Array 1 1062880-1064703 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045423.1 Microvirga thermotolerans strain HR1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1062880 32 100.0 34 ................................ GCGACCTCGACACGCGCATTATGCTTGCGGGCAA 1062946 32 100.0 35 ................................ GCCAAATGGCGGAAGCGCTCGATCACGGCCCATTG 1063013 32 100.0 33 ................................ GAAGCCATTCCGACCGATCCCGGCTCTGCCGTG 1063078 32 100.0 34 ................................ AAAAGCGCTTGACGAGACCGACCGGGCGAACAGG 1063144 32 100.0 34 ................................ ACAAACGCTGCGCAGTCGTCACATCCCCGAATGC 1063210 32 100.0 35 ................................ ATTACGATGCGCGGCGAGCTTCCGCGCTATCTGAA 1063277 32 100.0 34 ................................ GCGTACATGGCGCCGCGCAAGTCCGTGTCGCTAT 1063343 32 100.0 35 ................................ ACAAGCTGGCCGTTTACATAATCGTAGCCAAGCGT 1063410 32 100.0 34 ................................ GCCGCAATCTGCGCATTTGCAGTAGCCGCCGCTG 1063476 32 100.0 35 ................................ TGCTATGGCTCAGGCGAAGAAGATGGAAGATTTTG 1063543 32 100.0 34 ................................ CACGCTGCCACGTCATGCGGTTGCATAGAGGACG 1063609 32 100.0 35 ................................ CTTTATGCGTCGGGATTATCCGCCACCTTGGCGGC 1063676 32 100.0 35 ................................ CGCACAAAGCGCAGACATGTCGTGTAGTGACGGGA 1063743 32 100.0 35 ................................ TCGATCACAGGCGCGCGCCCCCATCCCGCGCCCGC 1063810 32 100.0 35 ................................ CATTTGAATTTTTCGTCTGGCGTTTTCGTGCGCAG 1063877 32 100.0 34 ................................ ATGTGAAGATCCTCTTCAGCAGGGATAGGAGGGT 1063943 32 100.0 34 ................................ TGCAGAAGGGCGAGTGGGTCCTGTCCCGGGACGA 1064009 32 100.0 35 ................................ GGGTTCGTGGTCGTCCGTTGGCACAGGAAGGTAAA 1064076 32 96.9 31 ......................T......... CGCGCCCTGCGCAAGCAGCGCCTGGTTGGAA 1064139 32 100.0 35 ................................ GTCTCCGAACTCGCGGTAAGCCGCCTCGGGGATGG 1064206 32 100.0 37 ................................ CGCCTCTTTGGCAGCGACGTTGGCCTGCGACCGGGCG 1064275 32 100.0 35 ................................ ACCGTGTGGCCGCCCATGTAGATGGCCATCCACCA 1064342 32 100.0 35 ................................ CAGTTCCGGCGTGACCTTGACGTTGGCTTCTTTCG 1064409 32 100.0 33 ................................ GTCTACGACCATACCGATTGGGAGGTGACTCAC 1064474 32 100.0 32 ................................ TTTCGAGATGGCCAATGCGTCGGCCTGGCGAG 1064538 32 100.0 35 ................................ ATTAACGGCATGGCCCGCACCGCACCGCAGGGCGT 1064605 32 100.0 35 ................................ GCAGATTACTACCCGCCTCTTAAGTGGGCGCTCTC 1064672 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 28 32 99.9 34 GTCGCTCCCCGCGCGGGAGCGTGGATTGAAAC # Left flank : GTGAGCTACGATGTGGACACGACGTCCCCCGGCGGTCCCGCCCGCTTGCGGCGCGTGGCGCGCGCCTGTCAGGACTTCGGCCAGCGGGTGCAGTTCTCCGTGTTCGAGTGCGAGGTCGATCCCGCCCAGTGGATCGCTCTCAAGGCCCGCCTCCTGAAGGCAATCGACAGCGAGCGCGACAGCCTGCGGTTCTACTTCCTCGGCGCGCAGGGCCGCCGGCGTGTCGAGCACGTGGGAGCGAAGGCCTCGCGAGACCTCGATGGGCCGCTCCTCGCCTGAGGCAAGCGCGTTCCGTCTCCACCCTCCGGCCAGAGGATGACCGCGCGAACCCCGAGCGGCCGACCGTCGCCCTCACACGGTTCGCGCTCTGCTAACCTATTGCCGATACATCGGCTTTCCCAACCGAGTGCCGCCCCCGCGTCGCCGGAGGCATCCCAACCCGCCCGGCTCGCGCAGGCCGACCGCTTTTCCGCGGTCGAACAAGGAGATAGGAGAAGGGA # Right flank : CCGCCGGTGAGCGTCGGCGAGGCGATGGTGACGGTCGTCGCTCCCCGCGCGGGAGCGATCTAAGAGCGCAGCAAGCGACGGGTTCCGAAGGACCCATGGTGAGGAGCGCAGTATCTCGAAGCCGGGACGTCCCCAGAGGGCAGGGGATCATCCTTCGAGTCTCCGCCTCGTGGCAGCTCCTCGGGAGGAAGGCGAATGGAGCGGTCGGCGTCTCAGGCGCATCATGCGGCCGGCTGGTCCTCGTGCATGGACCGGTTGCCGTGGCCGCGGGCGGGCCCGGGCGGCGGTTCGGCCGTCAGGCGAGCGGACAGGCGCTCGACGTCCGCCTTGACCTTCTCGATGGCCGCCTCCTTGACGGGCCCGTAGCCGCGGATGTCCATCGGTGCCCGGGCGATCGCCAGCAGGTCGGGAAGCCGACCTGCCTCGAGATGGGCGACGATGCGGTCGATCTGCTCCTCGTACCAGCCGATCAGGGCGCGCTCCGTCCGGCGCTCGGCGGT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //