTAAAGATTCGCCCCTTGAAGATTTGCCCACAAAAAATCTTTCGCAACTAAAATACAGTTTTGTAAATCTAAAAAACTGAGACAATCTAAGCACAATACATCAGCACCCCAACTAACTCGTTGCCCATGTAAACGAGAAATCCAAGCCCCAAAAGCATTAGAGGCTTTTGGTTTTTCAGATACTTCAGAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGATTAAACCTTTGATGCCGTAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 1316287-1315310 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012036.1 Nostoc piscinale CENA21 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 1316286 36 100.0 35 .................................... CCCAAGCGCGATCCTCGCAGGCAACAACAGCAATA 1316215 36 100.0 36 .................................... GAAGTAATAGCCGAGGAAGAAATCAACTTGCCTTTA 1316143 36 100.0 39 .................................... TTGTTAATGCCGATGCTACAAGAAGTAACTTTGGATTCT 1316068 36 100.0 36 .................................... GAAGGTGGGGCAGTTGAAGTTAACGCCCGTGTTGGT 1315996 36 100.0 37 .................................... TCGATGGAGTTGCGCGTAAGATTAATGAAGTATTTAA 1315923 36 100.0 36 .................................... CAGAGGCTTAAGGCAGTCTGTTTCTTCGTCTTTTGA 1315851 36 100.0 38 .................................... AAAGCCCCTGCCCGATTTTAGGCAGAGGTGATAAGGCG 1315777 36 100.0 37 .................................... AATTCACAAACAACTCGAACTAATGCAGTAGGTTCCA 1315704 36 100.0 37 .................................... GTGCGTAACTAGTTAGCCTGTGAGTCGTTTGTAGAAG 1315631 36 100.0 35 .................................... CTGGTGAAGTTGTTACTTTCAACTCACCAGGAATC 1315560 36 100.0 36 .................................... TATCGCCAAATCAGCGATCGCTACAAACATCGGATA 1315488 36 91.7 36 .....T..............G.A............. ACAGACACAAAGATTCAGGGAAAGTTCTACCCGCTC 1315416 36 97.2 35 .................A.................. GCGATCGCAATTTTCATCACTACATTTGGTGTAGC 1315345 36 94.4 0 ....................TG.............. | ========== ====== ====== ====== ==================================== ======================================= ================== 14 36 98.8 36 CTGACAAAACCTTTGATGCCATTAGGCGTTGATCAC # Left flank : CAGCACGAACGCGAAGGCCGTTGGTGGTGGGAAGAATCTACTGCTAAAGAGTGTGGTCTGCATGTAGGGAACTTACAAAAATAGGACTTACCCATCAAAATTATCTGTGAAAAATGGGTGTAGGGGCTTCGCCGTGAGCATCAGCCGAACGGTGAAAAGTATAGGGTGTAAGGGTTTTGGATACATACACTCCTATACCCCTACACCCTGGTTACTGACTATATTAGTTTTGCATGGATCTACGACTGTGCCTTTCAACAACCCAGCAAAAAATTATATAACTGTTGTCAGCACTGACTTCCAGGGTTTTCACATCACTTGAAGGTGCTTGCATTTTATTTTAGAAGCTTGAAATTGAGATGATACAAGGCTTTCAAGATTAGCATCTGTTCAAAAAAATTAGATTTAGGTAAAAATTTGTTTTATGTATTGCTCCTGGGTGATAGGTGCTTGTAATATCAAATCTCAGGGCAAGCAGGATATGTATTTCCGCGATCGCT # Right flank : TTTACTGCCGAGAGTGAAAATACTTAGTTCCTACTTAGCACTCAGCACTCAGCACTTTGCTATACCAAGGATACCTATTCTAGGTATAAGAAATTAGGAGTTTTTTGAGGGAAAAGTCAAAATATTCAGTTATGCAATATTAACTTTTATCTTTTTTATTTTCTTCTGAAGGCGGAAACGATTTTGCCGGGTAATCTTTCTAAGATGAGTTAAATCAATGAGGCGATCACTATGTCTCGTCATCTAGAAAGATTATTACAACTAGATTCTCTGTTAAGAACTAGGCAACGTCCAACAACTGTTAGTCTTGCTCAAGAGTTAGAGGTGAGTGAACGGACAATTCGTAATGATTTGGCTTTTTTAAAAGATCGCTTTCATGCTCCTTTGGAGTATAGCCATAAATTAGGACATCACTATACTGAATCAGAATGGCGATTGCCGAGTATTCCTTTATCTAAAGGCGAACTATTTGCCTTGACTGTGGGAGCCAGAATGCTAGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGACAAAACCTTTGATGCCATTAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //