Array 1 666674-666401 **** Predicted by CRISPRDetect 2.4 *** >NC_015602.1 Lactobacillus kefiranofaciens subsp. kefiranofaciens, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 666673 29 93.1 32 ..A...........G.............. GACCTCATGGGAATACGGCTCAGTTCTTGAAA 666612 29 100.0 32 ............................. GAATAGCTTAGAAAAAGCACAGCATTAGTTAG 666551 29 100.0 32 ............................. TGAAGTTGATCAGACACAGTACAGTCATTTAG 666490 29 100.0 32 ............................. CAATGAAGTTACGCGCTATACTGATTTTATTC 666429 29 82.8 0 .......................TTCTA. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 32 GTGTTCTCCACGTATGTGGAGGTGATCCT # Left flank : GCTTATAATAAATATAGTCAATTATGGCATAGTATGTATCAAAGTAAAAAGGTAACTAAAGAAGCAATGGAAGCAGCACTTAATACTTTCATGCCGCTATATGAAAAGGCCCCACAAGAAATGCTAGTGGTTGATTCAATGGTTGATAGTTCTCTTGCTGCAATGCAATTTATGCTAGTTGCTCGTGAGCATGGCTATGAAACTAATGCAATGGCTGGATATGATGCTAAGAAGGCGGCAATTGTAATGGGGCTTGATCCTAAACAATATGTTCCAGTAATGGCAATTGCTATTGGTAAGCATGATCCAAAGGCTGAAGCAGAAATTACTACTACTAGATATTCTCTTGCTGATCTTGTTGATTATCAATAAAGTTTTGGAGTAGATTTTAAGTATTCTGTGTAGGGAATTGTAAATTAAGTTAATAATCTAGTTTAGAAAGTGAATAAAAATAAGAGTTTAGCTTTTCAGAAATGGCTTGATTACAAGGATTTTTTACT # Right flank : TCACATAAAAATATCCTCGACTGTAACACTGTAACTGTCGAGGATGTTCATTCTATCGGTCTTTGCTATCTATTAATTTGTAAAATGTCTTCCTTAGCATGAATCAGTTCAGTGACAAACTGGCAATATGGCGTAGCTACACTGTGTTTTAACCCTTTGCGCCAAACTGCACCATCAATATAATCGATTTCAGTTGGTCGATGGTTTTGAATTAAATCTTGATACATTGAAGGATAATGTGGAGTATCAAATAGGCTTTCTACATGTCTAATAACCTCGGCACGATCTAGATTGACGCCTTCATACTGAGCGATATCAGCGAATTCTTGTACAATATGTCTAGTTAAAGTATCCGCTTCATTGGTATGACCATATTCTTTGCAACTAGCTCCCAGCAATGCGCATAAGGCATTAACTACACCGTTAACACAAGCTTTACGCCATATAGAATACATTACGTTTTCGCTATAACTTGCGTTTAAACCGGCATCATCTAAGAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCTCCACGTATGTGGAGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.70,-9.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 2 1688724-1688512 **** Predicted by CRISPRDetect 2.4 *** >NC_015602.1 Lactobacillus kefiranofaciens subsp. kefiranofaciens, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1688723 29 100.0 32 ............................. GGGTGGGCAGTGGTAGGAAAAATTAAATAGCT 1688662 29 100.0 32 ............................. CGAATGGGATCTAAAAGGCCCAAGCCTTGAAG 1688601 29 100.0 32 ............................. TGATATTGACACTACCAATTACAAGTATGTCG 1688540 29 96.6 0 G............................ | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 AGGATCACCTCCACATACGTGGAGAACAC # Left flank : CAGCCGAAAATGTGTCCTGGCTTAAAAATCTAGGTGTCAAATTCAAGGGTGTCGCTACCTTAGGTTCAGGACTTAATACCTGGCATATGTTTAATGGTTTAGGTCGTCATGCAATTCACGATGCACTTGAGCCTTACGCTAAAAAACACAATGTTGAATATATAACTTCAGCTACGGTAACTAAACTTAATCAAGATAGCTCTGACAAGATCACCGGTATAACTATTCAAGATTTTGAAACTAAAAAGGCGAAGAATATCGCAACTAAAGCAGTTATCCTGGCAACTGGTGGATATTTAAATAACCGTGAGATGCTAACTAAATATTTCAACTCTAATTCTAATCGAATTGTACCAATGAACTCTGGTAAAAGCGGTGGCTCAGGACTTAAACTTGCTTGGGCAACCGGTGCTAAAAAATTTAATTTAGGAATGGCTATGATGTTCGGTGGACAAATTAAAGAAGATAAGATTCCATCTTACAAATATTGGAAGACTGAT # Right flank : ACTAAAAGATCCTTGATCTATCAACATTTCTAAATTCTTAGAAGCTCATTTTTATTCAGTTTAGTCAGAATAAAATGAATCCTAGCATTTTTCCCTTTAATTATATCATGCTACCATCATGTACTTAACATCCAAAAAAGGATACCCATCAGGAAAATACATTCCTAATTGAATATCCTTCAATCCTTTTAATTTTTTATCCTGCGAAGCAATTTTATCTAATCAAAGATCCTCACCATTTGAAAGGTAATCCAATAATTTACCTCGTCTTTATAACGAATAAAAATGCAAGAAAAAAGCCTATTGATCTTAGAACTATCAATAGGCAAGCTCAAAAATTTAGTGACTATCTAACCATCCTTTAATACTTTAGCTATGAAATTCAATTTTTGATAAATTGAAGAAACTTTTCCATTTAGAGCAAAAAACATCAAAGTTTAGTTCGATAAATGTTTAGTTCGATAAATTTTTCTAGCTTTTTTAATTCTTTATCAGAAATA # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGATCACCTCCACATACGTGGAGAACAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.40,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //