Array 1 34-1487 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000140.1 Myxococcus virescens strain NBRC 100334 sequence140, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 34 37 97.3 32 ...............A..................... TCAACAAGGTGGCGCACGGGGCCAATCTCCTG 103 37 100.0 35 ..................................... TGGGTCAAGCAGCGTCACCTCCAGTCGCCCCAGCG 175 37 100.0 34 ..................................... CAGGGCGGGATGATTGCCGGGGCCGGGTTGCTCG 246 37 100.0 34 ..................................... GCTCGATTCTGGCAAACGCCTTATGCGGCTCGCG 317 37 100.0 35 ..................................... GTTACAGGCCCAGGTTGATGGCCTGCTCGACCGTC 389 37 100.0 33 ..................................... CTGGACTACGCGGACCCGGGTGTGGCCGACACC 459 37 100.0 32 ..................................... GTCGGGGTACTCGCCATTCGTAAGCGGGTACG 528 37 100.0 35 ..................................... ATCGACGCGGCGATGGGCGCCACTGCGACAGGGAG 600 37 100.0 32 ..................................... AAGGGACGGAAGCCGAATGGCGACTGGCACGT 669 37 100.0 37 ..................................... TCGACGGTAGACGGCCGGTGGCGGAAGCACCTCCTGC 743 37 100.0 35 ..................................... CATCGAATGGTGCCACTGGGATGTTGACCGATGCC 815 37 100.0 34 ..................................... TGCTGTGTGCGGACCTTCTCCTCCCACCGCGCCA 886 37 100.0 34 ..................................... GCGCACGCCGTGACGCTCCAGCTCGCGCAGCGTC 957 37 100.0 32 ..................................... TGCTCCAGGGTGAGCAGCCGGCGGTTGCGAAT 1026 37 100.0 35 ..................................... AGCGCCCGGGCCGCGCAGAAGGTGCGGGCCCGGGA 1098 37 100.0 33 ..................................... GCCATTTCCGAGCCTCACGCGTTGGACTACCTG 1168 37 100.0 33 ..................................... AAGAATCCCGAGGGCGAGGACTTCGACCGCTAC 1238 37 100.0 34 ..................................... TGCGCCGCCGCCGCGGAGCAGCCCCGCGTCACCA 1309 37 100.0 35 ..................................... GAAGTGCAGACGGACGAGGGCATTTGGCAGGCGAC 1381 37 100.0 33 ..................................... GTCATCCCGAAGGAATCCAGGCCCGGGAGGCTG 1451 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 21 37 99.9 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : CCGAGCACGCCTCAAAAAGGTCCTTCGGGAACCG # Right flank : CCTCGCAAGCGTAGGTCGCCCGCGAGCTCGCGCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-15.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 36-994 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000163.1 Myxococcus virescens strain NBRC 100334 sequence163, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 36 37 100.0 33 ..................................... TAAGCGAGGGAGGCCCCATGAATTCAAGGTCAC 106 37 100.0 35 ..................................... TATCCAGCCGACCTCGTGCGGCTGGAGGTCACGAA 178 37 100.0 34 ..................................... CGCGTCGTGGCCAATACGAAGAAGTCCCGCTCCG 249 37 100.0 33 ..................................... CCCGCGAGAAGGGTGGCCTGCTCTTGCTGGGAA 319 37 100.0 36 ..................................... GGGGCGCGTCGTGGCCTCCTTGACGGCTTGTGCCCC 392 37 100.0 34 ..................................... TCTACATTCCGCCCGACGTCTGGGACGAGGTGTA 463 37 100.0 36 ..................................... GGTGAGCGGGGGAGGGTTTCTCCACCTGTTGAGCGT 536 37 97.3 32 ......................C.............. CAACCGTTGGAGAACTTGTTCCCGCCCATCGC 605 37 100.0 37 ..................................... TCGTTGTTCGCGGCCTCCGCATCCCTGCGCGCCTGCT 679 37 100.0 32 ..................................... CAAGTTTTGCAAGTCCTAATGGCGCGGGCGTC 748 37 100.0 32 ..................................... GCAGCCACCGCGTGCCCGGACCACTCGACGAG 817 37 100.0 34 ..................................... TGCGCCCGCTTCGGCTGGAGCAACACCGGCGCTC 888 37 97.3 33 ......................C.............. CACCCGACACGGTTGCAGCGCTTGCGGGTGGCA 958 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 14 37 99.6 34 GTCGCTCCCCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : CGCGCTCAGCGTGGACGAAAACGGGACGTTGAGCTG # Right flank : TGGTGGACCTGCGAAGGGCCTTCGATGAGGCCTCCG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-20.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 37-709 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000031.1 Myxococcus virescens strain NBRC 100334 sequence031, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 37 37 100.0 34 ..................................... AGACGAAGGGCGGCAAGGCGGTCACGCGGAACCT 108 37 100.0 32 ..................................... ATGACCGGGGCCAGGAGGCGCTTGAGGTCGAC 177 37 100.0 35 ..................................... CCGTGGAGTACCGCACGCTGCCGAGCTACGCGAGC 249 37 100.0 33 ..................................... TGCTCAAGCCGCCCAGCGACCCGGCTGTGTGAT 319 37 100.0 33 ..................................... TGCCCTGGAGCAAATCAAAGAGCTGCGCAAGAA 389 37 100.0 35 ..................................... AGGGACGTGGTGGCCGACATGATCGGCAGGACCAA 461 37 97.3 33 ...................A................. CAGAACAACATGGCGGCGCGCCAGCAGGCTCTG 531 37 97.3 35 ...................A................. GCGAAGCCGCGCACCTTGGCCACGTTGCTGGAGTT 603 37 97.3 33 ...................A................. ACCGAGCGGCTGGAGACGGAGACTGTGGTTTTC 673 37 97.3 0 ...................A................. | ========== ====== ====== ====== ===================================== =================================== ================== 10 37 98.9 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : AAACCCGTGGGGACGCTGGAGGCGCCGCATGGCACCG # Right flank : CTCGTGGTTGGTGACGTGCTTGAGCAGGAAGGTGGTCGCTCCTCATGAAACGCGAGGACTCTCTCTTCAACTGGTCCGAAAACCGGGGGTAGACCAACCGGCAGGTGACGACGTCCGAATCCGCCGTGGACGGCCGGCGCACGCGTCAGACGTTGGGCAGCGAAACGCCGCCCGACACCCTCCGCTTCATGAATCCGGTGGCTGCCGCTTACGGCATCGAACTTTGAGCCCGAGGACCCCGGGTGCCCCAGGGCTGGAGGAACACCTCCGTCTCCTCCAGGATTCGCGGCAGTGACGCGGTGAGTTCGTGGCCGTCGTCCACCTCCACCAGCCGGACGTGGCGCTTGCCCTCCGCCCACTGGCGCGAGTTCTGGACGTCACAGGTGTCATCCTGACGGCCGTGGATGATGAGCGTCGGGACGCGCACGTCGGGCCAGCCACCGGTGCGGGCGTCCACTGCCTCCGCGTCGGCGATGAATCCCGAATGGATGCGCGCCTTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : GTCGCTCCTCGTGAACGCGAGGAGCGTGGGTTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [16.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1335-14 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000053.1 Myxococcus virescens strain NBRC 100334 sequence053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 1334 36 100.0 36 .................................... CTTCAGCGAGCGGTCCCAAGCCTTCACGATGGCTCC 1262 36 100.0 34 .................................... GCATCCACGAGTAGCTGCGCCTGGGTGCTGTTGC 1192 36 100.0 34 .................................... AAGACCTTGCGGATACCCGTCACGGGCACCACCA 1122 36 100.0 37 .................................... TGAATCGGGAAGCCTTCGATGCGCTCGACCTCGTACT 1049 36 100.0 38 .................................... TACCAACCCTCCATCATCTCGGCCATCTCAGCGTGGTC 975 36 100.0 34 .................................... CCCAGGTCGTTGTTCCCCTTGAAGGTGAGGCGAC 905 36 100.0 34 .................................... GCGCCTTGGCAGGTTGGGCACGGCTCGGAGAACG 835 36 100.0 36 .................................... CAAAACTGGCAGGAGCTGCTTCGGCTGTACAAATGG 763 36 100.0 36 .................................... ACGCCCCAGGTACTCGATGTGACCGTGAAGCATGTG 691 36 97.2 33 ...T................................ CAGGTGGAGCGCGAGCGCGTCGCGACCATCACC 622 36 97.2 35 ...................T................ TGAGGCCGCTTGAGATGCCGCATCGCACGGAGTCG 551 36 100.0 36 .................................... AGGTTCTCAAGCTTCAGCGGGTACTTCTCGCTGTCG 479 36 100.0 35 .................................... ACGTTGGCGGATTCGGAGCTTTGTGTAGGTGCTTG 408 36 97.2 36 ...T................................ ATCCAGCGTGATTCGAACCTGGACAGGATCTCTTCA 336 36 100.0 35 .................................... CTCGGCCTGCTCGCCAGCCCGGACGCGCTGGGCAT 265 36 100.0 35 .................................... GGACGCCAAGGCCACGAGCTGCCAGCTCGAAGCCT 194 36 100.0 37 .................................... ACGAGCGCCAGAGCGCGGAAAGCATCGGGGATGAGCG 121 36 100.0 36 .................................... TCTCGGTCCCTTCGTTCCACAGCGCCAAACTTCGAA 49 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 19 36 99.6 35 GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : GGCGTGGGTGGAGGCCCGGCGCGCGGACAAACTGGAGCAGAAGCAGGTGTTGACTGTTTTCGAGACGGAGTGGCTGTCGCGGCTGGTCTCCCTGTCCCCCGAAGCGCGTGACACTGGGGCCAGGGCGCTGCGGTCGCTCGTCAAGAGCCCCAAACTCGAGGCGCGAAGGGACGCGCTGCTCGCTCGGATGGGGACGGACGTGGAGAGACGCTGAGGGAGCTGCTCCACCGCGCGCGGGGGGCGTTGTATGATGAATGACATTCAAGCACCTCGCCGTGGCGGAGGCCCGCGCCCTCGAAATGGACGATTTCCCCTGTTGTTTCGTGGGGTTGAGGCTCTTTGACAGGTGAATAGGTGCATGAACGATGAAAAGCTGAGTGATTCCATGGGGTTCGGATTTCTGGGTAGGGTCCGGGAGGCACAACCCTGGCGAAAGAAGGGGAGGTGCTTGAAAAGGGAGGTGGTAAGTTGGCGGAACTGCTGGGAGATTCAGGCGGGCT # Right flank : CACCTGGACTGCAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [8.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 1875-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000055.1 Myxococcus virescens strain NBRC 100334 sequence055, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 1874 37 100.0 33 ..................................... GGCTCTCGGGTGGGGCAGGAGGTGGACGAGCTG 1804 37 100.0 34 ..................................... CACGAAACCTTGCCCTGCCTGTCCGCCGTCCACG 1733 37 100.0 33 ..................................... CAGCAGACGACGGGCACCGACGCGGCCCGTGCT 1663 37 100.0 35 ..................................... AGCCGGGCCTTGCGCCCACCTGCACTGCTGGGCGC 1591 37 100.0 34 ..................................... AGAGGAATGGCCTTCGCCTTGGTTCTCACGCGTC 1520 37 100.0 34 ..................................... CGAAACCTCGGCACCGAAAGCCGTCATCCATCCA 1449 37 100.0 34 ..................................... GTCCATCAAGGGGGTTGCGATGGATGACGTGAAG 1378 37 100.0 33 ..................................... TCATGGGGAGTCCACGCGTCCAAACGTGTCGGC 1308 37 100.0 33 ..................................... CGGACCGCAGCACTCGCGGGGCCGCCCAACCAA 1238 37 100.0 33 ..................................... CAGATGGGGCGTGAAGCGCTGCGGAAGGTCTTC 1168 37 100.0 35 ..................................... GTATAGCGCCTGGTCCTCGCCGCCACGTAGCAGCT 1096 37 100.0 32 ..................................... CGGCCTTGATGCGTGGACTTGAGCGGGAGCGG 1027 37 100.0 36 ..................................... CTTTTGCTCCAGTGAAAGAGAGAGTTTGTAGTTGAC 954 37 100.0 33 ..................................... GCGAGATTCACAGCGTCACCAGCGGCCTTCGTG 884 37 100.0 34 ..................................... GGGTCTCCGTCAATCTGCTCCGGGTCGTAGAAGA 813 37 100.0 33 ..................................... CCGGGGAGGGCATTGGACCCCTACGGTGCGATT 743 37 100.0 35 ..................................... CACGACGACGCCGCGCAGACCCATCTGCCGCTCCG 671 37 100.0 34 ..................................... TACGCCGTCGCGGATCACAGCGTCCGGGTGTCCA 600 37 100.0 32 ..................................... CTCTTCCTCGCCCGTACCTGCCCAGGTTTCTC 531 37 100.0 33 ..................................... CCAACTTCATGGCCATGTCGGACGACGAGTTCG 461 37 100.0 34 ..................................... TTCGAGTACCTGCTGGTCAACTCCAGCAACTACA 390 37 100.0 32 ..................................... GAGCCCGAGCCCGGCGCACCGCAGGGGCCTTC 321 37 100.0 33 ..................................... GAGGCCGACGTCTCCCTGGCGCCGCAGGAGGCG 251 37 100.0 34 ..................................... CAGCACTGAGGACACCACGCACCGCGCACTCTCG 180 37 100.0 35 ..................................... ACCGGGTCGGCAGTGACGCCTCAAATCACCTGCTG 108 37 100.0 35 ..................................... CCGGTGCCCCCGGACTCGGAACGTGGCTCTTTGGG 36 36 97.3 0 ....................................- | ========== ====== ====== ====== ===================================== ==================================== ================== 27 37 99.9 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : TCCCTTCGCGATGCGCTGATGCGTAGATTGACCGTGCTGATCTGTTACGACGTGCGGGTGTCGGACCCTCAGGGGCCTCGGCGCCTGCGCAAGATTGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAACCCAAGGACTGGGTCGTCCTTCGCGCCCGCCTGCTTGGCGCGTTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAAGACGATGCCCGAAAGACGGAGCATCATGGCGCCAGGGCACCCTTGGACGTCGAGGGGCCGCTGGTCCTGTAGGCCTCCGCGAACCCGTCCCGGTGTACGCTCCGCCGAGGGTTCGCGCTCATTGAAATCCCGAATAGAATCATGGAGTTGGGTGAGTGGGCATAAGGAACGGCGAGGCGCTTTCGTGGCCCCGCGGGCCGGTTCGCGAAGTTCGGCCGGATTCCGTAGTCAGAACGGTATGTTGGAAGGGCAGC # Right flank : A # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 35-425 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000076.1 Myxococcus virescens strain NBRC 100334 sequence076, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 35 37 91.9 33 .....A................C........C..... GACATTCGCTGAGAGCACGTGGAGACGCTGCCC 105 37 94.6 34 ...................A..C.............. TGTGGCTTCAGTCGCTCGCAGGTCGCTGCGGGCA 176 37 94.6 34 ......................G............T. ACCGTCCAACCCCTTTCGCCGGCGGTCTCAATGC 247 37 100.0 34 ..................................... CCGAGTTCGCCAGCGGCCCGGTACAGCTCCGCGT 318 37 100.0 35 ..................................... GCAGCCTCGTGAGCGCGCGCTTCGCGCCATAGGCG 390 36 91.9 0 A...A.............-.................. | ========== ====== ====== ====== ===================================== =================================== ================== 6 37 95.5 34 GTCGCTCCCCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : CCGTCGCCAGGAACGTGCGGATGTACTCCACGAGG # Right flank : CACGGACGCCCTCGTGGCCTCGACAGGGCCGGTTGCCGCCTCGCGGGTGGCCTGCTCGACGTGTCCGTGTCACGCGCCCCAAGGCGACACGGAGGGCTCGGTGTCCGTGGCCCTCTGTCGCTACGGCTCGTCCGCCATGTCTTCGAGCTGACCTTCCGCTATCTCGCGGTAGAGCGGTACGACTTCGACAGCGAGCACATCCCGCATTTCCTGGCGGGCGCTGTCGAAGTCACCGGCCGCCTTGTGTTGATACATACGGTTCAGCGCATCGGAGATTCTCGCGGAGCCGTCGCGGATGCGGCGCGCAATCTCGCGGAGCAGGTCCAACGCCCCGTCCTCCGTGGACAAAGCGCGAGAGGCAACCGCATCGCTGATTGCCACATCACGTGCCGAGCGAGCAAGGAGCGCACACACTTCGTCCGTCAAGGCAAGTGGCGCCCCCTCGCGAAGGACGCGCCGCGCGAGTGCTCGAATGGGGCCCCAGTCAAGTGTTTCGGGCA # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [20.0-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 15180-16422 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000077.1 Myxococcus virescens strain NBRC 100334 sequence077, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 15180 37 100.0 36 ..................................... CACGAGGAGGGATGCGGTGCCGCCCACGCCCGCGAG 15253 37 100.0 34 ..................................... CGGTCGAACGCCATCACCCCTCCTCGCCCGGTTG 15324 37 100.0 33 ..................................... GCGCTTAATCTGCATGTCACCACTCCATCCAAG 15394 37 100.0 34 ..................................... AACACGGGGAGTCCCGGCGGTTGGGCGCAGCTCC 15465 37 100.0 35 ..................................... TACCAGGGCCGGCACGACACCCATGCGCGACGGCA 15537 37 100.0 33 ..................................... TGTTCGTGCCGTTGTTGCTCGCCGGCTGCAAAA 15607 37 100.0 33 ..................................... ACTGCGCAGCGCATTCGAGGCGACCTCGACTCG 15677 37 100.0 33 ..................................... CCTCATGATGCGATGTATGTGACGCAGGCGGCG 15747 37 100.0 33 ..................................... ACGATGGCGACCTGATTGCGCATGACGGCCTCT 15817 37 100.0 33 ..................................... CCTCGTGGCCGGTGACGGTGCGCGCGTACCGCG 15887 37 100.0 33 ..................................... CGTGAGCGAACGGCAGCCGCCGTCCACGCGCAG 15957 37 100.0 34 ..................................... CTGGCCCGTTTACGGACCCAGCCCTGCAGCTCGG 16028 37 100.0 33 ..................................... GACTGCTGGATAGAGCAGACAGCCGATGACCAA 16098 37 100.0 34 ..................................... TGCAGCAGGTCTTGGTCCTCGCTCGTGAATTCAT 16169 37 100.0 36 ..................................... TCTGCGAGCCACATCCACACGCGGACCATGCGCAGC 16242 37 100.0 32 ..................................... CACCAGGTGGCGCGTTGTCCGCAGGCAGGTAC 16311 37 100.0 38 ..................................... TCCGTCGCCTCCGCCAGCTTCTCTCCCACAGTTGCAAT 16386 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 18 37 100.0 34 GTCGCTCCCCGTGAACGCGGGGCGCGTGGGTTGAAAC # Left flank : TTGTCTTTCCGCGCGCTGAAGCGTTTCCTCCAGCGCCCCGACTCGGTCCTCGAATCCACCGGGCAGTTCGCTGGTGACCTCGATATTGTCTTGATGTCCTCTGGTGGCCCCCCCACCAGCAGGCACGATGCTGTCCATCTCCAGCACTCGACGTCCATCTGCCTGTCATCCCCCCATGTCCTGGAGCAGCTCTACATCCCGCGCAATGTTCGCATCGTCCAGCGGTGCCAGTTCCCGTCGGAAGATGGCTCGAGGAAGACGGGGCATCATGGCGCCAGCGGGCCTCTGGACGTCGAGGGGTTGTTTGTCATGTAGTCGTCGCCCGCGAACCACCCCCAGTGCGCGCTCCGCCGAGGGTTCGCGCTCTTTGAAATCCAAAATAATTTCAAGAAGTTGGGCGTGGACGCACGATTGTCGAGGCCTCCGAAGCGTGGGCGCCGAGGCAGGTTCGCGAAACCGGGCCGGATTCCGTAGGAAGAACGGTATGTTGCAAGGGTAGG # Right flank : CGTACTCCCCGCCCGCCGAGCTCGTCACCCAGGCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGTGAACGCGGGGCGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.00,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 2138-2461 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000070.1 Myxococcus virescens strain NBRC 100334 sequence070, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================== ================== 2138 33 97.0 42 ..T.............................. CACCGTCCTTCCACGGACGCCGACAAGGCGCGGTGGCCCGAG 2213 33 100.0 42 ................................. CACAGCTTGAGTGTGTTGATGACAGGCCCGCCATTGGCGGGC 2288 33 100.0 37 ................................. CACTCCGCGTTGCTCCCCTGCAACACACCGTCGCTGA 2358 33 93.9 38 ..........T................A..... TACAGGCCCTCGCAGCCCTGCTTGAGGAAGCGCTCGAA 2429 33 90.9 0 .....................A.G...A..... | ========== ====== ====== ====== ================================= ========================================== ================== 5 33 96.4 40 GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAG # Left flank : GGCTTCTCGCGCTTGCCCAATCAACGCGAAGAAATAATTCGAAACATCGTGGGGAGCTTCGTAGCTGCGTGTGCATCAAAGCGTTTCTGCGAAAGGCTGACCATTGTCATATCGCCGAGCGATTACCGAACTTTCGGCATCGATCTTCAGAAACTCGGGCGCTTCGTGGAACACATCTGCATGTACACGCCGTTTAGCTCGCCTCAATCCGTCGGTGCTGGCCAGCCCGTTCCCGCTACGCGACAGGTGGCTTAGTTCGCGTGTCGTAGTGGGCCGACGTGGTGCTCACCGTCGCGCTCCGGCAGTTTCGGCCAGAGAAGAGTGCCCTAGCAGTTCCGGCCCGAGGGGGAGCGCGCTCCGCGGGTGTGGCTCTCATCCTGAGCGCGCTTCGAGAGGAGCCTGCCGCCTGCTTGGTAACCAGCCTTGGCGTAAAGGGTTGAAGTCACGAGGAGATTCCTGGTTGCTCAGGATGAGAGCCGCACCCTGCTCCGCAAGCTTCC # Right flank : GTGTTGCCGCGCACGTTGGATGATGAGCTGGAGAGTCGCCTGATTAATGGCATCGGGACTACGTTTCCCCATTCGTGTCACGGCCTTCGCCGCCTCCGGTGTCCTGTGGGCAGCTCTAACTCGGTCGGAGAGCCGCAGAATGGCAGCAATCAGTTCCGCATCTCGCGGAAACTGCTGTCGCGCCAATGAACTGGGTCCCATCACGAGCGTGAACCCGGATGGTCCGGCTCCGTGATGGCATTCTCGAAGCCTCCAATTGAGAGCTTAGCAGCCAAGGCGCTCGAAACAGGGCGTCCATCCATCAACAAGCGTGCTCAGCACTAGGTGAGGCCGGGCCGGCGTGGGCCAGATTGATTGGATTTCAAGTTCCTTCTGATGTTCATGGTATAGCCTGCTGTGTGACGGAAATCTTTCCTGGGGGACTTCCTCTTGCTTCGATGGATGGCGCCGCTGCTCTTGGTCGCTGTCGTCACTGGCTGTGCGACCACTCGAGTCGTGCG # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGGAAGGCGTTGAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 23195-24240 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000070.1 Myxococcus virescens strain NBRC 100334 sequence070, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 23195 36 100.0 35 .................................... ACGAGCCCAACGTTGACCATGGTGTTCAGGTTGAT 23266 36 100.0 39 .................................... TCGCTATCCAGGTGCGCCATTTCCTCCGCGAGTTCGGCA 23341 36 100.0 34 .................................... GCCGTGCGGAAGTCGCAGCGGGACTTCGCGGTGT 23411 36 100.0 36 .................................... CGCCGGACGGTGACGGTGGCTTGTGCGACGGGGGTG 23483 36 94.4 39 ..........T....................G.... AGCCAGAAGTCGTTGGCGTTCTGGAGCTTCACCGGCTTG 23558 36 100.0 37 .................................... TTGACCACCACGTCGAGGCGTAGGTGGACCCAGGTGT 23631 36 100.0 34 .................................... CACACCCTGCGGCGCACGAAGGAAGATGTATGGG 23701 36 100.0 33 .................................... TCGGCGTACAGGTCCAGCCCCGCCGCCTTCTCG 23770 36 100.0 37 .................................... CATGAGTCGGTAAAGGGGGCGGTATGCGGATTAGTCG 23843 36 100.0 36 .................................... GTGGCTGCTACGTCGAGACCCATGACAGCGTCTGTC 23915 36 100.0 35 .................................... CGGGTATGGCTATTTCGAGGCAGCCGACACAATCG 23986 36 100.0 40 .................................... TCTTCAAGAAGATGAAGGGCGGACCCGGAGGGACGCTTTG 24062 36 100.0 35 .................................... CTCTGGGCCAGGGGTTGCAGCGCTTCCTTGCTGTA 24133 36 100.0 36 .................................... AACGAGGCGGAGAGAAAGCGATTCTATGAAGCGCGG 24205 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 15 36 99.6 36 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : CGACCCGCGGCGGTGGCGGAAGGTTCATGCCCTGCTGAAGGGGTATGGGGAGTGGTTGCAGCTCTCCGTATTCCGTTGCTCGCTGACGGACCGGGACCGGGAGAAGCTGCGCTGGGAGCTGTCGCGGCGGATGGACGCCGTGGATACGTTGCTGGTGATTGGGCTGTGCGGCGGGTGCGTGGAGCGCGTGCGCGCCATCAACGCGAAGGAGGACTGGCCGGAGGAGCCCGCACCGTTCAAGGTGCTGTGAAGCAGGCGACAATCAAGCACCTCGCCGTGGCGGAGGCCCGCGATGGCGAAAGTGGCGGATTCCCCTGTCGTTTCATGGGGTTGAGGCTCTTTGACAGGTGAATAGGTGCATGATCGATGAAAAGCCGTGTGGTTTCATGGGGTTGGCGATTCTGGGTAGGGTCTGGGATGGCCAACCTGGGGGACGGAGGGGGAGGTGCTTGAAAAGGGGTTTGTAAGGTGCCGGAATTGCTGGGAGATTCAGGCGGACT # Right flank : CGGAACCCCCTGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-6.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 39-1285 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000009.1 Myxococcus virescens strain NBRC 100334 sequence009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 39 36 100.0 32 .................................... TACCAGACGCACCTGACCCACTCTGGCACTCG 107 36 100.0 35 .................................... GACTTTTCTTTCTTGAAGCGGCTGGCTCTGATGAA 178 36 100.0 38 .................................... ATGCGCGTGGCTCCGAGCTTCTTCCGGAGGTTCTCCAC 252 36 100.0 33 .................................... AGTCGGCCCTGAAAGACGGTCCACGCCTCAATG 321 36 100.0 36 .................................... AAGAGGTCTTGCCCTTCCTTGAGATGGGGCACGCCT 393 36 100.0 34 .................................... TCGGCCGGGCGGTGCCCTCCACGGGAGGGGGCTG 463 36 100.0 36 .................................... GCCTGGGCCGCGTTCTCCGTCGTCAGGAAGCGCTGG 535 36 100.0 35 .................................... ACGGACTGCACCGCGCCGACGATGGCGTTCCACGC 606 36 100.0 36 .................................... GCATCCAGGGTGTGCGTGCTGGCTTCGCGGTAGCAC 678 36 100.0 36 .................................... AATCACTTCTGGGGTGGGAGCCCTCGAACCCCCCTG 750 36 100.0 34 .................................... GCAGCACCGAGGGGGATGATCTCTTGCTTGATAC 820 36 97.2 36 ...............G.................... GCAACTGGCGCGGACTGGCGTAGAAGGAGCCCAGGA 892 36 97.2 36 ......................G............. GCATTGGCGTAGTTGATAATGAGGGGCACGGTAACG 964 36 97.2 33 ......................G............. CTGTTCGTGATGGTGGCGGAACGCGGATTCAGC 1033 36 97.2 36 ......................G............. TCCAGCTCCACCTTGCGCATCTGGGACGGGCCCGGG 1105 36 97.2 36 ......................G............. CCGCAGCTCCCGCCGCATCCTTCGGGGCCGCAGGAT 1177 36 94.4 35 .........T............G............. CCGACAACGGGTTGACCGCCACGGGGCCCACGGGA 1248 36 86.1 0 ......................G......G.T..CT | CC [1276] ========== ====== ====== ====== ==================================== ====================================== ================== 18 36 98.1 35 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : GGGAATACGAGGAGTGGGAGGAAGAGACGGATGACGAAG # Right flank : TCCTCCTCGGGCAAACCTCACGAGGTTCCATGGCCTCTTCGCTCCAGGCGATGAACTGCGGCCATTTCTGGTACCCCAAGCAGGTGTGGAGGGGGCCAGCGCGGGCTGCGCGGCCTGTCCACCGGCCTGAAGCATCCCTCGGGCGGCTTTGTCAGCGCCTCTCCTCGGACCCTCTGCTTCCTCCCCTCCACGGGGCCCCTATCACTCTCATGGGGCATCGGGAGGCGGCCGTAGTCAGACAAGAGGGGCGTCATGAACGCCCCTTGCTAGCCCGCAGAGTCTTCAGCGGAAGCCAGGTGTCGTCCTTCATTCCTTATGTCTGGGTATGACGGCTCCCTACCTTCCTGCGAGTCAGCCATTGGAACTAGAATCACGGCAGCAGTCCAAGGGGGGAATATGGTGCTGGTGGACGTATGGGAAGAGCATCTTGACGAAGCCTCCTTTCACTGGGAGCAGTGGGAGCGAGCCCTGGTGGCTCCCGACTTCACGCTGACGGAGAC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : GTCCCGCTCGCCGTGATGCCGAGAGGCGTTGAGCAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 6984-7608 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJVY01000009.1 Myxococcus virescens strain NBRC 100334 sequence009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 6984 36 100.0 38 .................................... GAGAATTCATGCCGGGGGTTCGCCTTGCGCAGCGTCAG 7058 35 97.2 34 ..................-................. ACGCCGTTGGTGCGCGTGACGCCGCCCAAGACGG 7127 36 100.0 36 .................................... GAGAAGCAGTCCACCCAGGACTTCAATCTCGGCTTC 7199 36 100.0 40 .................................... GAAGGTGGGGCGTCCTCTCGCACCAGGTGCCCCGCGTGGG 7275 36 97.2 39 .....A.............................. GTGAGCACCCCTGTCGGGCAGATGGCCTTCGCGGAGCAA 7350 36 100.0 39 .................................... TTGTGGAATCGGCGCTCTTGAAAGGATAGCGCAGGTAGT 7425 36 100.0 40 .................................... TCCGCGACGGTGTTTTTCCCGCTGTCGCGACGCCCCAGTG 7501 36 94.4 36 ......T................T............ TGCTCAAGCATGAACCACTCATTGAGGGAGAGCTTG 7573 36 88.9 0 ........T..............C........CT.. | ========== ====== ====== ====== ==================================== ======================================== ================== 9 36 97.5 38 GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Left flank : GCTGACTGTCCTGTTGTCCAGGCGGACCCAGAAGAGCCGTTCAAGAACGAGGACCATATCGTTCCCCTGTATGGTTCCTTGAAGGACATGCTCTTCCTGATGGCCTTCAGCAGGAAGCGGATGGCCCTTCTGGAGCATCGGCGACGGTTCCTCCCTTCACTCGTGAGCAGCGGAACGGGGAATGTCCGAATCGTGGCTCCCTCCTTGGTGGGAGCCATCGACGAGACGCTTCTCCAGCTCGGCTTCCAGAAGCTGCCCTATACCAGCCCACTGACTCCGCTCTACGAGCGCGGTGATGCAGCCTTCTACGTCGACCGTTCTTCACAGGGAGGGGGACTGTCCGCCGAGTTGGCGGCACGAGATGAGCGTGAATTCGGGAGGCTGGTCGAAGTCATCCAGGATTCTACGACTCTTGTATAGTATTACCCGGTCAGGTGCACCAAGCGCGGTCGCCCCGTGTTGACGGATACGGGCGCCATTGCCATCCCAGAGGACGGCAA # Right flank : CCCTGTCAGAAGATCTTCATTGTGGCCTGGGCCAGCCATGAACGCAGCGCCTCGCCTTCAACCCGGACGGGAGCGTTCTCGTGACCCAGATCAATCCAGGAGGCCTGGGTCGCCTGTAATCCGGAGGCGCCGCGGAGATCTGCCCCAGAAAGCCTCGCTCCATGAAGGACCGCGCCTTCCAGATGAGCATCTCGGAGATTCGCGGACGCGAGGTTGGCACTGACCAGGTAGGCGCCTTGAAGGTCCGCGCCTTGAAGGTCCGCGTCTTGAAGGTCTGCTTCGCTGAAGCTGGCTCGGAGCGCGTTCACCTGCGTCAGAATGGCCCCTCGAAGGAGCGCATAGTCCAGGTTGGCCTTTGACAGCTGCGCCCTGGAGAGGCTGGCGCCGATGAAAGATGCGGACGCAAGGTTGGCGTGGGCAAGCTTCGTCCTGTCCAGGATGCATCCATCCAAGCGCGCCCCAGGAAGCGCTGCCTCCGATAGATCTCTCGACGACAGGTT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCGCTCGCCGTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //