Array 1 32360-29708 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTXT01000005.1 Raoultella ornithinolytica strain R10311 NODE_5_length_244477_cov_29.7782, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 32359 29 100.0 32 ............................. GATGCGGTCCCTCTCGCGCTGCGGAGTGTCGT 32298 29 100.0 32 ............................. CGTTTACTTGTATTTTAGTTGAGTTTACAATC 32237 29 100.0 32 ............................. ATATCGCCGCAAGTTTTGGACTGGTTGAAAAA 32176 29 100.0 32 ............................. CCTTCCGGGTTACCTTTGTTCGGTGATGAAAT 32115 29 100.0 32 ............................. CAATGAGGAAATTTCCTCAACCAAACTATGTT 32054 29 100.0 32 ............................. CGTTTCATGGTGTCGATAATCCTCTTAGTTTG 31993 29 100.0 32 ............................. GTGATCCTAGTGGGTCGCATCGGAATGGATCC 31932 29 100.0 32 ............................. TCACCAATGTTAAGGGCAATATCACCACCATC 31871 29 100.0 32 ............................. GAAACGCGTATGTACGGTTGCCAGGTTTCTTT 31810 29 100.0 32 ............................. TGAGTGATAAAGCTCCTGAGCCTCCCACGCTT 31749 29 100.0 32 ............................. GCTAGGCTCCATATCAACATAATCTTCAGGGT 31688 29 100.0 32 ............................. CCAGCGCCGTTTTTCCTGCGCCGGTAGGTGCC 31627 29 100.0 32 ............................. CCAATGGTTGCCGTGGTATTGGCGATATCAAC 31566 29 100.0 32 ............................. TGACCCAGCAGGGCAACGAGATTGACGCAGCA 31505 29 100.0 32 ............................. GCCTTATTAATTTCCGCAGCACCTGGTATTTA 31444 29 100.0 32 ............................. TCACGGTTGTTCATCATTTACGCCCCGTTGAT 31383 29 100.0 32 ............................. CATACGGTGGCATTGCCAGCGTTGCCCAGATC 31322 29 100.0 32 ............................. AAGACGCAGCACTGAACGGCAGCAAAGAACGC 31261 29 100.0 32 ............................. TAAACAGGTTATTGGAACAGCCGATCAAACGC 31200 29 100.0 32 ............................. GAAGTGATCCATACTCTGTACATCAACTGAAC 31139 29 100.0 32 ............................. AGTGAGGCGAACGAGCTGGTTATCGAGGTGAT 31078 29 100.0 32 ............................. TTTGCGAGGCGAACGGCATTCCTTTCGTTTTC 31017 29 100.0 32 ............................. GCACCCTGCCCGACGCAATGGACTCGATTTTT 30956 29 100.0 32 ............................. TTCAACCATCCAGTGGCCAATCGCACTGGTTA 30895 29 100.0 32 ............................. GTTTATGGCGCATGCGTCGCAAACATGGCACT 30834 29 96.6 32 ............................C TCATCAAATAAGGCATTAGTTATCTGTCTGGC 30773 29 100.0 32 ............................. TGGGATAACATTGCTCATGGTAAGCCTCTACC 30712 29 100.0 32 ............................. GCAGGTTCCAGCTCACTCGCGTCAAACTCGTC 30651 29 100.0 32 ............................. TCCCCGTCTAACTCGTCCGGGTCATCCTGTTT 30590 29 100.0 32 ............................. CAAAAATGAAATAAATCAGGGTGGAGGGGTTG 30529 29 100.0 32 ............................. ATCCGTTTGTGTTCAGGCGCTGAGGTACCGGC 30468 29 100.0 32 ............................. ATCCGTTTGTGTTCAGGCGCTGAGGTACCGGC 30407 29 100.0 32 ............................. GGGATAAACGAGGTTAAAACCCTGGTCCGCGA 30346 29 100.0 32 ............................. CTGACCACCACACCACATTCTGCTTTCTGTTC 30285 29 100.0 32 ............................. CGGAGAAACCCCGGCATGGAGATATCGTCATT 30224 29 100.0 32 ............................. AAACTGGCATAAATCTAGAGTAAGAGCCAGCG 30163 29 100.0 32 ............................. ACATTACGCAAACTTTATTTATATGCTAACGG 30102 29 100.0 32 ............................. GCCAGACCAGCCTCGATGATCTGCTGTGGTTC 30041 29 96.6 32 .............T............... GCCAGACCAGCCTCGATGATCTGCTGTGGTTC 29980 29 96.6 32 ............T................ CTATATATTGTCTGGTCATCATCACCGACTAT 29919 29 100.0 32 ............................. AATCAGGGCGACGCGCTCTCGCGTGTGGTGCC 29858 29 100.0 32 ............................. CTGATTGGTTATGCACGGGTGTCCACCGGGGA 29797 29 96.6 32 .............T............... GTCCGTGTGCGCGGAATATTCCCGGATGCGTC 29736 29 93.1 0 A...........T................ | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CTTATTGAAGAGGTTCTTGCCGCGGGGGAAATCCAACCTCCAGCTCCCCCTGAAGATTCGCAACCCGTTGCGATCCCACTTCCTGTCTCGTTGGGAGACTCTGGCCATCGGAGTAATTGAGGATGAGTATGCTGGTTGTTGTGACTGAAAATGTACCACCGCGACTGCGAGGAAGGCTGGCAGTCTGGCTTCTGGAGGTCCGCGCTGGGGTTTATGTTGGCGATGTTTCAGCAAAAATTCGCGAGATGATATGGCAACAAGTCACTGTTTTGGCACAAGAGGGAAATGTCGTGATGGCATGGGCAACGAATACTGAATCAGGATTTGAATTTCAGACTTTCGGTGAAAACCGACGTATTCCGGTAGATCTGGATGGGCTGAGACTGGTGTCATTTTTACCCATTAAAATTCAATAAGTTAGTGTTCTTTAAAAATACGGAAAGTTTGGTAGGATTGAGTGTGTTGAAAAAAGTCTTTTAGTTCAGTTGCATAGCGTTAGA # Right flank : CAGCGCTGTATTACTGCCTGGTAACGCAGGGATGTGCACCTTCCCCGTAACAGAAAACGCCGGCTAGCCGCGCTTTTCCGCCTTTGCCAGCTCTTTTATCAGCGGCAGCATCACCTTGACGACATCGCGGCTGCGGTGTTCGATACGACCCGGCAGAGCCTTATCAATATGCTGCTGGTTATCCAGCTGTACGTCATGCCAGCTGGTTCCTCGCGGGAAGGAGGCGGATTTGTTGCGCTGTTGATAGCCATCTTTCTTACCCAGAGACCAGTTCGTGGCCTCCACGGACAGGACCGGGATCCCCGCGCTATCAAAAATGCTGGCGTCATTACAGCAGCCGGTACCCTGCGGATAATCATGATTGAGGCCAGGATTGGTATAGGCGGCAATCCCTTTGCTGCGCGCAATAGCCAGCGCGCGGTCTCGGGTGAGTTTGCGAATCGAGGCGGGAGTGCTGCGCCCGCTATTAAAATAGAGCTTATCGCCAACCACCAGATTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //