Array 1 323-175 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJUJ01000014.1 Pseudomonas daroniae strain P18A NODE_14_length_100409_cov_49.569364, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 322 28 96.4 32 ...........................T GCGCGCATTTGAAGGCATTAAGAATAAGCGGA 262 28 100.0 32 ............................ AATCCGGGGTGTGGATTGGCAAGGATGTTGCG 202 28 75.0 0 ...............A....TC.CCC.G | ========== ====== ====== ====== ============================ ================================ ================== 3 28 90.5 32 CTTCACTGCCGTATAGGCAGCTCAGAAA # Left flank : ACCGTCGATGCCCTCTGCTGGCATCACTACTTTCTGAGCTGCCTGTAGGCAGTGCAGGTCGGCCCTCCTTTCGTGATCGACCTCAACCTTTTCTGAGCTGCCTATACGGCAGTGAAGCGTGGGTGCTTCCTACCATGCGCTCTCTCCCATTTCTGAGCTGCCTATACGGCAGTGAAGCGAGTGGTCGTAGCTGCCCTTCACGTACTGCATTTCTGAGCTGCCTATACGGCAGTGAAGTGACACTGCGCAGCCACGGGAACGGTAATAGCTTCCGCCTGTTTATTCGCCATGGCCCACTACTCGATGCCCCTACCCACGGCCCACTCAGCAGCTACGGCCTCAGCGCCCAGGTCAGCATCCCCTGGTTCTGACCCTTTTTTCCGCATACAAACGGAGTCCTTGCAAAATCAATGGTTTGCAAGCAGCCCCAGGAAAAGGGTTTGCCATGGATAGGCAGTAGATATGTTTAATAAACAGATAGTTAGCGAATAGTAGCTCTT # Right flank : GCGCCTACGGCTTCCCTCCCGTAGCCTGCGGCCTTTTTCCCGCGCCATAAAGACGAAACCCCAGACCTCTGTCGAGATCTGGGGTTTCTTATAGAAGCTTGACGATGACCTACTCTCACATGGGGAGACCCCACACTACCATCGGCGATGCATTGTTTCACTACTGAGTTCGGGA # Questionable array : NO Score: 3.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 586-853 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJUJ01000014.1 Pseudomonas daroniae strain P18A NODE_14_length_100409_cov_49.569364, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 586 28 100.0 32 ............................ TGCAGTACGTGAAGGGCAGCTACGACCACTCG 646 28 100.0 32 ............................ TGGGAGAGAGCGCATGGTAGGAAGCACCCACG 706 28 100.0 32 ............................ AGGTTGAGGTCGATCACGAAAGGAGGGCCGAC 766 27 89.3 32 ..G.......-..C.............. GTAGTGATGCCAGCAGAGGGCATCGACGGTGT 825 28 82.1 0 ....T......A.C..A..A........ | C [836] ========== ====== ====== ====== ============================ ================================ ================== 5 28 94.3 32 CTTCACTGCCGTATAGGCAGCTCAGAAA # Left flank : AAGAAACCCCAGATCTCGACAGAGGTCTGGGGTTTCGTCTTTATGGCGCGGGAAAAAGGCCGCAGGCTACGGGAGGGAAGCCGTAGGCGCTGGGGGACTGCTTATACGGCAGTGAAGCGCAACATCCTTGCCAATCCACACCCCGGATTTTTCTGAGCTGCCTATACGGCAGTGAAGTCCGCTTATTCTTAATGCCTTCAAATGCGCGCATTCTGAGCTGCCTATACGGCAGTGAAGAAGAGCTACTATTCGCTAACTATCTGTTTATTAAACATATCTACTGCCTATCCATGGCAAACCCTTTTCCTGGGGCTGCTTGCAAACCATTGATTTTGCAAGGACTCCGTTTGTATGCGGAAAAAAGGGTCAGAACCAGGGGATGCTGACCTGGGCGCTGAGGCCGTAGCTGCTGAGTGGGCCGTGGGTAGGGGCATCGAGTAGTGGGCCATGGCGAATAAACAGGCGGAAGCTATTACCGTTCCCGTGGCTGCGCAGTGTCA # Right flank : AACGGACAGCGCGAGTCGGGTGGTAAGTGAAGGTTTCAACGCCGTAGCTGTCGGTAATCCAGGCTTTCGGGGCTAAGCGGGTGACAGCTGGGGGGATCTAAACGAAAAAGGCCCAGGTTTTCACCTGAGCCTTCTATCTTTGTCTGTCTGGCGCAGGCGTGCCTCTAACCAATATTTTATCTGTCTGATTTATAAGAATTTTATTTGTTTGTGGAGCCGTCGGGATACACCTGGGGATACACGGCCTCTTCATCTGTGTGCATTTTATGCATTATTTTGTTCGATCCTGAAAAGCTTATCCGATTGAGATAGCTTGACGACGAATAACTCTTCCTTGTTCAACTCCGCCGGTAATTTGTCTCTAAGTATTGATGCGACGAACTGGATACCATTTTTATTTACTAATTCTGCGATCTTAAGTAGCTGATTGTCATGCATCAGTTCCTTTTTATCGTTAAGAAGAAAATGAAAGCAAGGGATGTTATTGGCATCTGCAAATA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGTATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //