Array 1 505748-507637 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJMK01000001.1 Streptococcus sanguinis strain KLC04 D8888_contig001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 505748 36 100.0 31 .................................... ACAGGAGGGGTCACAAAGGCTAACAATGAGA 505815 36 100.0 30 .................................... CCGAGAGCTAAACGCTATCTCAGAGGCTCT 505881 36 100.0 30 .................................... AATGTCACCAGAGCCAAACAGCAAGTACAT 505947 36 100.0 30 .................................... TATCATTCTTTAGTATTAAGGGTGGGTGGT 506013 36 100.0 30 .................................... AGACCGATTGAGTTTAATTTAAAGAAGCCC 506079 36 100.0 30 .................................... TCTTGTGGGTGTTCCAAAAGATGTTGACCT 506145 36 100.0 30 .................................... AGTTAATTGTACGTAAGTCTTCAATTTCCT 506211 36 100.0 30 .................................... TCGCCAATAACTTTATAATGGTACTGAGAG 506277 36 100.0 30 .................................... GGCAGGGCCTAAGAATTGTATAGCAAGTTT 506343 36 100.0 30 .................................... TCCCATAGCGATATACATTGCAAAACTAGC 506409 36 100.0 30 .................................... ATCCATCAATTATACCATCTGATGAAAGCA 506475 36 100.0 30 .................................... TGTAGTTCATTTGGCACATAATCATCATCA 506541 36 100.0 30 .................................... AGCCAATTCTTATGGTATTGCTGGACTTGT 506607 36 100.0 30 .................................... ATGGTTTTAAATTTAAAACAGAAGATAATT 506673 36 100.0 30 .................................... AGTTTTCTTACACATTTATCATCGTTTCCG 506739 36 100.0 30 .................................... ACAATCATATCTTTTGTGTACTGTTTATAT 506805 36 100.0 30 .................................... CAGAAGATGCTATCAAAGGCGTCCTTACCA 506871 36 100.0 30 .................................... GAAAAAGATTGAGTCTTTTGGTTCTGGTGG 506937 36 100.0 30 .................................... ACAAATATCAATACGGGATATATCGTCAAT 507003 36 100.0 30 .................................... TAAAGAACGTTGGGAATACTGGCATGGGCC 507069 36 100.0 30 .................................... TTCAAGCAGTATATTTCACAGAAGCCATTC 507135 36 100.0 30 .................................... CTGACAACGCCAATAAGATGGGTACCTCTA 507201 36 100.0 30 .................................... CCGTAGAGGGCAGCACAGTGACGAGCGGAA 507267 36 100.0 30 .................................... CTGCTTATCGTGATAATCATATCCGTGGCA 507333 36 100.0 30 .................................... TTTAGAACAAGTGATTGATGATTTGTTAAA 507399 36 100.0 30 .................................... TTTAGAACAAGTGATTGATGATTTGTTAAA 507465 36 100.0 30 .................................... GATATAAGGGAAATAGTCAGATACAGTGGC 507531 36 94.4 30 ..............................T....T TTAAATCAAGTTGCACGTACAAGGCCAATA 507597 36 86.1 0 ......................TT..T...T....A | TTA,A,A [507622,507628,507631] ========== ====== ====== ====== ==================================== =============================== ================== 29 36 99.3 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTTAAGTCCGTGATTGAAAAGTTGGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATCACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACTCTAAGTGATACACTTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGCATCTGCCTATCTATCAAAGGATGAGTTAGTAAATTTGATAGAGTATATCCAACTTAATCAACTGTCCGTCTTGTTTGTTGAGCCTCGGAAAATCTATGATTTTCCGCAGTATGTATTGGATCAAGACTATTTCTTGAACCCCGAAAATATGGTATAATTAGAGTAACAATTGGAACCTGACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AGGACTGTTTTGTCAAGCCCCAGATAAACTGGACAGTAAAAAAGTACATTATTGATGAAGGTATGACTCCCTGAATTCCACAGGGGTCATACCTTTTAATTTTTCTTGCGGTCTATCAAAGTTATACCACTGAATATAGTAGCTAATTTGTTGGATTAACTCATCTCTAGTTTCTGGTTTGTGAAGGCTAAGTGACTCACTCTTTAAATGGGAGAAGAAATTCTCACAACAAGCATTGTCATAACAGTTTCCTCTTCCTGAGTGAGAGATTGTTACGTCGTAGGCATCTAATTTTCTTAAGTATTGGACGTTTGTATATTGAAAGCCTTGATCTGAATGGAGAATACACGATTAGGTCGTATCCCATGTTTCATTAAAGAGCAAATCTAAATTATCAAAAACAAGACGATTATCATTGAAATCGGAAAGCTGATAGGCTAGAATAGAGTTGTCATATAAGTCTTTTATGACACTTAGAAACATCCGTCCATTTTTGTAAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //