Array 1 60457-50587 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFHI01000014.1 Rheinheimera sp. A13L DRAFT__contig00021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 60456 28 100.0 32 ............................ CAAACGCAACCATATCTGATCCAGTAATTAAC 60396 28 100.0 32 ............................ AGCATAACGCTGGATTTTCTTTGTGTGCTATC 60336 28 100.0 32 ............................ TGCAAATATTGTGATGAAAGACGGGAAATGAC 60276 28 100.0 32 ............................ TTCTGACCCTATGCAACTAACTAAGCCTGAAA 60216 28 100.0 32 ............................ TTTAGCGTTTACCGTGGCGTTCATATCTCCGC 60156 28 100.0 32 ............................ TAAATCAACTTGATGCACACGACTGTCATTGC 60096 28 100.0 32 ............................ ATTAACTGGTATGGCAGTATCTACCATTGCTC 60036 28 100.0 32 ............................ GTGATTTTGCAGCGTTTATGCTGGTTGCTTGT 59976 28 100.0 32 ............................ ATGATTAGCGCATAGTCGTATACCTGATTTGA 59916 28 100.0 32 ............................ TTAATCACTGAAACGCCAGAAAGTGAAATACC 59856 28 100.0 32 ............................ AGAAGATAACAAACGAACCACAACTTCATCAG 59796 28 100.0 32 ............................ AGTGAACATGAGCTGAGCGCCGTTCAGGTTGT 59736 28 100.0 32 ............................ ACAACTTCATCAGTTGAGGCATATGCGGTAGT 59676 28 100.0 32 ............................ AACAGCTGACACCACATCAAACGCAAACGGGT 59616 28 100.0 32 ............................ GCTGGCATTCTTGATTGCTTGTGCTCCGCCCT 59556 28 100.0 32 ............................ TTAACCGCATTGCGGTAATCAATCGCGGCCTG 59496 28 100.0 32 ............................ AGACGGCCCGCGACTTTGCCAACCAGAACCGT 59436 28 100.0 32 ............................ AAGCAAAGCAAATTGAACTTGCAGCGCCTAAA 59376 28 100.0 32 ............................ TGTGCTGTAAATTTTATACTCTGCTCCAAAAC 59316 28 100.0 32 ............................ ATCATCAACAAAATAAAAAACCTCAACACCAG 59256 28 100.0 32 ............................ TAGGGAAAGCTCGCGCTTGCCGCTTTCAACGT 59196 28 100.0 32 ............................ TACATCGTCGAGTCCTGCACCTGTCTTTGCAA 59136 28 100.0 32 ............................ AGAGAGTTGGCCGATTTGCTGCCAAAGCAGTA 59076 28 100.0 32 ............................ AAGAAACAGGTGTAGGCAATCAAAACGCTTTA 59016 28 100.0 32 ............................ GTGATACTGTTAGCTTCTTCTCGGCCTTTTAT 58956 28 100.0 32 ............................ ACGGCAACTGCGTGACCAATGAGTCACTAAAC 58896 28 100.0 32 ............................ TCTATGCCTTATGCGGTTTTGCCGTTTGACAA 58836 28 100.0 32 ............................ TGTCCTTGCAATAAACGTGCGCCTTGTTGTTA 58776 28 100.0 32 ............................ AACGCATTTAATGTCATATTCGTTATTGTGGT 58716 28 100.0 31 ............................ AACCAAAGCGGGATAACGTCAGGGAATACAG 58657 28 100.0 32 ............................ ACGCTCCATAGCTGCTACAGCTTCGTTTTTAG 58597 28 100.0 32 ............................ CAGCAACGTATATCCCCTTGTGTTATCCACGC 58537 28 100.0 32 ............................ AGAGCAAGAAAAGGCAAAGTCTACGGCCGTTA 58477 28 100.0 32 ............................ GCTTCGGTGATTCGGCGGCGCGTTGAGCCTTC 58417 28 100.0 32 ............................ AGCCTTAACGCCTGTCTGAGTGCCGACAAGTA 58357 28 100.0 32 ............................ AGCGACCAAACCAGTCAACCATAGACGCACCG 58297 28 100.0 32 ............................ CATATCTTGAACGGCCTTGTGCTTATTCCAGA 58237 28 100.0 32 ............................ GCACAAGCGCCCGTGTCTTATTTGGAGGATGG 58177 28 100.0 32 ............................ AAGCTCCTTCTGGCCCTCCCTGTGTTCTTTGG 58117 28 100.0 32 ............................ AACGGGATAATAACGACTGAGCGACACTATCT 58057 28 100.0 32 ............................ ACGGACGAAGAAGGCGAAGATCCAGAAAAAGA 57997 28 100.0 32 ............................ ACTGAATGCCGTTGATTATGGTGTCTTGGTTT 57937 28 100.0 32 ............................ ATGTAGAAGTCCAGCCCTTTGTTGATGAGTCC 57877 28 100.0 32 ............................ AGTCAGCAAATGAGCTTAGTGCGCCACCCACC 57817 28 100.0 32 ............................ AACATCACTGTGCTTGCCAACGTGCTTGGACG 57757 28 100.0 32 ............................ AATTTACCGCCCATGCGATCAAATAACGTATC 57697 28 100.0 32 ............................ TGATGGCGAACACCGCCTAGCTTTGTTGGATC 57637 28 100.0 32 ............................ ATCCCTTACGCGAAAGAATAAAGCAGAATAGC 57577 28 100.0 32 ............................ TATGACTTAGACGCCACTCGTTTAGAATCGAT 57517 28 100.0 32 ............................ TCAATCATTGGCGTAACTTTGTTGCAGCGCCT 57457 28 100.0 32 ............................ TGTCTGCTCAAGACCTTCTTGATGAATGCACA 57397 28 100.0 32 ............................ AGTCAGCGCAACAGCATCACCATCAACTGACA 57337 28 100.0 32 ............................ CGATTGTGGGCCTAGTGCAGAGGTTAGCCCTG 57277 28 100.0 32 ............................ TAGTTTGATGTACTACAGTGATGAATTAGACC 57217 28 100.0 32 ............................ TGACCGATGTTTATAAACTCCGGATGCACCTG 57157 28 100.0 32 ............................ TCCAACGTTTTGCACAAGGTTTCTAGCGTCAC 57097 28 100.0 32 ............................ AAGATGGAAGAAATCTGCCGGCGTATTTACCG 57037 28 100.0 32 ............................ AATAACAGCACCAGTCTGAGAATGCACTGCAG 56977 28 100.0 32 ............................ TGGCTCATTTGGTGGCCAGCGTCTGAACTGTA 56917 28 100.0 32 ............................ AACTGGACTGGTGGGCGTGCGAAAACGTCACC 56857 28 100.0 32 ............................ GCCAACTTTCGGTCTATCTCCGGCTTGGTCAT 56797 28 100.0 32 ............................ AAGCCAGTGGAAGTCCGCACTATCACAGTAAC 56737 28 100.0 32 ............................ GGGATAGGCGAACTGCGTGATCAGCGTCACCC 56677 28 100.0 32 ............................ ACCAAGTAAATAGACTTTAACGCCTACGTGAC 56617 28 100.0 32 ............................ CCGGCTGCGGTAAACTCTGGCGCACTCATGCG 56557 28 100.0 32 ............................ CAAACAGAACGCAAAGCTTCATTGCTGTTTCT 56497 28 100.0 32 ............................ TGCAGCAACTGCCACCAGAAAACCAACAGCGA 56437 28 100.0 32 ............................ AGCTTTCCTGAATATGCCGAACTGGTGCAATA 56377 28 100.0 32 ............................ AGACATTAACGACTTTATTTCTTCAGCATCTT 56317 28 100.0 32 ............................ AGGGGAACCAACACCCAGTAATTTACGCTTAA 56257 28 100.0 32 ............................ AATACAGAGCCGCAAAGCTAGGAGCAAGCGAA 56197 28 100.0 32 ............................ GCAATCGACCAACTGCCATACCAAATCCCATA 56137 28 100.0 33 ............................ AAATGAGCGTTGGTGAAGCATTCGCCGCTATTT 56076 28 100.0 32 ............................ ATGCGCTGCCAAACTTTACCCTCGGCTTTAAT 56016 28 100.0 32 ............................ TTCTGACGCTATGCAGCTAACTAAGCCTGAAA 55956 28 100.0 32 ............................ AAGTCAGGCTTGCAGGAATGTTGATGCCAGCA 55896 28 100.0 32 ............................ ACCAGTTCCTGCAACTGTACTGCCGGGCGGAA 55836 28 100.0 32 ............................ TAAGCAGACGATACCAGAAGGCCCGACAATCA 55776 28 100.0 32 ............................ ACCATATCCAAAGAATAAGCGCCACAATAGGC 55716 28 100.0 32 ............................ TCCACGAATAAGATTTTACTTAGCCTGAATAG 55656 28 100.0 32 ............................ AGTGACAATCCTAATGCGTCCATATCTGACAA 55596 28 100.0 32 ............................ TTCTGACGCTATGCAGCTAACTAAGCCTGAAA 55536 28 100.0 32 ............................ GGAGAACCACATGAATCAACCAAGCAATCCTT 55476 28 100.0 32 ............................ ACCTAGATCTACGAATTAAAAAATCAAATACC 55416 28 100.0 32 ............................ GCCTGATGCTATAGCGTTTAGCATCAGGTACA 55356 28 100.0 32 ............................ TTCGCCCATTGATGAAAGCTCAATAACATCTA 55296 28 100.0 32 ............................ CCGCTGTATTGCTGATCGTTTGTGCAGTCCAC 55236 28 100.0 32 ............................ AAGTCAGGCTTGCAGGAATGTTGATGCCAGCA 55176 28 100.0 32 ............................ GAACCTGAACACCATCTCTTGGTTCGCAAAAT 55116 28 100.0 32 ............................ TACTGGTGATTTGGTTCACGTTGGCCGAGTCT 55056 28 100.0 32 ............................ GTGCGGACAATCTTGTGGCTCGGCTCGATAGC 54996 28 100.0 32 ............................ TACGCCAGATACAAAGCTGACAGTGGTAGGAT 54936 28 100.0 32 ............................ ATAGACAAAATCTTTATCGCACATATGAATTG 54876 28 100.0 32 ............................ CGTTGGAGAAATAATTATGGCTCAAGCATTTA 54816 28 100.0 32 ............................ ATACTCAAACTCCTAAATTAATTATCTTCGCT 54756 28 100.0 32 ............................ CAATACCGGTGCTGACCGCTGTCACACAAACA 54696 28 100.0 33 ............................ GAGAAGCTACCACGCCGCTGGTGGCAACTCAAA 54635 28 100.0 32 ............................ AGCCAGCGCACAACTGCATGTAGTCGGTATTG 54575 28 100.0 32 ............................ TGTCGCCGCTTTGAAGATTACGGCGCTGTATT 54515 28 100.0 32 ............................ ATAGTATGTTTACGAAATCCGCTTTTATTGCG 54455 28 100.0 32 ............................ AATTTACCGCCCATGCGATCAAATAACGTATC 54395 28 100.0 32 ............................ TACAACGGTGACGGCACGTTTGCTAGCACAGA 54335 28 100.0 32 ............................ TAGATTAGGGAACTCATCTCTAACCGAATAGT 54275 28 100.0 32 ............................ GTATCGGATAGGCTCTGTGCTTAATTTCTGGT 54215 28 100.0 32 ............................ ATACAGGATTTAAACGAAGTTATAGCGCCGTT 54155 28 100.0 32 ............................ CTATCTATTCAGGAGTTTACTCTAATGTCCCT 54095 28 100.0 32 ............................ ATAACAAACACCAAACCAATAAACTGAAAATA 54035 28 100.0 32 ............................ TGGACAGAACGGGCATACGCGAAGCCATTGGC 53975 28 100.0 32 ............................ GGCTCGAAGGTCAGCTGGTTGAGATAAAAAAT 53915 28 100.0 32 ............................ ACCCACCATTCAAGCGAATGCGCTGAGCATGA 53855 28 100.0 32 ............................ CAGAAGGAAAAAACCAATGTCACGTTTTACTA 53795 28 100.0 32 ............................ AGCGCCATGGTGAACGAGTTGATGCCTCAGAA 53735 28 100.0 32 ............................ AAATATTGCCAGTGTGTAGCCCACACGGGCCT 53675 28 100.0 32 ............................ ACAAAAGCGCTGCAGGTGATTTGGTTGATCTG 53615 28 100.0 32 ............................ AAGTATTGACGATGTAAGAGCTCTTGATGGTA 53555 28 100.0 32 ............................ GCCACAAAGGTTATGACGTATTTTTAGTTACA 53495 28 100.0 32 ............................ TGAGTCACCGCCAGGCGCGCCCCTTTCACCAC 53435 28 100.0 32 ............................ AGACCAATGTAATTGCTACTGGTTTAACAGGT 53375 28 100.0 32 ............................ AGGTTAAATGCTGTAACAGGCTTTGATTTTGC 53315 28 100.0 33 ............................ CTTTGGTTTCCTAAACAGCTAACAACTCATTTT 53254 28 100.0 32 ............................ TGTGTTTTTGCCGTCATTGTGTTGCTGCATTT 53194 28 100.0 32 ............................ TCATTATTCCGTGACAACTCACTGCGGTTTTA 53134 28 100.0 32 ............................ AGGCTGATGAAACCGACATGGGCTTTTTAACT 53074 28 100.0 32 ............................ TGGTGTTGGTCAATCTTTGCCATTTTTCCATT 53014 28 100.0 32 ............................ TCCACGCCAGACGGTAAAACAGGGCCATATTT 52954 28 100.0 32 ............................ AGAATCACAAATACCGAAGATTCATTTTTCAA 52894 28 100.0 32 ............................ GGAAGGTGTAAAGCTGGCAACTTGAGTAACTA 52834 28 100.0 32 ............................ TTGACCTGAAAAGGGGCTGCAGTCGCCACAAT 52774 28 100.0 33 ............................ GAGTGCAGCAACAATGAGCTGGGGCAGCTTCAT 52713 28 100.0 32 ............................ GCGAACCTAACCTGGTCATAGAAGATATCGCC 52653 28 100.0 32 ............................ AGAGAATGTGCCATTCAATAGAGTTTGGTTAA 52593 28 100.0 32 ............................ AGCAACGACGAAAAAGCCGCTGCCAGTATTCA 52533 28 100.0 32 ............................ AAACTATCTTCAATAGATAGTGGAATTTCAAA 52473 28 100.0 32 ............................ AACGGCCACACATTTAACGGAATTCACGCTTA 52413 28 100.0 32 ............................ CGGACATTCGTAAAGTCTTTGCTGGCTTCCGG 52353 28 100.0 32 ............................ TGCAGCGTCAATCCGTTCCCAGGATATAAGCC 52293 28 100.0 32 ............................ ACCACTGGCCTTAATGGCCTCAGCCATACAGC 52233 28 100.0 32 ............................ TATCGCTGCCATGCTGCCCGAAACAACACCGC 52173 28 100.0 31 ............................ AAAACCATAGGCGCTGATGGGCTGGTTAGAA 52114 28 100.0 32 ............................ AAACCCAAGTAATTGGGCGCTTAGCTGTCAGG 52054 28 100.0 32 ............................ TGAGTGGCGCAGGGCTGTTGAAAGTGCCATTG 51994 28 100.0 32 ............................ AAGACTTTAAACACTTCTGCACCGAACACTTG 51934 28 100.0 32 ............................ TTCCTGAGCGCGATACCAGTCGTTAGGCATAT 51874 28 100.0 32 ............................ AGTAGGACCATAAGCACAGAAAATAACTCCGT 51814 28 100.0 32 ............................ GTCATCAGTGACGGGCCTTTCAATTGAGACAA 51754 28 100.0 32 ............................ TGTTGACGTTGACGGTTTACGAGACGCTTTAA 51694 28 100.0 32 ............................ TTGAAAGCAAGCGCGCTGAATATCAAGGCCAT 51634 28 100.0 32 ............................ AGGCACTGACTAACATAATTGCTTTTTATACG 51574 28 100.0 32 ............................ TGCAACTGGTGCGGCAAGCCTGTGCCGGAATC 51514 28 100.0 32 ............................ CGAATCACAATTGCCGGATCTAACCGTACCTC 51454 28 100.0 32 ............................ ATAAGCAGCTGATATACCGATGATGCCGATAA 51394 28 100.0 32 ............................ TCTTCGCCAGGGTGAACAACAGTAATCGGCTT 51334 28 100.0 32 ............................ CCTAAGGGGAAAGACTATCTGGCGGGTAAGTT 51274 28 100.0 32 ............................ TTGAAGCTGATGTATGTGTCGAATCAGCACAA 51214 28 100.0 32 ............................ TGAAGCGTAAGGGCGTTTCCGTGTATCACTTC 51154 28 100.0 32 ............................ AAAATCAGCGGCACTGGTCATCAGGTCTTTCA 51094 28 100.0 32 ............................ TGGTATTGTCGCCACGATTGGAACGACTAGCC 51034 28 100.0 32 ............................ TGTTTCTGGCGCCTATTAAGTTGGTTTCATGC 50974 28 100.0 32 ............................ ATAGCCGAATCTTTATCAGGCACAATTCCTGA 50914 28 100.0 32 ............................ ACAATAGACCGTCGTATCGCTGAGCAGACACC 50854 28 100.0 32 ............................ AAAGCGGGTCGTTCATTCTGCGGGGCGACGTT 50794 28 100.0 32 ............................ GCACAAACTCAGTGGCCGACTCGCCATATTGC 50734 28 100.0 32 ............................ AGTTAATCCGGAAGTTTCGGAACAGTTCCCTG 50674 28 96.4 32 ...................A........ TACTACAGCGGCCAAAACCGTATTGTTGACTA 50614 28 85.7 0 ......C.....C...A..A........ | ========== ====== ====== ====== ============================ ================================= ================== 165 28 99.9 32 GTTCACTGCCGAACAGGCAGCTTAGAAA # Left flank : TGGAAAAGTTGATGGCTGAAAATTGGCTGAAAGGACTCAGAGATTACAGCCAATGCAGCGCAGTACTTCCTGTACCAACGGATGCTAAGCAGCGCTATTTTGCCAGGCGGCAGTTGAAAAGTGCGTATAACAAACAACAGCGATCGGTGAGCAAAGGTTGGTTAACGCAAGAAGAAGCCGTAGTACAAATTAGTGAGCAGTCGTCAAGATTGCTGAAGTTGCCATTCATACAATTGACCAGCCGTGGCAATAAACAGCAAATGAAAGTGTTCATCGAGCAAGGACCGATAGTTGATCATCCCACAAAGGGCGGTTTTAACTCCTATGGTTTAAGCCGGTTATCTGAAAAAGTAACGGTACCCTGGTTCTAACCCTTTTTCTTACGACTAGCTGCAGCCTTTGTAATCTAAGGGCTGCTTTTTCGTATAGTAAAAAGGGTTAATTAGCAAATAACGACTATAGCTCTTTAACAATCAGGTTCTTAGTGCTTAAATGCACTA # Right flank : TACAGAGCATGAAGCTCCGTTGTTAGCTCTTGGTTGACCGCCGCACCAGCACTCGCGTCGCGTCCCGCACAGGGCGCGTGGATTGAAACAATGTAAAGGAAGATGATCTATTAGGTATTATTGAGAAAACAAGTGGATCAGATTTCAATTGTTGGAGTGGATCAGTTTTGCATTGTTGCTTACAGCGGGCTATTTAGTTGTGAAACTTTTGATCATCGCCGGACGCCATGATACGGCGATGATCAGTGCCTGACGGCTTAAAACACAGCCTGGCCGTAGAAGGTGCCTGTGGCGCAGAGGCTGACATTTTCCCAGGTGTTGTCTGTATACAGCACTCGGGTGACGCAGGCTGTGGCTTCTGAGAAACCGTGGTTTTCTGGGCCGCCCGGATAAGTTACGCTGCATTGGTTCTTGCTGCCACAACTCCAGTTGCCTTGAGGTTGTGCGCCGTAATTCCATGTCACTTCTGCTACTGGTTTATCTGCCACTAAACGGAAGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGAACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //