Array 1 1718266-1717383 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATJA010000001.1 Desulfobaculum xiamenense strain DSM 24233 Ga0373198_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1718265 29 100.0 32 ............................. ACATTCCTGAACGGCTATATGAGCAGTGGGAA 1718204 29 100.0 32 ............................. GATGATCATCGCCCGCGACATTCCGGAAGTCC 1718143 29 100.0 32 ............................. AGATTTGGGCCGACTCCGGAGCCAGACCCAGA 1718082 29 100.0 32 ............................. GATCCCGGTCAGTTTATCTTGAAGGCGAAAGA 1718021 29 100.0 32 ............................. GCCATAGAGGCAGAGAGAAGGGCATTGCCCCA 1717960 29 100.0 32 ............................. AACACCCCCTGACCAAGAATCAGCCCCAGGGT 1717899 29 100.0 32 ............................. GTCCCGTCGAATTTTCCTGTGCATCGGTGGTA 1717838 29 100.0 32 ............................. TGGGCTGTATCCGCAGTTGGATGCGGCCGTAC 1717777 29 100.0 32 ............................. ACGGTCGCGCAACTGGGCACTGCATCAGACCT 1717716 29 100.0 32 ............................. ACGTTTTCGGGACCGGGCGGAGAATTCTGTAA 1717655 29 100.0 32 ............................. GGGTGTGAAGTGGCTTCTTTTGGGCGGCAGGG 1717594 29 100.0 32 ............................. TTGAATATGAAAGTCTGAATTTCCCAAAGGTG 1717533 29 96.6 32 ............................T AGACACCAGCAATGCAACGTCTGCTCTGCATT 1717472 29 100.0 32 ............................. GATTCGGAAAACGTGTCGGCGGCGATGTTGCC 1717411 29 79.3 0 .....................CC.C.TGA | ========== ====== ====== ====== ============================= ================================ ================== 15 29 98.4 32 GTGTTCCCCGCACGCGCGGGGATGAACCG # Left flank : CTGCACAAGATTATTCCAACCATCGAGGATGTGCTGGCCGCTGGTGAGATTCCAGTTCCGGAGCCGCCCGAGGACGCTGTGGGACCAGCTTTCAGTGACGAGGAGGGGATTGGCGATGCTGGTCATCGTAACTGAAAATGTCCCGCCTCGGTTGCGGGGGCGGCTTGCGGTGTGGCTGTTGGAGATACGGGCGGGAGTGTTTGTTGGGAACTACTCCGTCCGCGTGCGCGATATGGTCTGGAAACAGGTCGAGGCGGGCGTTGAGGATGGTAACGCCGTGATGGTCTGGTCCGCCGCTACGGAAAGCGGCTTCGATTTCAGGACGATTGGTCCCAACAGGCGACTGCCGAAGGACATGGACGGCATCCTCCTGTGCGCCTTCCATCCCGAGCGGGAGGCTGGTGTTGGCGAACAGCGGGGAAGCCTAAAAACGGACAGAGAAAATCGGTAGATTTTTGTCGAGCATTTTTGTTCAATGAAATCCGAAAGTTGCAGGAAGA # Right flank : GAATGTCCCGAGGGGGACGCGTCGCCCATCGAACGGGCGCGAGGCGTGGGGTGCGCTGTGGGCGCGGTTGAGTGTCGCTCAGCCGCGCCCGGTCGTTTCAGCGGGCCTGCGCGCGGTTGGGGTCGAAGGCGTCGCGCACGGCTTCGCCGATGAAGACGAGGAGCATGAGCAGCCCGCCAAGGACGGCGAAGGCTGAGAGTCCGATCCATGGGGCCTGGATGTTGGCCTTGCCCTGCGCGAGGAGTTCGCCGAGGGCCGGGGAGTCCGGCGGCAGGCCGAAGCCGAGGAAGTCCAGTGAGGTGAGCGTGGTGATTGAGCCGTTGAGGATGAATGGCAGGAAGGTGATGGTGGCGACCATGGCGTTGGGCAGGATGTGCCGGAACATGATCACCCTGTCCGTGACGCCGAGGGCACGTGCGGCCTGAACGTAGCAGAGGTTGCGCCCACGCAGAAATTCCGCCCGCACGATGTCAACCAGTCCCATCCAGCTAAACAGCAGC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCTCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1727400-1724507 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATJA010000001.1 Desulfobaculum xiamenense strain DSM 24233 Ga0373198_01, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1727399 29 100.0 32 ............................. GCCGCATTGAGCACGGCTGGAGCCTCGGCCTT 1727338 29 100.0 32 ............................. TCGGTAAGCGTCACGTTGAAGGCAATGGCCGT 1727277 29 100.0 32 ............................. ATTCGAAACCTTGTCTTTCAAAACCTCTATAT 1727216 29 100.0 32 ............................. GAAGTTGGCGGCGGGCTGAAGCAACTGTATTG 1727155 29 100.0 32 ............................. CGTATGAAAAATCAATTTCAACGCTGTAATGA 1727094 29 96.6 33 ............................A GATGAATCCTTTATTTTGTTCAAAAATAACGGA 1727032 29 100.0 32 ............................. CGCGGGGAACGCACGAGGCCGCAGGGGTAGTC 1726971 29 100.0 32 ............................. CTTTACAGGTCGTTTCAGGCTGGGGCTGTGGA 1726910 29 100.0 32 ............................. TTTATCCTGCGATTATTTATTGTGGAATGAAC 1726849 29 100.0 32 ............................. ACAAATAAATCAGCAGACATTGTGATAATTAA 1726788 29 100.0 32 ............................. CATTAAAGCTTGGGTTGATTGATAGCATCAAA 1726727 29 100.0 32 ............................. TATTAATATAGGAAATGTTATTCCTACCAATA 1726666 29 100.0 32 ............................. GCGTTTTGCCCGGCGAATGCGGTGTTAGTGCC 1726605 29 96.6 30 ............................T TCTGGCGAGTGTACTTGACAGCACCTTCGG 1726546 29 93.1 32 AC........................... CTCCGCAGCAAAGGCAAAATCTAAAGGAGACT 1726485 29 100.0 32 ............................. ATTATAGACCTCGACGCAAAATTCCCAACCAT 1726424 29 100.0 31 ............................. CATCCGCCTGTCTGACGACGTGATAGATTGG 1726364 29 100.0 32 ............................. CCGTTGCGTAGACCAACAGCGTTTGCGCGACG 1726303 29 100.0 32 ............................. TACGGCTCGTCCGACGGTGACCGCCAGTACCT 1726242 29 100.0 32 ............................. CGTGTATAGGACTCGCGGCGCACGGCATCGAG 1726181 29 100.0 32 ............................. AGGTATACCCAAGCCCAGCAAATGACTGGACG 1726120 29 100.0 32 ............................. GTCGCGGAGCAGGGCAAGCTGACATCGACAGC 1726059 29 96.6 32 ...........................G. GCCCTCCCCCTGTGCACCGCCAGCTGGAACGA 1725998 29 96.6 31 ...........................G. TGGGCGAGCATCACGGCCTTCGGGGGGCAAG 1725938 29 100.0 32 ............................. ACGCGGGAGCTTTTGGAACGCTGGTGACGGTC 1725877 29 100.0 32 ............................. ATAAACTTGCCCTTCAAGTGAGCGAGCTGATC 1725816 29 100.0 32 ............................. TCCGCCGTGGTCTCGCGTCCCTCGATGTTCAG 1725755 29 100.0 32 ............................. CTCCCATGTTGCGCCGGGAGCCTTCTGCAGGC 1725694 29 100.0 32 ............................. GCGGAAGCATGGAATTCCTGACCCATCAGGGC 1725633 29 96.6 32 ............................A AAGAACCGACACCGCTCACATTATCGGTGAAC 1725572 29 100.0 32 ............................. AAAATGGCCCACCTTTCGATGGGCCAACTAGG 1725511 29 100.0 32 ............................. GCTGATATCGATAGTGCGGTAGCCTACTACGG 1725450 29 100.0 32 ............................. TTCACATACGGCGGATTAATCGGCATTGCGCA 1725389 29 100.0 32 ............................. ATCAGATGATTCGACTTACGCGCACTGGTCCA 1725328 29 100.0 32 ............................. TTCACACTGATTCATGGCGTTAGCTCCATCTG 1725267 29 96.6 32 ............................C CCACGCGTTCCGTTTCGTCCACCTCGACGCTC 1725206 29 100.0 32 ............................. CGGGCCGCTGTGCGCCGGGTGCTGCGCATCGA 1725145 29 96.6 31 ..................A.......... ACGGGGGGTAGGCTGCCCAGTCCCGTGCAGG 1725085 29 100.0 32 ............................. AAATCCGAGATTCTCTACGCCGTGACTGACCG 1725024 29 100.0 32 ............................. GCCGCTTCCTGTGCAGGGGTCATGTTCCCCCA 1724963 29 100.0 33 ............................. ATGTTTGGTGTCCTTCTGGTATACTGCTTGTTT 1724901 29 100.0 32 ............................. GACTCCTGGAACATATCGGCAAGAGGCGCGCT 1724840 29 100.0 32 ............................. ACTCCGCGCCAACCTAGACGCGGAGCATAAAT 1724779 29 100.0 32 ............................. GCCTCCAATGGGGCCTGCTATTGCTGTTCCTA 1724718 29 100.0 32 ............................. GTGTTCCAATCACTTGGTGCAACCACTAAACG 1724657 29 100.0 32 ............................. ATGCGCCGCAACTCGTCGCCTGTTTTGCCAGT 1724596 29 100.0 32 ............................. TCGGGCAACGCCGTCTCTGATCCCGTGGTGTG 1724535 29 89.7 0 ..........................TTT | ========== ====== ====== ====== ============================= ================================= ================== 48 29 99.1 32 GTGTTCCCCGCGCACGCGGGGATGAACCG # Left flank : TTTTGCTGATGGCTATGCGCGGGCGGGGGATGGCATGCGTTGGGATAGGGATGTGAAGACCCCGACGCGTCTTGGCGAGGAAACGCGTCAAGTGCGGCTCGTTCGGTGCGAGCCAGAGGGGTTGCGGCTCTGGGCGGATATGCGGGGAGGCAATGTCGGCATGACGGCCTGTCTTGCCTCGGAGCTTCGGATTGGTGCATGGAAGATCGCAGAGCCCGAACTCTCGCGTGATGAGACGCAAGCTTTGACGGATTTTGCACAGACCCTGCCGGACAAGGCGCACTGGTGTATGCTTTTGCCACTTTGTCCGTGCGGTGAAGGCGGATGGTCGGCAACCGTTCGCGATGGGCAGGGTCGGTTGAGAAGGGTGTTTTATGGTTCGGATGGCCTGTTCTTTGGAGAAGCGGAAGACGTGTAATTTGGGCGAAAAATGCGCCTGAATAATCGGTAGATTTTGAATGTGGATTATTGTTCAATTATTCCATACTCTTCCCGGAAGA # Right flank : GCTTCTGTGATTTGCTGGGTGACTTTTTGTGAGCCTCCGAGAGAGTATTGGAGGTAGATATTCTGATATTGTTTTTTGTGCTTTCGGATAGACTTTCCTTTTCCTTTGAACAGGGGTAACGGAAATCAATTTGCACTCAATTGAGATCCATGGAGAAACCCCATGTTCAATCTGCTTGAAGAACGATGGCTTCCCGTAATCCGCGCCGATGGGACACAGGGCGTGATTGCGCCGTGGGAGATTGCTGCGGGGGGGTCGCTTCCCGTGGCGCTTCATGTGCCCCGGCCGGATTTCAGGGCGGCCATGATGGAGTTCCTTGTGGGACTTCTACAGACAGTGCGGCCTCCAGCGAGACGCAAGGATTGGCTGGCTCAATTGCGCCAGCCACCATCGCCGGACGAACTGCGTCAGGCCATGCGCCCGCATGTGCCATTCTTTGAACTCTTTGGGCAACGTCCGCTCTTCTTGCAGGACCTGACGCTCGAAGCTCCCGCCAAGGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //